RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.67□□□□□ -0.38
CACNA1A-238ENST00000637276 SNURFQ9Y675 71 aa12.67□□□□□ -0.38
CACNA1A-238ENST00000637276 FNDC1Q4ZHG4 1894 aaPredicted RBP12.66□□□□□ -0.38
CACNA1A-238ENST00000637276 TP53TG3Q9ULZ0 132 aa12.66□□□□□ -0.38
CACNA1A-238ENST00000637276 LYL1P12980 280 aa12.66□□□□□ -0.38
CACNA1A-238ENST00000637276 Q6ZVQ6 151 aa12.66□□□□□ -0.38
CACNA1A-238ENST00000637276 LGALS9O00182 355 aa12.66□□□□□ -0.38
CACNA1A-238ENST00000637276 PRYO14603 147 aa12.66□□□□□ -0.38
CACNA1A-238ENST00000637276 SLX1AQ9BQ83 275 aa12.66□□□□□ -0.38
CACNA1A-238ENST00000637276 PYGO2Q9BRQ0 406 aa12.66□□□□□ -0.38
CACNA1A-238ENST00000637276 FHL1Q13642 323 aa12.66□□□□□ -0.38
CACNA1A-238ENST00000637276 C22orf34Q6ZV56 151 aa12.66□□□□□ -0.38
CACNA1A-238ENST00000637276 C7orf33Q8WU49 177 aa12.66□□□□□ -0.38
CACNA1A-238ENST00000637276 CIRBP-AS1Q8TBR5 109 aa12.66□□□□□ -0.38
CACNA1A-238ENST00000637276 FGF23Q9GZV9 251 aaPredicted RBP12.66□□□□□ -0.38
CACNA1A-238ENST00000637276 ZFAND3Q9H8U3 227 aa12.66□□□□□ -0.38
CACNA1A-238ENST00000637276 COX7BP24311 80 aa12.65□□□□□ -0.38
CACNA1A-238ENST00000637276 IGHV2-70P01814 119 aa12.65□□□□□ -0.38
CACNA1A-238ENST00000637276 KAAG1Q9UBP8 84 aa12.65□□□□□ -0.38
CACNA1A-238ENST00000637276 AGPAT4-IT1Q9H0P7 198 aa12.65□□□□□ -0.38
CACNA1A-238ENST00000637276 FRMPD3Q5JV73 1810 aa12.65□□□□□ -0.39
CACNA1A-238ENST00000637276 DEFB131BA0A096LNP1 70 aa12.64□□□□□ -0.39
CACNA1A-238ENST00000637276 DAZ2Q13117 558 aaKnown RBP12.64□□□□□ -0.39
CACNA1A-238ENST00000637276 DAZ4Q86SG3 579 aaKnown RBP12.64□□□□□ -0.39
CACNA1A-238ENST00000637276 DAZ3Q9NR90 486 aaKnown RBP12.64□□□□□ -0.39
CACNA1A-238ENST00000637276 PTPN13Q12923 2485 aa12.64□□□□□ -0.39
CACNA1A-238ENST00000637276 WDR90Q96KV7 1748 aa12.64□□□□□ -0.39
CACNA1A-238ENST00000637276 CENPVL3A0A0U1RRI6 287 aa12.64□□□□□ -0.39
CACNA1A-238ENST00000637276 MDFICQ9P1T7 246 aa12.64□□□□□ -0.39
CACNA1A-238ENST00000637276 TET2Q6N021 2002 aaPredicted RBP12.64□□□□□ -0.39
CACNA1A-238ENST00000637276 FNDC10F2Z333 226 aa12.64□□□□□ -0.39
CACNA1A-238ENST00000637276 PRR15LQ9BU68 103 aa12.64□□□□□ -0.39
CACNA1A-238ENST00000637276 ZNF524Q96C55 264 aa12.63□□□□□ -0.39
CACNA1A-238ENST00000637276 BPY2O14599 106 aa12.63□□□□□ -0.39
CACNA1A-238ENST00000637276 TRBV7-3A0A075B6L6 115 aa12.63□□□□□ -0.39
CACNA1A-238ENST00000637276 IGF1P05019 195 aa12.63□□□□□ -0.39
CACNA1A-238ENST00000637276 NDUFV3P56181 108 aaKnown RBP12.63□□□□□ -0.39
CACNA1A-238ENST00000637276 KIR2DL5BQ8NHK3 375 aa12.62□□□□□ -0.39
CACNA1A-238ENST00000637276 NFE4Q86UQ8 179 aa12.62□□□□□ -0.39
CACNA1A-238ENST00000637276 KIF26AQ9ULI4 1882 aaPredicted RBP12.62□□□□□ -0.39
CACNA1A-238ENST00000637276 PRAC2D3DTV9 90 aa12.62□□□□□ -0.39
CACNA1A-238ENST00000637276 SRCAPQ6ZRS2 3230 aa12.61□□□□□ -0.39
CACNA1A-238ENST00000637276 PTH2Q96A98 100 aa12.61□□□□□ -0.39
CACNA1A-238ENST00000637276 IGLC1P0CG04 106 aa12.61□□□□□ -0.39
CACNA1A-238ENST00000637276 C15orf65H3BRN8 121 aa12.61□□□□□ -0.39
CACNA1A-238ENST00000637276 ZSWIM8A7E2V4 1837 aa12.6□□□□□ -0.39
CACNA1A-238ENST00000637276 KIAA1671Q9BY89 1806 aa12.6□□□□□ -0.39
CACNA1A-238ENST00000637276 C2orf70A6NJV1 201 aa12.6□□□□□ -0.39
CACNA1A-238ENST00000637276 ENHOQ6UWT2 76 aa12.6□□□□□ -0.39
CACNA1A-238ENST00000637276 C17orf82Q86X59 251 aaPredicted RBP12.6□□□□□ -0.39
CACNA1A-238ENST00000637276 TMEM89A2RUT3 159 aa12.6□□□□□ -0.39
CACNA1A-238ENST00000637276 A6NED7 52 aa12.6□□□□□ -0.39
CACNA1A-238ENST00000637276 MRPL55Q7Z7F7 128 aaKnown RBP12.59□□□□□ -0.39
CACNA1A-238ENST00000637276 DNAJC9-AS1A6NH13 148 aa12.59□□□□□ -0.39
CACNA1A-238ENST00000637276 C20orf144Q9BQM9 153 aa12.59□□□□□ -0.39
CACNA1A-238ENST00000637276 SERP2Q8N6R1 65 aa12.59□□□□□ -0.39
CACNA1A-238ENST00000637276 BDP1A6H8Y1 2624 aa12.58□□□□□ -0.39
CACNA1A-238ENST00000637276 IGHV1-58A0A0C4DH39 117 aa12.58□□□□□ -0.4
CACNA1A-238ENST00000637276 PROK2Q9HC23 129 aa12.58□□□□□ -0.4
CACNA1A-238ENST00000637276 WFDC2Q14508 124 aa12.58□□□□□ -0.4
CACNA1A-238ENST00000637276 RNF152Q8N8N0 203 aa12.58□□□□□ -0.4
CACNA1A-238ENST00000637276 CTSZQ9UBR2 303 aa12.58□□□□□ -0.4
CACNA1A-238ENST00000637276 OTOGLQ3ZCN5 2332 aa12.58□□□□□ -0.4
CACNA1A-238ENST00000637276 LINC01620Q4KN68 170 aa12.58□□□□□ -0.4
CACNA1A-238ENST00000637276 Q6ZUT4 128 aa12.57□□□□□ -0.4
CACNA1A-238ENST00000637276 TMEM14CQ9P0S9 112 aa12.57□□□□□ -0.4
CACNA1A-238ENST00000637276 DOPEY1Q5JWR5 2465 aa12.57□□□□□ -0.4
CACNA1A-238ENST00000637276 TEN1Q86WV5 123 aa12.57□□□□□ -0.4
CACNA1A-238ENST00000637276 TDRG1Q3Y452 100 aa12.57□□□□□ -0.4
CACNA1A-238ENST00000637276 EXPH5Q8NEV8 1989 aa12.57□□□□□ -0.4
CACNA1A-238ENST00000637276 PLXNA3P51805 1871 aa12.57□□□□□ -0.4
CACNA1A-238ENST00000637276 C11orf52Q96A22 123 aa12.56□□□□□ -0.4
CACNA1A-238ENST00000637276 PIK3CD-AS1Q5SR53 167 aa12.56□□□□□ -0.4
CACNA1A-238ENST00000637276 WT1P19544 449 aaPredicted RBP12.56□□□□□ -0.4
CACNA1A-238ENST00000637276 REG3AQ06141 175 aa12.56□□□□□ -0.4
CACNA1A-238ENST00000637276 IGLV2-14P01704 120 aa12.55□□□□□ -0.4
CACNA1A-238ENST00000637276 Q8TCH9 128 aa12.55□□□□□ -0.4
CACNA1A-238ENST00000637276 FAM222AQ5U5X8 452 aa12.55□□□□□ -0.4
CACNA1A-238ENST00000637276 C20orf78Q9BR46 151 aa12.55□□□□□ -0.4
CACNA1A-238ENST00000637276 HILS1P60008 231 aa12.55□□□□□ -0.4
CACNA1A-238ENST00000637276 MGAMO43451 1857 aa12.55□□□□□ -0.4
CACNA1A-238ENST00000637276 FAM215AQ9Y5M1 114 aa12.54□□□□□ -0.4
CACNA1A-238ENST00000637276 Q6ZS49 121 aa12.54□□□□□ -0.4
CACNA1A-238ENST00000637276 NUPR1O60356 82 aa12.54□□□□□ -0.4
CACNA1A-238ENST00000637276 ZFHX2Q9C0A1 2572 aaPredicted RBP12.54□□□□□ -0.4
CACNA1A-238ENST00000637276 PRRC2AP48634 2157 aaKnown RBP12.54□□□□□ -0.4
CACNA1A-238ENST00000637276 TAX1BP3O14907 124 aa12.54□□□□□ -0.4
CACNA1A-238ENST00000637276 C20orf197Q8N268 126 aa12.54□□□□□ -0.4
CACNA1A-238ENST00000637276 NLRC5Q86WI3 1866 aa12.53□□□□□ -0.4
CACNA1A-238ENST00000637276 OBSL1O75147 1896 aa12.53□□□□□ -0.4
CACNA1A-238ENST00000637276 CRIPAKQ8N1N5 446 aa12.53□□□□□ -0.4
CACNA1A-238ENST00000637276 PRM2P04554 102 aa12.53□□□□□ -0.4
CACNA1A-238ENST00000637276 ZNF747Q9BV97 191 aa12.52□□□□□ -0.4
CACNA1A-238ENST00000637276 SPANXA1Q9NS26 97 aa12.52□□□□□ -0.4
CACNA1A-238ENST00000637276 G3V4G9 280 aa12.52□□□□□ -0.41
CACNA1A-238ENST00000637276 FOXL2NBQ6ZUU3 175 aa12.52□□□□□ -0.41
CACNA1A-238ENST00000637276 C10orf105Q8TEF2 133 aa12.52□□□□□ -0.41
CACNA1A-238ENST00000637276 TMEM256-PLSCR3K7ERE1 68 aa12.52□□□□□ -0.41
CACNA1A-238ENST00000637276 Q6ZTI0 123 aa12.52□□□□□ -0.41
CACNA1A-238ENST00000637276 NOTCH2Q04721 2471 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms