RNA–Protein interactions for RNA: ENST00000637628.1

CHRNA4-220, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-220ENST00000637628 PTPN23Q9H3S7 1636 aa1.96□□□□□ -2.1
CHRNA4-220ENST00000637628 TRAV22A0A0B4J277 110 aa1.96□□□□□ -2.1
CHRNA4-220ENST00000637628 A0A1W2PNU3 283 aaPredicted RBP1.96□□□□□ -2.1
CHRNA4-220ENST00000637628 ACYP1P07311 99 aa1.96□□□□□ -2.1
CHRNA4-220ENST00000637628 UBE2D1P51668 147 aa1.96□□□□□ -2.1
CHRNA4-220ENST00000637628 UBE2D3P61077 147 aa1.96□□□□□ -2.1
CHRNA4-220ENST00000637628 UBE2D2P62837 147 aa1.96□□□□□ -2.1
CHRNA4-220ENST00000637628 PATE1Q8WXA2 126 aa1.96□□□□□ -2.1
CHRNA4-220ENST00000637628 ODF3Q96PU9 254 aa1.96□□□□□ -2.1
CHRNA4-220ENST00000637628 LIMD2Q9BT23 127 aa1.96□□□□□ -2.1
CHRNA4-220ENST00000637628 EEA1Q15075 1411 aa1.96□□□□□ -2.1
CHRNA4-220ENST00000637628 UNC13BO14795 1591 aa1.96□□□□□ -2.1
CHRNA4-220ENST00000637628 MYO5CQ9NQX4 1742 aa1.96□□□□□ -2.1
CHRNA4-220ENST00000637628 MYO3AQ8NEV4 1616 aa1.95□□□□□ -2.1
CHRNA4-220ENST00000637628 NCOA2Q15596 1464 aa1.95□□□□□ -2.1
CHRNA4-220ENST00000637628 SEC16AO15027 2179 aa1.95□□□□□ -2.1
CHRNA4-220ENST00000637628 INO80Q9ULG1 1556 aaPredicted RBP1.95□□□□□ -2.1
CHRNA4-220ENST00000637628 HFM1A2PYH4 1435 aa1.95□□□□□ -2.1
CHRNA4-220ENST00000637628 IGKV2-28A0A075B6P5 120 aa1.95□□□□□ -2.1
CHRNA4-220ENST00000637628 SDHAF1A6NFY7 115 aa1.95□□□□□ -2.1
CHRNA4-220ENST00000637628 F2Z2F3 143 aa1.95□□□□□ -2.1
CHRNA4-220ENST00000637628 IGKV2D-28P01615 120 aa1.95□□□□□ -2.1
CHRNA4-220ENST00000637628 VMO1Q7Z5L0 202 aa1.95□□□□□ -2.1
CHRNA4-220ENST00000637628 KRTAP11-1Q8IUC1 163 aa1.95□□□□□ -2.1
CHRNA4-220ENST00000637628 DYNLRB1Q9NP97 96 aa1.95□□□□□ -2.1
CHRNA4-220ENST00000637628 ANAPC11Q9NYG5 84 aa1.95□□□□□ -2.1
CHRNA4-220ENST00000637628 PRO0461Q9UI25 63 aa1.95□□□□□ -2.1
CHRNA4-220ENST00000637628 SIP14410 1827 aa1.95□□□□□ -2.1
CHRNA4-220ENST00000637628 SLIT3O75094 1523 aa1.95□□□□□ -2.1
CHRNA4-220ENST00000637628 RGPD8O14715 1765 aaPredicted RBP1.95□□□□□ -2.1
CHRNA4-220ENST00000637628 RGPD5Q99666 1765 aa1.95□□□□□ -2.1
CHRNA4-220ENST00000637628 UBR1Q8IWV7 1749 aa1.94□□□□□ -2.1
CHRNA4-220ENST00000637628 ABCA8O94911 1581 aa1.94□□□□□ -2.1
CHRNA4-220ENST00000637628 BLMP54132 1417 aaPredicted RBP1.94□□□□□ -2.1
CHRNA4-220ENST00000637628 A0A0J9YY99 117 aa1.94□□□□□ -2.1
CHRNA4-220ENST00000637628 ZNF815PA8K554 130 aa1.94□□□□□ -2.1
CHRNA4-220ENST00000637628 TMEM14DPA8MWL7 114 aa1.94□□□□□ -2.1
CHRNA4-220ENST00000637628 PPYP01298 95 aa1.94□□□□□ -2.1
CHRNA4-220ENST00000637628 IGLV6-57P01721 117 aa1.94□□□□□ -2.1
CHRNA4-220ENST00000637628 SMIM13P0DJ93 91 aa1.94□□□□□ -2.1
CHRNA4-220ENST00000637628 SSBP1Q04837 148 aaKnown RBP1.94□□□□□ -2.1
CHRNA4-220ENST00000637628 KLKP1Q107X0 134 aa1.94□□□□□ -2.1
CHRNA4-220ENST00000637628 TMEM170BQ5T4T1 132 aa1.94□□□□□ -2.1
CHRNA4-220ENST00000637628 Q5VV11 94 aa1.94□□□□□ -2.1
CHRNA4-220ENST00000637628 LINC00643Q86TS7 51 aa1.94□□□□□ -2.1
CHRNA4-220ENST00000637628 FAM223AQ8IWN6 122 aa1.94□□□□□ -2.1
CHRNA4-220ENST00000637628 BPESC1Q9GZL8 116 aa1.94□□□□□ -2.1
CHRNA4-220ENST00000637628 STRCP1A6NGW2 1772 aa1.94□□□□□ -2.1
CHRNA4-220ENST00000637628 PCDH15Q96QU1 1955 aa1.94□□□□□ -2.1
CHRNA4-220ENST00000637628 NRXN2Q9P2S2 1712 aa1.94□□□□□ -2.1
CHRNA4-220ENST00000637628 IQSEC2Q5JU85 1478 aa1.94□□□□□ -2.1
CHRNA4-220ENST00000637628 LTBP2Q14767 1821 aa1.94□□□□□ -2.1
CHRNA4-220ENST00000637628 LAMA4Q16363 1823 aa1.94□□□□□ -2.1
CHRNA4-220ENST00000637628 CFAP74Q9C0B2 1584 aa1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 SPTBP11277 2137 aa1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 ABCC1P33527 1531 aa1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 DUOX2Q9NRD8 1548 aa1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 IGKV3-7A0A075B6H7 116 aa1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 TRBV25-1A0A075B6N4 114 aa1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 LOC285095A0A1B0GVY8 99 aa1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 TRBV6-4A0A1B0GX49 114 aa1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 JMJD7-PLA2G4BH0Y9G9 81 aa1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 MT3P25713 68 aa1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 EFNA4P52798 201 aa1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 ELOF1P60002 83 aaKnown RBP1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 GNGT1P63211 74 aa1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 ZNF56Q15929 161 aa1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 TPRXLQ17RH7 258 aa1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 LCE4AQ5TA78 99 aa1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 CFAP126Q5VTH2 177 aa1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 C20orf197Q8N268 126 aa1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 KRTAP9-9Q9BYP9 154 aa1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 PRR34Q9NV39 138 aa1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 KLK9Q9UKQ9 250 aa1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 COL4A5P29400 1685 aa1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 ZNF142P52746 1687 aaPredicted RBP1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 KIF21AQ7Z4S6 1674 aa1.93□□□□□ -2.1
CHRNA4-220ENST00000637628 GBF1Q92538 1859 aa1.92□□□□□ -2.1
CHRNA4-220ENST00000637628 DOCK11Q5JSL3 2073 aa1.92□□□□□ -2.1
CHRNA4-220ENST00000637628 CDK13Q14004 1512 aaKnown RBP1.92□□□□□ -2.1
CHRNA4-220ENST00000637628 ARFGEF1Q9Y6D6 1849 aa1.92□□□□□ -2.1
CHRNA4-220ENST00000637628 TRBV6-7A0A0A0MS04 114 aa1.92□□□□□ -2.1
CHRNA4-220ENST00000637628 LRCOL1A6NCL2 159 aa1.92□□□□□ -2.1
CHRNA4-220ENST00000637628 HIGD1CA8MV81 97 aa1.92□□□□□ -2.1
CHRNA4-220ENST00000637628 UMAD1C9J7I0 102 aa1.92□□□□□ -2.1
CHRNA4-220ENST00000637628 PPP1R17O96001 155 aa1.92□□□□□ -2.1
CHRNA4-220ENST00000637628 DNAL4O96015 105 aa1.92□□□□□ -2.1
CHRNA4-220ENST00000637628 IGHV3-30P01768 117 aa1.92□□□□□ -2.1
CHRNA4-220ENST00000637628 IGHV3-30-5P0DP03 117 aa1.92□□□□□ -2.1
CHRNA4-220ENST00000637628 SPAG11BQ08648 103 aa1.92□□□□□ -2.1
CHRNA4-220ENST00000637628 PSMG4Q5JS54 123 aa1.92□□□□□ -2.1
CHRNA4-220ENST00000637628 SPAG11AQ6PDA7 123 aa1.92□□□□□ -2.1
CHRNA4-220ENST00000637628 TVP23CQ96ET8 276 aa1.92□□□□□ -2.1
CHRNA4-220ENST00000637628 WFDC10AQ9H1F0 79 aa1.92□□□□□ -2.1
CHRNA4-220ENST00000637628 NDUFA4L2Q9NRX3 87 aa1.92□□□□□ -2.1
CHRNA4-220ENST00000637628 RGPD2P0DJD1 1756 aa1.92□□□□□ -2.1
CHRNA4-220ENST00000637628 KCPQ6ZWJ8 1503 aa1.91□□□□□ -2.1
CHRNA4-220ENST00000637628 AFDNP55196 1824 aaKnown RBP1.91□□□□□ -2.1
CHRNA4-220ENST00000637628 MED13Q9UHV7 2174 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms