RNA–Protein interactions for RNA: ENST00000636662.2

SCN2A-212, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 9,456 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-212ENST00000636662 NDUFA4O00483 81 aa4.38□□□□□ -1.71
SCN2A-212ENST00000636662 LINC01560Q8TB33 94 aa4.38□□□□□ -1.71
SCN2A-212ENST00000636662 PLA2G2FQ9BZM2 168 aa4.38□□□□□ -1.71
SCN2A-212ENST00000636662 COL4A1P02462 1669 aa4.38□□□□□ -1.71
SCN2A-212ENST00000636662 TRBV7-6A0A0J9YX20 115 aa4.38□□□□□ -1.71
SCN2A-212ENST00000636662 TECTAO75443 2155 aa4.38□□□□□ -1.71
SCN2A-212ENST00000636662 C10orf55Q5SWW7 151 aa4.38□□□□□ -1.71
SCN2A-212ENST00000636662 COL5A1P20908 1838 aaPredicted RBP4.38□□□□□ -1.71
SCN2A-212ENST00000636662 Q6JHZ5 121 aa4.38□□□□□ -1.71
SCN2A-212ENST00000636662 PIP4P2Q8N4L2 257 aa4.38□□□□□ -1.71
SCN2A-212ENST00000636662 A0A0J9YX75 114 aa4.38□□□□□ -1.71
SCN2A-212ENST00000636662 MALRD1Q5VYJ5 2156 aa4.38□□□□□ -1.71
SCN2A-212ENST00000636662 ZNF833PQ6ZTB9 187 aa4.38□□□□□ -1.71
SCN2A-212ENST00000636662 J3QLI3 93 aa4.37□□□□□ -1.71
SCN2A-212ENST00000636662 MIFP14174 115 aa4.37□□□□□ -1.71
SCN2A-212ENST00000636662 LOXP28300 417 aaPredicted RBP4.37□□□□□ -1.71
SCN2A-212ENST00000636662 FAM223BA6NKX1 122 aa4.37□□□□□ -1.71
SCN2A-212ENST00000636662 UBE2D3P61077 147 aa4.37□□□□□ -1.71
SCN2A-212ENST00000636662 UBE2D2P62837 147 aa4.37□□□□□ -1.71
SCN2A-212ENST00000636662 FAM223AQ8IWN6 122 aa4.37□□□□□ -1.71
SCN2A-212ENST00000636662 THSD7BQ9C0I4 1608 aa4.37□□□□□ -1.71
SCN2A-212ENST00000636662 COL8A2P25067 703 aa4.37□□□□□ -1.71
SCN2A-212ENST00000636662 MINOS1-NBL1R4GNA1 71 aa4.37□□□□□ -1.71
SCN2A-212ENST00000636662 C3orf84H3BNL1 204 aa4.37□□□□□ -1.71
SCN2A-212ENST00000636662 A0A0J9YY99 117 aa4.37□□□□□ -1.71
SCN2A-212ENST00000636662 A8MZ25 164 aa4.37□□□□□ -1.71
SCN2A-212ENST00000636662 WFDC13Q8IUB5 93 aa4.37□□□□□ -1.71
SCN2A-212ENST00000636662 TMEM263Q8WUH6 116 aaKnown RBP4.37□□□□□ -1.71
SCN2A-212ENST00000636662 KAAG1Q9UBP8 84 aa4.37□□□□□ -1.71
SCN2A-212ENST00000636662 ZDBF2Q9HCK1 2354 aa4.37□□□□□ -1.71
SCN2A-212ENST00000636662 MIAQ16674 131 aa4.37□□□□□ -1.71
SCN2A-212ENST00000636662 GPHB5Q86YW7 130 aa4.37□□□□□ -1.71
SCN2A-212ENST00000636662 COL4A4P53420 1690 aaPredicted RBP4.37□□□□□ -1.71
SCN2A-212ENST00000636662 TRIP6Q15654 476 aaKnown RBP4.37□□□□□ -1.71
SCN2A-212ENST00000636662 MLANAQ16655 118 aa4.37□□□□□ -1.71
SCN2A-212ENST00000636662 FGF23Q9GZV9 251 aaPredicted RBP4.37□□□□□ -1.71
SCN2A-212ENST00000636662 IGLV2-23P01705 113 aa4.36□□□□□ -1.71
SCN2A-212ENST00000636662 IGLV3-19P01714 112 aa4.36□□□□□ -1.71
SCN2A-212ENST00000636662 FAM120AOSQ5T036 256 aa4.36□□□□□ -1.71
SCN2A-212ENST00000636662 USMG5Q96IX5 58 aa4.36□□□□□ -1.71
SCN2A-212ENST00000636662 SLPIP03973 132 aa4.36□□□□□ -1.71
SCN2A-212ENST00000636662 CCL4P13236 92 aa4.36□□□□□ -1.71
SCN2A-212ENST00000636662 ARTNQ5T4W7 220 aa4.36□□□□□ -1.71
SCN2A-212ENST00000636662 Q6ZQY7 126 aa4.36□□□□□ -1.71
SCN2A-212ENST00000636662 CXCL6P80162 114 aa4.36□□□□□ -1.71
SCN2A-212ENST00000636662 KRTAP27-1Q3LI81 207 aa4.36□□□□□ -1.71
SCN2A-212ENST00000636662 C5orf56Q8N8D9 126 aa4.36□□□□□ -1.71
SCN2A-212ENST00000636662 FAM167A-AS1Q96KT0 104 aa4.36□□□□□ -1.71
SCN2A-212ENST00000636662 RHPN1-AS1Q9BWJ2 59 aa4.36□□□□□ -1.71
SCN2A-212ENST00000636662 TRAV7A0A075B6U4 112 aa4.36□□□□□ -1.71
SCN2A-212ENST00000636662 P0C879 139 aa4.36□□□□□ -1.71
SCN2A-212ENST00000636662 LINC00173Q6ZV60 143 aa4.36□□□□□ -1.71
SCN2A-212ENST00000636662 B9D2Q9BPU9 175 aa4.36□□□□□ -1.71
SCN2A-212ENST00000636662 GATA4P43694 442 aa4.36□□□□□ -1.71
SCN2A-212ENST00000636662 C22orf34Q6ZV56 151 aa4.36□□□□□ -1.71
SCN2A-212ENST00000636662 LINC00269Q8N2A0 174 aa4.36□□□□□ -1.71
SCN2A-212ENST00000636662 COX7BP24311 80 aa4.35□□□□□ -1.71
SCN2A-212ENST00000636662 RPP25Q9BUL9 199 aaKnown RBP4.35□□□□□ -1.71
SCN2A-212ENST00000636662 MBD3L4A6NDZ8 208 aaPredicted RBP4.35□□□□□ -1.71
SCN2A-212ENST00000636662 MBD3L3A6NE82 208 aaPredicted RBP4.35□□□□□ -1.71
SCN2A-212ENST00000636662 MBD3L5A6NJ08 208 aaPredicted RBP4.35□□□□□ -1.71
SCN2A-212ENST00000636662 PRR19A6NJB7 356 aa4.35□□□□□ -1.71
SCN2A-212ENST00000636662 CEP290O15078 2479 aa4.35□□□□□ -1.71
SCN2A-212ENST00000636662 GP9P14770 177 aa4.35□□□□□ -1.71
SCN2A-212ENST00000636662 PPDPFQ9H3Y8 114 aa4.35□□□□□ -1.71
SCN2A-212ENST00000636662 IGHV1-58A0A0C4DH39 117 aa4.35□□□□□ -1.71
SCN2A-212ENST00000636662 IGHV3-33P01772 117 aa4.35□□□□□ -1.71
SCN2A-212ENST00000636662 SPINK6Q6UWN8 80 aa4.35□□□□□ -1.71
SCN2A-212ENST00000636662 C20orf204Q6ZNR8 217 aa4.35□□□□□ -1.71
SCN2A-212ENST00000636662 CDIP1Q9H305 208 aa4.35□□□□□ -1.71
SCN2A-212ENST00000636662 TMEM89A2RUT3 159 aa4.35□□□□□ -1.71
SCN2A-212ENST00000636662 XAGE1AQ9HD64 81 aa4.35□□□□□ -1.71
SCN2A-212ENST00000636662 TRBV7-3A0A075B6L6 115 aa4.35□□□□□ -1.71
SCN2A-212ENST00000636662 LST1O00453 97 aa4.35□□□□□ -1.71
SCN2A-212ENST00000636662 MIR7-3HGQ8N6C7 128 aa4.34□□□□□ -1.71
SCN2A-212ENST00000636662 TRBV10-3A0A0K0K1G6 114 aa4.34□□□□□ -1.71
SCN2A-212ENST00000636662 SPINK1P00995 79 aa4.34□□□□□ -1.71
SCN2A-212ENST00000636662 NOP10Q9NPE3 64 aaKnown RBP4.34□□□□□ -1.71
SCN2A-212ENST00000636662 RPL39LQ96EH5 51 aaKnown RBP4.34□□□□□ -1.71
SCN2A-212ENST00000636662 CPAMD8Q8IZJ3 1885 aa4.34□□□□□ -1.71
SCN2A-212ENST00000636662 TMEM223A0PJW6 202 aa4.34□□□□□ -1.72
SCN2A-212ENST00000636662 RAI1Q7Z5J4 1906 aaPredicted RBP4.34□□□□□ -1.72
SCN2A-212ENST00000636662 UBE2D1P51668 147 aa4.34□□□□□ -1.72
SCN2A-212ENST00000636662 IGF2-ASQ6U949 168 aa4.33□□□□□ -1.72
SCN2A-212ENST00000636662 SPRY4Q9C004 299 aa4.33□□□□□ -1.72
SCN2A-212ENST00000636662 CELA1Q9UNI1 258 aa4.33□□□□□ -1.72
SCN2A-212ENST00000636662 IGHV3-30P01768 117 aa4.33□□□□□ -1.72
SCN2A-212ENST00000636662 IGHV3-30-3P0DP02 117 aa4.33□□□□□ -1.72
SCN2A-212ENST00000636662 IGHV3-30-5P0DP03 117 aa4.33□□□□□ -1.72
SCN2A-212ENST00000636662 K7ENP7 123 aa4.33□□□□□ -1.72
SCN2A-212ENST00000636662 IGLV2-8P01709 118 aa4.33□□□□□ -1.72
SCN2A-212ENST00000636662 C4orf26Q17RF5 130 aa4.33□□□□□ -1.72
SCN2A-212ENST00000636662 ZNF581Q9P0T4 197 aa4.33□□□□□ -1.72
SCN2A-212ENST00000636662 C15orf65H3BRN8 121 aa4.33□□□□□ -1.72
SCN2A-212ENST00000636662 LINC00310P59036 64 aa4.33□□□□□ -1.72
SCN2A-212ENST00000636662 NEXN-AS1Q8NBZ9 246 aa4.33□□□□□ -1.72
SCN2A-212ENST00000636662 C8orf87E5RJ46 101 aa4.33□□□□□ -1.72
SCN2A-212ENST00000636662 GNRH2O43555 120 aa4.33□□□□□ -1.72
SCN2A-212ENST00000636662 ZNF73O43830 326 aaPredicted RBP4.33□□□□□ -1.72
SCN2A-212ENST00000636662 KIR2DL5BQ8NHK3 375 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms