RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 GAGE12IP0CL82 117 aa11.71□□□□□ -0.53
CACNA1A-235ENST00000637004 CRIP2P52943 208 aaPredicted RBP11.71□□□□□ -0.53
CACNA1A-235ENST00000637004 RPL39P62891 51 aaKnown RBP11.71□□□□□ -0.53
CACNA1A-235ENST00000637004 GAGE4Q13068 117 aa11.71□□□□□ -0.53
CACNA1A-235ENST00000637004 VPREB3Q9UKI3 123 aa11.71□□□□□ -0.53
CACNA1A-235ENST00000637004 KIF25-AS1Q9Y6Z4 181 aa11.71□□□□□ -0.53
CACNA1A-235ENST00000637004 IFITM1P13164 125 aa11.71□□□□□ -0.54
CACNA1A-235ENST00000637004 Q8N1Y9 231 aa11.71□□□□□ -0.54
CACNA1A-235ENST00000637004 ANKHD1Q8IWZ3 2542 aaKnown RBP11.71□□□□□ -0.54
CACNA1A-235ENST00000637004 LINC00315P59091 139 aa11.7□□□□□ -0.54
CACNA1A-235ENST00000637004 NTN5Q8WTR8 489 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-235ENST00000637004 LINC01600Q96MT4 127 aa11.7□□□□□ -0.54
CACNA1A-235ENST00000637004 LEPROTO15243 131 aa11.7□□□□□ -0.54
CACNA1A-235ENST00000637004 TRAV4A0A0B4J268 109 aa11.69□□□□□ -0.54
CACNA1A-235ENST00000637004 Q1RN00 199 aa11.69□□□□□ -0.54
CACNA1A-235ENST00000637004 LINC01620Q4KN68 170 aa11.69□□□□□ -0.54
CACNA1A-235ENST00000637004 APRG1Q8IVJ8 170 aa11.69□□□□□ -0.54
CACNA1A-235ENST00000637004 FAM19A4Q96LR4 140 aa11.69□□□□□ -0.54
CACNA1A-235ENST00000637004 H7C2G1 150 aa11.69□□□□□ -0.54
CACNA1A-235ENST00000637004 RPL13AP40429 203 aaKnown RBP11.69□□□□□ -0.54
CACNA1A-235ENST00000637004 SPANXA1Q9NS26 97 aa11.69□□□□□ -0.54
CACNA1A-235ENST00000637004 TRAV2A0A0B4J234 112 aa11.68□□□□□ -0.54
CACNA1A-235ENST00000637004 SUMO4Q6EEV6 95 aa11.68□□□□□ -0.54
CACNA1A-235ENST00000637004 SDHAF1A6NFY7 115 aa11.68□□□□□ -0.54
CACNA1A-235ENST00000637004 PPDPFQ9H3Y8 114 aa11.68□□□□□ -0.54
CACNA1A-235ENST00000637004 TRAV8-4A0A0B4J246 113 aa11.68□□□□□ -0.54
CACNA1A-235ENST00000637004 TRBV27A0A0K0K1C4 114 aa11.68□□□□□ -0.54
CACNA1A-235ENST00000637004 BAHCC1Q9P281 2608 aa11.67□□□□□ -0.54
CACNA1A-235ENST00000637004 TMEM223A0PJW6 202 aa11.67□□□□□ -0.54
CACNA1A-235ENST00000637004 F5H697 171 aa11.67□□□□□ -0.54
CACNA1A-235ENST00000637004 PLA2G2AP14555 144 aa11.67□□□□□ -0.54
CACNA1A-235ENST00000637004 MUSTN1Q8IVN3 82 aa11.67□□□□□ -0.54
CACNA1A-235ENST00000637004 ASH1LQ9NR48 2969 aaKnown RBP11.67□□□□□ -0.54
CACNA1A-235ENST00000637004 SETXQ7Z333 2677 aaKnown RBP11.67□□□□□ -0.54
CACNA1A-235ENST00000637004 TRBV10-2A0A0K0K1G8 114 aa11.67□□□□□ -0.54
CACNA1A-235ENST00000637004 SOCS3O14543 225 aa11.67□□□□□ -0.54
CACNA1A-235ENST00000637004 IGHV1-69P01742 117 aa11.67□□□□□ -0.54
CACNA1A-235ENST00000637004 FAM223BA6NKX1 122 aa11.66□□□□□ -0.54
CACNA1A-235ENST00000637004 EIF4EBP3O60516 100 aaPredicted RBP11.66□□□□□ -0.54
CACNA1A-235ENST00000637004 CRLF1O75462 422 aa11.66□□□□□ -0.54
CACNA1A-235ENST00000637004 GRNP28799 593 aaKnown RBP11.66□□□□□ -0.54
CACNA1A-235ENST00000637004 FAM223AQ8IWN6 122 aa11.66□□□□□ -0.54
CACNA1A-235ENST00000637004 TRBV6-5A0A0K0K1A5 114 aa11.66□□□□□ -0.54
CACNA1A-235ENST00000637004 ADORA2A-AS1P86434 159 aa11.66□□□□□ -0.54
CACNA1A-235ENST00000637004 A0A0J9YX75 114 aa11.65□□□□□ -0.54
CACNA1A-235ENST00000637004 DEFB104AQ8WTQ1 72 aa11.65□□□□□ -0.54
CACNA1A-235ENST00000637004 SIRPDQ9H106 197 aa11.65□□□□□ -0.54
CACNA1A-235ENST00000637004 TRBV30A0A0K0K1B3 111 aa11.65□□□□□ -0.54
CACNA1A-235ENST00000637004 CCDC179H3BU77 68 aa11.65□□□□□ -0.54
CACNA1A-235ENST00000637004 UBE2E1P51965 193 aa11.65□□□□□ -0.54
CACNA1A-235ENST00000637004 C5orf47Q569G3 176 aa11.65□□□□□ -0.54
CACNA1A-235ENST00000637004 FAM159AQ6UWV7 190 aa11.65□□□□□ -0.54
CACNA1A-235ENST00000637004 H3BMM0 161 aa11.64□□□□□ -0.55
CACNA1A-235ENST00000637004 M0R2P5 195 aa11.64□□□□□ -0.55
CACNA1A-235ENST00000637004 IGHV4-39P01824 125 aa11.64□□□□□ -0.55
CACNA1A-235ENST00000637004 RHOHQ15669 191 aa11.64□□□□□ -0.55
CACNA1A-235ENST00000637004 UBE2WQ96B02 151 aa11.64□□□□□ -0.55
CACNA1A-235ENST00000637004 TEX49A0A1B0GTD5 131 aa11.64□□□□□ -0.55
CACNA1A-235ENST00000637004 DEFB1P60022 68 aa11.64□□□□□ -0.55
CACNA1A-235ENST00000637004 ODF3Q96PU9 254 aa11.64□□□□□ -0.55
CACNA1A-235ENST00000637004 A0A087WWL8 130 aa11.64□□□□□ -0.55
CACNA1A-235ENST00000637004 NDUFA4O00483 81 aa11.64□□□□□ -0.55
CACNA1A-235ENST00000637004 ZFP36P26651 326 aaKnown RBP11.64□□□□□ -0.55
CACNA1A-235ENST00000637004 RPL11P62913 178 aaKnown RBP11.64□□□□□ -0.55
CACNA1A-235ENST00000637004 HIST2H2BCQ6DN03 193 aa11.64□□□□□ -0.55
CACNA1A-235ENST00000637004 C15orf53Q8NAA6 179 aa11.64□□□□□ -0.55
CACNA1A-235ENST00000637004 J3QKU1 62 aa11.63□□□□□ -0.55
CACNA1A-235ENST00000637004 LGALS9O00182 355 aa11.63□□□□□ -0.55
CACNA1A-235ENST00000637004 NSUN5P1Q3KNT7 163 aa11.63□□□□□ -0.55
CACNA1A-235ENST00000637004 JPT2Q9H910 190 aa11.63□□□□□ -0.55
CACNA1A-235ENST00000637004 F6UB75 175 aa11.63□□□□□ -0.55
CACNA1A-235ENST00000637004 MRPL23Q16540 153 aaKnown RBP11.63□□□□□ -0.55
CACNA1A-235ENST00000637004 ZNF256Q9Y2P7 627 aaPredicted RBP11.63□□□□□ -0.55
CACNA1A-235ENST00000637004 TRAV41A0A0B4J266 112 aa11.62□□□□□ -0.55
CACNA1A-235ENST00000637004 ELANEP08246 267 aa11.62□□□□□ -0.55
CACNA1A-235ENST00000637004 ZNF22P17026 224 aaPredicted RBP11.62□□□□□ -0.55
CACNA1A-235ENST00000637004 UNQ9165/PRO28630Q6UXU0 137 aa11.62□□□□□ -0.55
CACNA1A-235ENST00000637004 ITPR2Q14571 2701 aa11.62□□□□□ -0.55
CACNA1A-235ENST00000637004 HRNRQ86YZ3 2850 aaPredicted RBP11.62□□□□□ -0.55
CACNA1A-235ENST00000637004 SAA4P35542 130 aa11.62□□□□□ -0.55
CACNA1A-235ENST00000637004 C5orf56Q8N8D9 126 aa11.62□□□□□ -0.55
CACNA1A-235ENST00000637004 BEX4Q9NWD9 120 aaPredicted RBP11.62□□□□□ -0.55
CACNA1A-235ENST00000637004 C2orf82Q6UX34 121 aa11.61□□□□□ -0.55
CACNA1A-235ENST00000637004 MDFICQ9P1T7 246 aa11.61□□□□□ -0.55
CACNA1A-235ENST00000637004 KLLNB2CW77 178 aa11.61□□□□□ -0.55
CACNA1A-235ENST00000637004 TRIAP1O43715 76 aa11.61□□□□□ -0.55
CACNA1A-235ENST00000637004 VPS13CQ709C8 3753 aa11.6□□□□□ -0.55
CACNA1A-235ENST00000637004 A0A0J9YXY3 114 aa11.6□□□□□ -0.55
CACNA1A-235ENST00000637004 COX6CP09669 75 aa11.6□□□□□ -0.55
CACNA1A-235ENST00000637004 FBXL19-AS1Q494R0 122 aa11.6□□□□□ -0.55
CACNA1A-235ENST00000637004 CSDC2Q9Y534 153 aaKnown RBP11.6□□□□□ -0.55
CACNA1A-235ENST00000637004 IGHV3-64A0A075B6Q5 118 aa11.6□□□□□ -0.55
CACNA1A-235ENST00000637004 TRAV25A0A0B4J276 109 aa11.6□□□□□ -0.55
CACNA1A-235ENST00000637004 H3BT86 120 aa11.6□□□□□ -0.55
CACNA1A-235ENST00000637004 CCDC168Q8NDH2 2452 aa11.59□□□□□ -0.55
CACNA1A-235ENST00000637004 FAM74A4Q5TZK3 123 aa11.59□□□□□ -0.55
CACNA1A-235ENST00000637004 OPRPNQ99935 248 aaPredicted RBP11.59□□□□□ -0.55
CACNA1A-235ENST00000637004 FBN2P35556 2912 aa11.59□□□□□ -0.55
CACNA1A-235ENST00000637004 MUC4Q99102 2169 aa11.59□□□□□ -0.55
CACNA1A-235ENST00000637004 C19orf84I3L1E1 186 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms