RNA–Protein interactions for RNA: ENST00000636945.2

SCN8A-212, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 3,578 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-212ENST00000636945 IGHV3-66A0A0C4DH42 116 aa5.76□□□□□ -1.49
SCN8A-212ENST00000636945 B9A039 149 aa5.76□□□□□ -1.49
SCN8A-212ENST00000636945 GNRH2O43555 120 aa5.76□□□□□ -1.49
SCN8A-212ENST00000636945 RPS28P62857 69 aaKnown RBP5.76□□□□□ -1.49
SCN8A-212ENST00000636945 C19orf54Q5BKX5 351 aa5.76□□□□□ -1.49
SCN8A-212ENST00000636945 DYNLRB1Q9NP97 96 aa5.76□□□□□ -1.49
SCN8A-212ENST00000636945 MGAQ8IWI9 3026 aa5.75□□□□□ -1.49
SCN8A-212ENST00000636945 TRGV11A0A075B6L2 103 aa5.75□□□□□ -1.49
SCN8A-212ENST00000636945 KLLNB2CW77 178 aa5.75□□□□□ -1.49
SCN8A-212ENST00000636945 UQCRQO14949 82 aa5.75□□□□□ -1.49
SCN8A-212ENST00000636945 WIPF1O43516 503 aa5.75□□□□□ -1.49
SCN8A-212ENST00000636945 SMCR5Q8TEV8 140 aa5.75□□□□□ -1.49
SCN8A-212ENST00000636945 PRRC2CQ9Y520 2896 aaKnown RBP5.75□□□□□ -1.49
SCN8A-212ENST00000636945 CD3EP07766 207 aa5.75□□□□□ -1.49
SCN8A-212ENST00000636945 LINC00694P0DN24 101 aa5.75□□□□□ -1.49
SCN8A-212ENST00000636945 ID1P41134 155 aa5.75□□□□□ -1.49
SCN8A-212ENST00000636945 MRPS36P82909 103 aaKnown RBP5.75□□□□□ -1.49
SCN8A-212ENST00000636945 ADAMTSL4-AS1Q5T5F5 129 aa5.75□□□□□ -1.49
SCN8A-212ENST00000636945 MINOS1Q5TGZ0 78 aa5.75□□□□□ -1.49
SCN8A-212ENST00000636945 C2orf48Q96LS8 159 aa5.75□□□□□ -1.49
SCN8A-212ENST00000636945 DUX3Q96PT4 197 aa5.75□□□□□ -1.49
SCN8A-212ENST00000636945 MINOS1-NBL1R4GNA1 71 aa5.75□□□□□ -1.49
SCN8A-212ENST00000636945 TIMM17BO60830 172 aa5.75□□□□□ -1.49
SCN8A-212ENST00000636945 CXCL5P42830 114 aa5.75□□□□□ -1.49
SCN8A-212ENST00000636945 MIAQ16674 131 aa5.75□□□□□ -1.49
SCN8A-212ENST00000636945 CEMP1Q6PRD7 247 aaPredicted RBP5.75□□□□□ -1.49
SCN8A-212ENST00000636945 TMEM61Q8N0U2 210 aa5.75□□□□□ -1.49
SCN8A-212ENST00000636945 ZNF580Q9UK33 172 aa5.75□□□□□ -1.49
SCN8A-212ENST00000636945 ICE1Q9Y2F5 2266 aa5.74□□□□□ -1.49
SCN8A-212ENST00000636945 IGLV4-3A0A075B6K6 122 aa5.74□□□□□ -1.49
SCN8A-212ENST00000636945 IGHV3-30-3P0DP02 117 aa5.74□□□□□ -1.49
SCN8A-212ENST00000636945 S100A4P26447 101 aaKnown RBP5.74□□□□□ -1.49
SCN8A-212ENST00000636945 C20orf203Q8NBC4 194 aa5.74□□□□□ -1.49
SCN8A-212ENST00000636945 PYGO1Q9Y3Y4 419 aa5.74□□□□□ -1.49
SCN8A-212ENST00000636945 LYNX1G3V0Z9 82 aa5.74□□□□□ -1.49
SCN8A-212ENST00000636945 H7C2G1 150 aa5.74□□□□□ -1.49
SCN8A-212ENST00000636945 I3L3M4 83 aa5.74□□□□□ -1.49
SCN8A-212ENST00000636945 M0QY20 66 aa5.74□□□□□ -1.49
SCN8A-212ENST00000636945 LYNX1P0DP58 116 aa5.74□□□□□ -1.49
SCN8A-212ENST00000636945 BEAN1Q3B7T3 259 aa5.74□□□□□ -1.49
SCN8A-212ENST00000636945 LINC00643Q86TS7 51 aa5.74□□□□□ -1.49
SCN8A-212ENST00000636945 C16orf92Q96LL3 132 aa5.74□□□□□ -1.49
SCN8A-212ENST00000636945 EDA2RQ9HAV5 297 aa5.74□□□□□ -1.49
SCN8A-212ENST00000636945 FAM236AA0A1B0GUQ0 79 aa5.73□□□□□ -1.49
SCN8A-212ENST00000636945 FAM236BA0A1B0GV22 79 aa5.73□□□□□ -1.49
SCN8A-212ENST00000636945 C5orf47Q569G3 176 aa5.73□□□□□ -1.49
SCN8A-212ENST00000636945 CLEC19AQ6UXS0 136 aa5.73□□□□□ -1.49
SCN8A-212ENST00000636945 EEF1AKMT3Q96AZ1 226 aa5.73□□□□□ -1.49
SCN8A-212ENST00000636945 C9orf85Q96MD7 179 aa5.73□□□□□ -1.49
SCN8A-212ENST00000636945 C22orf24Q9Y442 160 aa5.73□□□□□ -1.49
SCN8A-212ENST00000636945 ASPMQ8IZT6 3477 aa5.73□□□□□ -1.49
SCN8A-212ENST00000636945 J3QKU1 62 aa5.73□□□□□ -1.49
SCN8A-212ENST00000636945 CRYGAP11844 174 aa5.73□□□□□ -1.49
SCN8A-212ENST00000636945 OPRPNQ99935 248 aaPredicted RBP5.73□□□□□ -1.49
SCN8A-212ENST00000636945 ATP6V0E1O15342 81 aa5.73□□□□□ -1.49
SCN8A-212ENST00000636945 COX6CP09669 75 aa5.73□□□□□ -1.49
SCN8A-212ENST00000636945 PLA2G2AP14555 144 aa5.73□□□□□ -1.49
SCN8A-212ENST00000636945 Q1RN00 199 aa5.73□□□□□ -1.49
SCN8A-212ENST00000636945 CLEC2BQ92478 149 aa5.73□□□□□ -1.49
SCN8A-212ENST00000636945 JPT2Q9H910 190 aa5.73□□□□□ -1.49
SCN8A-212ENST00000636945 IGHV3OR16-13A0A075B7E8 117 aa5.72□□□□□ -1.49
SCN8A-212ENST00000636945 IGHV3-74A0A0B4J1X5 117 aa5.72□□□□□ -1.49
SCN8A-212ENST00000636945 A0A0J9YXV3 536 aa5.72□□□□□ -1.49
SCN8A-212ENST00000636945 ZNF462Q96JM2 2506 aa5.72□□□□□ -1.49
SCN8A-212ENST00000636945 IGHV1-58A0A0C4DH39 117 aa5.72□□□□□ -1.49
SCN8A-212ENST00000636945 NPFFO15130 113 aa5.72□□□□□ -1.49
SCN8A-212ENST00000636945 ZNF256Q9Y2P7 627 aaPredicted RBP5.72□□□□□ -1.49
SCN8A-212ENST00000636945 ARHGAP32A7KAX9 2087 aa5.72□□□□□ -1.49
SCN8A-212ENST00000636945 Q8NA96 180 aa5.72□□□□□ -1.49
SCN8A-212ENST00000636945 CITED2Q99967 270 aaPredicted RBP5.72□□□□□ -1.49
SCN8A-212ENST00000636945 CSMD1Q96PZ7 3565 aa5.72□□□□□ -1.49
SCN8A-212ENST00000636945 FASNP49327 2511 aaKnown RBP5.71□□□□□ -1.49
SCN8A-212ENST00000636945 HERVK_113P63121 156 aa5.71□□□□□ -1.49
SCN8A-212ENST00000636945 BEX4Q9NWD9 120 aaPredicted RBP5.71□□□□□ -1.49
SCN8A-212ENST00000636945 PEMTQ9UBM1 199 aa5.71□□□□□ -1.49
SCN8A-212ENST00000636945 RP1L1Q8IWN7 2480 aaPredicted RBP5.71□□□□□ -1.5
SCN8A-212ENST00000636945 IGHV3-49A0A0A0MS15 119 aa5.71□□□□□ -1.5
SCN8A-212ENST00000636945 COX7CP15954 63 aa5.71□□□□□ -1.5
SCN8A-212ENST00000636945 Q6ZSV7 163 aa5.71□□□□□ -1.5
SCN8A-212ENST00000636945 SMIM9A6NGZ8 99 aa5.71□□□□□ -1.5
SCN8A-212ENST00000636945 J3KT08 172 aa5.71□□□□□ -1.5
SCN8A-212ENST00000636945 C9orf153Q5TBE3 101 aa5.71□□□□□ -1.5
SCN8A-212ENST00000636945 VSIG2Q96IQ7 327 aa5.71□□□□□ -1.5
SCN8A-212ENST00000636945 NBASA2RRP1 2371 aa5.71□□□□□ -1.5
SCN8A-212ENST00000636945 C3orf56Q8N813 242 aa5.7□□□□□ -1.5
SCN8A-212ENST00000636945 DAND5Q8N907 189 aa5.7□□□□□ -1.5
SCN8A-212ENST00000636945 TIMM21Q9BVV7 248 aa5.7□□□□□ -1.5
SCN8A-212ENST00000636945 SIRPDQ9H106 197 aa5.7□□□□□ -1.5
SCN8A-212ENST00000636945 IGHV3-16A0A0C4DH30 117 aa5.7□□□□□ -1.5
SCN8A-212ENST00000636945 LOC107984640A0A0U1RRK4 108 aa5.7□□□□□ -1.5
SCN8A-212ENST00000636945 FAM223BA6NKX1 122 aa5.7□□□□□ -1.5
SCN8A-212ENST00000636945 NDUFA4O00483 81 aa5.7□□□□□ -1.5
SCN8A-212ENST00000636945 DEFB1P60022 68 aa5.7□□□□□ -1.5
SCN8A-212ENST00000636945 FAM222AQ5U5X8 452 aa5.7□□□□□ -1.5
SCN8A-212ENST00000636945 TMEM219Q86XT9 240 aa5.7□□□□□ -1.5
SCN8A-212ENST00000636945 FAM223AQ8IWN6 122 aa5.7□□□□□ -1.5
SCN8A-212ENST00000636945 A0A087WWL8 130 aa5.69□□□□□ -1.5
SCN8A-212ENST00000636945 TINCRA0A1B0GVN0 87 aa5.69□□□□□ -1.5
SCN8A-212ENST00000636945 G3V318 75 aa5.69□□□□□ -1.5
SCN8A-212ENST00000636945 J3KRW8 73 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms