RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 DPH3Q96FX2 82 aa12.06□□□□□ -0.48
CLN5-218ENST00000637397 LY6LH3BQJ8 138 aa12.06□□□□□ -0.48
CLN5-218ENST00000637397 C20orf203Q8NBC4 194 aa12.06□□□□□ -0.48
CLN5-218ENST00000637397 SPANXB1Q9NS25 103 aaPredicted RBP12.06□□□□□ -0.48
CLN5-218ENST00000637397 GAS8-AS1O95177 125 aa12.06□□□□□ -0.48
CLN5-218ENST00000637397 TRAV26-1A0A087WT03 109 aa12.06□□□□□ -0.48
CLN5-218ENST00000637397 IGHG2P01859 326 aa12.06□□□□□ -0.48
CLN5-218ENST00000637397 PIFOQ8TCI5 191 aa12.06□□□□□ -0.48
CLN5-218ENST00000637397 NEXN-AS1Q8NBZ9 246 aa12.05□□□□□ -0.48
CLN5-218ENST00000637397 CEP295Q9C0D2 2601 aa12.05□□□□□ -0.48
CLN5-218ENST00000637397 J3QLI3 93 aa12.05□□□□□ -0.48
CLN5-218ENST00000637397 FBXL19-AS1Q494R0 122 aa12.05□□□□□ -0.48
CLN5-218ENST00000637397 K7EMT4 169 aa12.05□□□□□ -0.48
CLN5-218ENST00000637397 CEMP1Q6PRD7 247 aaPredicted RBP12.05□□□□□ -0.48
CLN5-218ENST00000637397 NAV2Q8IVL1 2488 aa12.05□□□□□ -0.48
CLN5-218ENST00000637397 A0A096LPF7 62 aa12.04□□□□□ -0.48
CLN5-218ENST00000637397 CLPSL2Q6UWE3 100 aa12.04□□□□□ -0.48
CLN5-218ENST00000637397 ZFAND3Q9H8U3 227 aa12.04□□□□□ -0.48
CLN5-218ENST00000637397 CLEC2BQ92478 149 aa12.04□□□□□ -0.48
CLN5-218ENST00000637397 Q96MF0 132 aa12.04□□□□□ -0.48
CLN5-218ENST00000637397 IGHV3-30-3P0DP02 117 aa12.04□□□□□ -0.48
CLN5-218ENST00000637397 IGHV4OR15-8A0A075B7B6 117 aa12.03□□□□□ -0.48
CLN5-218ENST00000637397 A0A087WW49 117 aa12.03□□□□□ -0.48
CLN5-218ENST00000637397 SLC25A29Q8N8R3 303 aa12.03□□□□□ -0.48
CLN5-218ENST00000637397 ATP6V0E2Q8NHE4 81 aa12.03□□□□□ -0.48
CLN5-218ENST00000637397 C5orf38Q86SI9 138 aa12.03□□□□□ -0.48
CLN5-218ENST00000637397 GPHB5Q86YW7 130 aa12.03□□□□□ -0.48
CLN5-218ENST00000637397 C20orf173Q96LM9 149 aa12.02□□□□□ -0.49
CLN5-218ENST00000637397 A0A0J9YX75 114 aa12.02□□□□□ -0.49
CLN5-218ENST00000637397 TRBV10-2A0A0K0K1G8 114 aa12.02□□□□□ -0.49
CLN5-218ENST00000637397 C10orf105Q8TEF2 133 aa12.02□□□□□ -0.49
CLN5-218ENST00000637397 TNRC6BQ9UPQ9 1833 aaKnown RBP12.02□□□□□ -0.49
CLN5-218ENST00000637397 XCL1P47992 114 aa12.01□□□□□ -0.49
CLN5-218ENST00000637397 UBL5Q9BZL1 73 aa12.01□□□□□ -0.49
CLN5-218ENST00000637397 LMO4P61968 165 aa12.01□□□□□ -0.49
CLN5-218ENST00000637397 HAMPP81172 84 aa12.01□□□□□ -0.49
CLN5-218ENST00000637397 Q71RC1 249 aaPredicted RBP12.01□□□□□ -0.49
CLN5-218ENST00000637397 C11orf21Q9P2W6 132 aa12.01□□□□□ -0.49
CLN5-218ENST00000637397 MT-ATP8P03928 68 aa12.01□□□□□ -0.49
CLN5-218ENST00000637397 Q6ZUT4 128 aa12□□□□□ -0.49
CLN5-218ENST00000637397 ZFAND2AQ8N6M9 145 aa12□□□□□ -0.49
CLN5-218ENST00000637397 IGHV1-58A0A0C4DH39 117 aa12□□□□□ -0.49
CLN5-218ENST00000637397 HERV-K104P63124 156 aa12□□□□□ -0.49
CLN5-218ENST00000637397 SMIM20Q8N5G0 67 aa12□□□□□ -0.49
CLN5-218ENST00000637397 P0DMU3 169 aa11.99□□□□□ -0.49
CLN5-218ENST00000637397 FAM231AP0DMU4 169 aa11.99□□□□□ -0.49
CLN5-218ENST00000637397 FAM231CP0DMU5 169 aa11.99□□□□□ -0.49
CLN5-218ENST00000637397 NRGNQ92686 78 aa11.99□□□□□ -0.49
CLN5-218ENST00000637397 ABCA2Q9BZC7 2435 aa11.99□□□□□ -0.49
CLN5-218ENST00000637397 A0A0J9YY99 117 aa11.99□□□□□ -0.49
CLN5-218ENST00000637397 F5H768 121 aa11.99□□□□□ -0.49
CLN5-218ENST00000637397 SND1-IT1Q9HBX3 110 aa11.99□□□□□ -0.49
CLN5-218ENST00000637397 HIVEP3Q5T1R4 2406 aa11.99□□□□□ -0.49
CLN5-218ENST00000637397 LGALS9O00182 355 aa11.99□□□□□ -0.49
CLN5-218ENST00000637397 CRLF1O75462 422 aa11.99□□□□□ -0.49
CLN5-218ENST00000637397 EBI3Q14213 229 aa11.99□□□□□ -0.49
CLN5-218ENST00000637397 ACYP1P07311 99 aa11.98□□□□□ -0.49
CLN5-218ENST00000637397 VSIG2Q96IQ7 327 aa11.98□□□□□ -0.49
CLN5-218ENST00000637397 NRACQ8N912 160 aa11.98□□□□□ -0.49
CLN5-218ENST00000637397 ANGP03950 147 aaKnown RBP11.98□□□□□ -0.49
CLN5-218ENST00000637397 FAM236AA0A1B0GUQ0 79 aa11.97□□□□□ -0.49
CLN5-218ENST00000637397 FAM236BA0A1B0GV22 79 aa11.97□□□□□ -0.49
CLN5-218ENST00000637397 EXPH5Q8NEV8 1989 aa11.97□□□□□ -0.49
CLN5-218ENST00000637397 COL5A1P20908 1838 aaPredicted RBP11.97□□□□□ -0.49
CLN5-218ENST00000637397 A0A0J9YXY3 114 aa11.97□□□□□ -0.49
CLN5-218ENST00000637397 SPANXDQ9BXN6 97 aa11.97□□□□□ -0.49
CLN5-218ENST00000637397 H3BT86 120 aa11.97□□□□□ -0.49
CLN5-218ENST00000637397 DAD1P61803 113 aa11.97□□□□□ -0.49
CLN5-218ENST00000637397 C3orf56Q8N813 242 aa11.96□□□□□ -0.49
CLN5-218ENST00000637397 TRBV7-3A0A075B6L6 115 aa11.96□□□□□ -0.5
CLN5-218ENST00000637397 TLN2Q9Y4G6 2542 aa11.96□□□□□ -0.5
CLN5-218ENST00000637397 FSTL3O95633 263 aa11.96□□□□□ -0.5
CLN5-218ENST00000637397 A6NDX4 124 aa11.95□□□□□ -0.5
CLN5-218ENST00000637397 CCL24O00175 119 aa11.95□□□□□ -0.5
CLN5-218ENST00000637397 RNF183Q96D59 192 aa11.95□□□□□ -0.5
CLN5-218ENST00000637397 PRO3102Q9H379 93 aa11.95□□□□□ -0.5
CLN5-218ENST00000637397 K7EQD1 137 aa11.95□□□□□ -0.5
CLN5-218ENST00000637397 TMEM61Q8N0U2 210 aa11.95□□□□□ -0.5
CLN5-218ENST00000637397 SETD2Q9BYW2 2564 aaPredicted RBP11.95□□□□□ -0.5
CLN5-218ENST00000637397 TRACP01848 142 aa11.95□□□□□ -0.5
CLN5-218ENST00000637397 RNF152Q8N8N0 203 aa11.95□□□□□ -0.5
CLN5-218ENST00000637397 NFE4Q86UQ8 179 aa11.95□□□□□ -0.5
CLN5-218ENST00000637397 PRR9Q5T870 116 aa11.94□□□□□ -0.5
CLN5-218ENST00000637397 TRAV4A0A0B4J268 109 aa11.94□□□□□ -0.5
CLN5-218ENST00000637397 TEX49A0A1B0GTD5 131 aa11.94□□□□□ -0.5
CLN5-218ENST00000637397 BPTFQ12830 3046 aa11.94□□□□□ -0.5
CLN5-218ENST00000637397 PIEZO1Q92508 2521 aa11.94□□□□□ -0.5
CLN5-218ENST00000637397 DAZ2Q13117 558 aaKnown RBP11.94□□□□□ -0.5
CLN5-218ENST00000637397 Q6ZQT7 251 aa11.94□□□□□ -0.5
CLN5-218ENST00000637397 DAZ4Q86SG3 579 aaKnown RBP11.94□□□□□ -0.5
CLN5-218ENST00000637397 DAZ3Q9NR90 486 aaKnown RBP11.94□□□□□ -0.5
CLN5-218ENST00000637397 HHLA3Q9XRX5 114 aa11.94□□□□□ -0.5
CLN5-218ENST00000637397 ZNF561-AS1K7EIQ3 104 aa11.93□□□□□ -0.5
CLN5-218ENST00000637397 ZNF22P17026 224 aaPredicted RBP11.93□□□□□ -0.5
CLN5-218ENST00000637397 ORMDL1Q9P0S3 153 aa11.93□□□□□ -0.5
CLN5-218ENST00000637397 USP9XQ93008 2570 aaPredicted RBP11.93□□□□□ -0.5
CLN5-218ENST00000637397 TMEM126AQ9H061 195 aa11.93□□□□□ -0.5
CLN5-218ENST00000637397 HIVEP2P31629 2446 aa11.93□□□□□ -0.5
CLN5-218ENST00000637397 A0A0B4J2C4 111 aa11.93□□□□□ -0.5
CLN5-218ENST00000637397 IGKV3D-7A0A0C4DH55 119 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms