RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-231	ENST00000636816	TRAV9-2	A0A087WT02	112 aa		11.45	□□□□□ -0.58
CACNA1A-231	ENST00000636816	hDV102S1	A0JD36	115 aa		11.45	□□□□□ -0.58
CACNA1A-231	ENST00000636816	C20orf202	A1L168	122 aa		11.45	□□□□□ -0.58
CACNA1A-231	ENST00000636816	SDHAF1	A6NFY7	115 aa		11.45	□□□□□ -0.58
CACNA1A-231	ENST00000636816	GTSCR1	Q86UQ5	136 aa		11.45	□□□□□ -0.58
CACNA1A-231	ENST00000636816	IL17D	Q8TAD2	202 aa		11.45	□□□□□ -0.58
CACNA1A-231	ENST00000636816	TRBV6-5	A0A0K0K1A5	114 aa		11.44	□□□□□ -0.58
CACNA1A-231	ENST00000636816		A8MWV9	139 aa		11.44	□□□□□ -0.58
CACNA1A-231	ENST00000636816	GOLT1B	Q9Y3E0	138 aa		11.44	□□□□□ -0.58
CACNA1A-231	ENST00000636816	PRIMA1	Q86XR5	153 aa		11.43	□□□□□ -0.58
CACNA1A-231	ENST00000636816	WFDC9	Q8NEX5	89 aa		11.43	□□□□□ -0.58
CACNA1A-231	ENST00000636816		M0R143	59 aa		11.43	□□□□□ -0.58
CACNA1A-231	ENST00000636816	PIK3CD-AS1	Q5SR53	167 aa		11.43	□□□□□ -0.58
CACNA1A-231	ENST00000636816	TMEM263	Q8WUH6	116 aa	Known RBP	11.43	□□□□□ -0.58
CACNA1A-231	ENST00000636816	TRGV1	A0A0A0MS02	117 aa		11.42	□□□□□ -0.58
CACNA1A-231	ENST00000636816	PLAC8L1	A1L4L8	177 aa		11.42	□□□□□ -0.58
CACNA1A-231	ENST00000636816	VCY	O14598	125 aa		11.42	□□□□□ -0.58
CACNA1A-231	ENST00000636816	RPL32	P62910	135 aa	Known RBP	11.42	□□□□□ -0.58
CACNA1A-231	ENST00000636816	ORMDL2	Q53FV1	153 aa		11.42	□□□□□ -0.58
CACNA1A-231	ENST00000636816		Q6ZTI0	123 aa		11.42	□□□□□ -0.58
CACNA1A-231	ENST00000636816	C1QTNF4	Q9BXJ3	329 aa		11.42	□□□□□ -0.58
CACNA1A-231	ENST00000636816	SNHG12	Q9BXW3	62 aa		11.42	□□□□□ -0.58
CACNA1A-231	ENST00000636816	DKK2	Q9UBU2	259 aa		11.42	□□□□□ -0.58
CACNA1A-231	ENST00000636816	RS1	O15537	224 aa		11.41	□□□□□ -0.58
CACNA1A-231	ENST00000636816	NOP10	Q9NPE3	64 aa	Known RBP	11.41	□□□□□ -0.58
CACNA1A-231	ENST00000636816	TRBV27	A0A0K0K1C4	114 aa		11.41	□□□□□ -0.58
CACNA1A-231	ENST00000636816	PRSS1	P07477	247 aa		11.41	□□□□□ -0.58
CACNA1A-231	ENST00000636816	LGALS9B	Q3B8N2	356 aa		11.41	□□□□□ -0.58
CACNA1A-231	ENST00000636816	LGALS9C	Q6DKI2	356 aa		11.41	□□□□□ -0.58
CACNA1A-231	ENST00000636816	ZFP2	Q6ZN57	461 aa		11.41	□□□□□ -0.58
CACNA1A-231	ENST00000636816	TOMM6	Q96B49	74 aa		11.41	□□□□□ -0.58
CACNA1A-231	ENST00000636816		A0A1B0GV90	55 aa		11.4	□□□□□ -0.58
CACNA1A-231	ENST00000636816	C2orf66	Q6UXQ4	117 aa		11.4	□□□□□ -0.58
CACNA1A-231	ENST00000636816		K7EMI3	77 aa		11.39	□□□□□ -0.59
CACNA1A-231	ENST00000636816	EREG	O14944	169 aa		11.39	□□□□□ -0.59
CACNA1A-231	ENST00000636816	IGLC3	P0DOY3	106 aa		11.39	□□□□□ -0.59
CACNA1A-231	ENST00000636816	LINC00469	Q8N7U9	141 aa		11.39	□□□□□ -0.59
CACNA1A-231	ENST00000636816	ATP5L	O75964	103 aa		11.38	□□□□□ -0.59
CACNA1A-231	ENST00000636816	ODF1	Q14990	250 aa		11.38	□□□□□ -0.59
CACNA1A-231	ENST00000636816	ZNF479	Q96JC4	524 aa		11.38	□□□□□ -0.59
CACNA1A-231	ENST00000636816	SCGB3A1	Q96QR1	104 aa		11.38	□□□□□ -0.59
CACNA1A-231	ENST00000636816	KIR2DL4	Q99706	377 aa		11.38	□□□□□ -0.59
CACNA1A-231	ENST00000636816	TP73-AS1	Q9UF72	201 aa		11.38	□□□□□ -0.59
CACNA1A-231	ENST00000636816	IGHV3-53	P01767	116 aa		11.37	□□□□□ -0.59
CACNA1A-231	ENST00000636816	RPL39	P62891	51 aa	Known RBP	11.37	□□□□□ -0.59
CACNA1A-231	ENST00000636816	RRN3P1	Q2M238	152 aa		11.37	□□□□□ -0.59
CACNA1A-231	ENST00000636816	OR4C5	Q8NGB2	326 aa		11.37	□□□□□ -0.59
CACNA1A-231	ENST00000636816	C16orf74	Q96GX8	76 aa		11.37	□□□□□ -0.59
CACNA1A-231	ENST00000636816	EDA2R	Q9HAV5	297 aa		11.37	□□□□□ -0.59
CACNA1A-231	ENST00000636816	STAB1	Q9NY15	2570 aa		11.37	□□□□□ -0.59
CACNA1A-231	ENST00000636816		H7C1H1	209 aa		11.37	□□□□□ -0.59
CACNA1A-231	ENST00000636816	TSHB	P01222	138 aa		11.37	□□□□□ -0.59
CACNA1A-231	ENST00000636816	DAZ2	Q13117	558 aa	Known RBP	11.37	□□□□□ -0.59
CACNA1A-231	ENST00000636816	C3orf56	Q8N813	242 aa		11.37	□□□□□ -0.59
CACNA1A-231	ENST00000636816	UQCR10	Q9UDW1	63 aa		11.37	□□□□□ -0.59
CACNA1A-231	ENST00000636816	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	11.36	□□□□□ -0.59
CACNA1A-231	ENST00000636816	TCTA	P57738	103 aa		11.36	□□□□□ -0.59
CACNA1A-231	ENST00000636816	STPG4	Q8N801	248 aa		11.36	□□□□□ -0.59
CACNA1A-231	ENST00000636816	NEXN-AS1	Q8NBZ9	246 aa		11.36	□□□□□ -0.59
CACNA1A-231	ENST00000636816	GAGE12B	A1L429	117 aa		11.36	□□□□□ -0.59
CACNA1A-231	ENST00000636816		I3L3M4	83 aa		11.36	□□□□□ -0.59
CACNA1A-231	ENST00000636816	RHOD	O00212	210 aa		11.36	□□□□□ -0.59
CACNA1A-231	ENST00000636816	GAGE7	O76087	117 aa		11.36	□□□□□ -0.59
CACNA1A-231	ENST00000636816	GAGE12F	P0CL80	117 aa		11.36	□□□□□ -0.59
CACNA1A-231	ENST00000636816	GAGE12G	P0CL81	117 aa		11.36	□□□□□ -0.59
CACNA1A-231	ENST00000636816	GAGE12I	P0CL82	117 aa		11.36	□□□□□ -0.59
CACNA1A-231	ENST00000636816	OXLD1	Q5BKU9	147 aa		11.36	□□□□□ -0.59
CACNA1A-231	ENST00000636816	TP53TG1	Q9Y2A0	90 aa		11.36	□□□□□ -0.59
CACNA1A-231	ENST00000636816	EMP1	P54849	157 aa		11.35	□□□□□ -0.59
CACNA1A-231	ENST00000636816	CYSLTR1	Q9Y271	337 aa		11.35	□□□□□ -0.59
CACNA1A-231	ENST00000636816	TNFRSF18	Q9Y5U5	241 aa		11.35	□□□□□ -0.59
CACNA1A-231	ENST00000636816	NBEAL2	Q6ZNJ1	2754 aa		11.35	□□□□□ -0.59
CACNA1A-231	ENST00000636816	HSBP1L1	C9JCN9	74 aa		11.34	□□□□□ -0.59
CACNA1A-231	ENST00000636816	WIPF1	O43516	503 aa		11.34	□□□□□ -0.59
CACNA1A-231	ENST00000636816	ANKRD39	Q53RE8	183 aa		11.34	□□□□□ -0.59
CACNA1A-231	ENST00000636816		Q6ZN92	141 aa		11.34	□□□□□ -0.59
CACNA1A-231	ENST00000636816	ZMAT4	Q9H898	229 aa		11.34	□□□□□ -0.59
CACNA1A-231	ENST00000636816	RIPPLY3	P57055	190 aa		11.34	□□□□□ -0.59
CACNA1A-231	ENST00000636816	ERAS	Q7Z444	233 aa		11.34	□□□□□ -0.59
CACNA1A-231	ENST00000636816	OVOL2	Q9BRP0	275 aa		11.34	□□□□□ -0.59
CACNA1A-231	ENST00000636816	MRPL35	Q9NZE8	188 aa	Known RBP	11.34	□□□□□ -0.59
CACNA1A-231	ENST00000636816	ZC2HC1B	Q5TFG8	222 aa		11.33	□□□□□ -0.6
CACNA1A-231	ENST00000636816	BAALC	Q8WXS3	180 aa		11.33	□□□□□ -0.6
CACNA1A-231	ENST00000636816		X6R8D5	127 aa		11.33	□□□□□ -0.6
CACNA1A-231	ENST00000636816		A0A087WX48	190 aa		11.32	□□□□□ -0.6
CACNA1A-231	ENST00000636816	TRAV4	A0A0B4J268	109 aa		11.32	□□□□□ -0.6
CACNA1A-231	ENST00000636816	IGHV3-38	A0A0C4DH36	116 aa		11.32	□□□□□ -0.6
CACNA1A-231	ENST00000636816	IGIP	A6NJ69	53 aa		11.32	□□□□□ -0.6
CACNA1A-231	ENST00000636816	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.32	□□□□□ -0.6
CACNA1A-231	ENST00000636816	HHLA3	Q9XRX5	114 aa		11.32	□□□□□ -0.6
CACNA1A-231	ENST00000636816	TRGV2	A0A075B6R0	118 aa		11.31	□□□□□ -0.6
CACNA1A-231	ENST00000636816	RHOH	Q15669	191 aa		11.31	□□□□□ -0.6
CACNA1A-231	ENST00000636816	C12orf54	Q6X4T0	127 aa		11.31	□□□□□ -0.6
CACNA1A-231	ENST00000636816	IGKC	P01834	107 aa		11.3	□□□□□ -0.6
CACNA1A-231	ENST00000636816	KRTAP10-11	P60412	298 aa		11.3	□□□□□ -0.6
CACNA1A-231	ENST00000636816	DEFB135	Q30KP9	77 aa		11.3	□□□□□ -0.6
CACNA1A-231	ENST00000636816	SHISA2	Q6UWI4	295 aa		11.3	□□□□□ -0.6
CACNA1A-231	ENST00000636816	OPRPN	Q99935	248 aa	Predicted RBP	11.3	□□□□□ -0.6
CACNA1A-231	ENST00000636816	MRPS16	Q9Y3D3	137 aa	Known RBP	11.3	□□□□□ -0.6
CACNA1A-231	ENST00000636816	PRSS29P	A6NIE9	313 aa		11.3	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms