RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 ATRAIDQ6UW56 229 aa13.03□□□□□ -0.32
MECP2-216ENST00000627864 SH2D6Q7Z4S9 175 aa13.03□□□□□ -0.32
MECP2-216ENST00000627864 GATD1Q8NB37 220 aa13.03□□□□□ -0.32
MECP2-216ENST00000627864 ATP6V0E2Q8NHE4 81 aa13.03□□□□□ -0.32
MECP2-216ENST00000627864 RNF185Q96GF1 192 aa13.03□□□□□ -0.32
MECP2-216ENST00000627864 TRAV9-1A0A075B6T8 112 aa13.02□□□□□ -0.33
MECP2-216ENST00000627864 FAM104BQ5XKR9 115 aa13.02□□□□□ -0.33
MECP2-216ENST00000627864 LYPD5Q6UWN5 251 aa13.02□□□□□ -0.33
MECP2-216ENST00000627864 LINC00476Q8WZB0 136 aa13.02□□□□□ -0.33
MECP2-216ENST00000627864 TRBV7-3A0A075B6L6 115 aa13.01□□□□□ -0.33
MECP2-216ENST00000627864 LINC00694P0DN24 101 aa13.01□□□□□ -0.33
MECP2-216ENST00000627864 LINC00588Q9Y4M8 146 aa13.01□□□□□ -0.33
MECP2-216ENST00000627864 TNFRSF18Q9Y5U5 241 aa13.01□□□□□ -0.33
MECP2-216ENST00000627864 DNAJC30Q96LL9 226 aa13□□□□□ -0.33
MECP2-216ENST00000627864 NIT2Q9NQR4 276 aa13□□□□□ -0.33
MECP2-216ENST00000627864 LCE6AA0A183 80 aa12.99□□□□□ -0.33
MECP2-216ENST00000627864 UBE2D3P61077 147 aa12.99□□□□□ -0.33
MECP2-216ENST00000627864 UBE2D2P62837 147 aa12.99□□□□□ -0.33
MECP2-216ENST00000627864 MRPL51Q4U2R6 128 aaKnown RBP12.99□□□□□ -0.33
MECP2-216ENST00000627864 FRZBQ92765 325 aa12.99□□□□□ -0.33
MECP2-216ENST00000627864 RPL39LQ96EH5 51 aaKnown RBP12.99□□□□□ -0.33
MECP2-216ENST00000627864 MRAP2Q96G30 205 aa12.99□□□□□ -0.33
MECP2-216ENST00000627864 SMKR1H3BMG3 65 aa12.98□□□□□ -0.33
MECP2-216ENST00000627864 GAS8-AS1O95177 125 aa12.98□□□□□ -0.33
MECP2-216ENST00000627864 GTSF1LQ9H1H1 148 aa12.98□□□□□ -0.33
MECP2-216ENST00000627864 NCR2O95944 276 aa12.97□□□□□ -0.33
MECP2-216ENST00000627864 IGHV3-38A0A0C4DH36 116 aa12.96□□□□□ -0.33
MECP2-216ENST00000627864 OR10J3Q5JRS4 329 aa12.96□□□□□ -0.33
MECP2-216ENST00000627864 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.96□□□□□ -0.33
MECP2-216ENST00000627864 MRPS16Q9Y3D3 137 aaKnown RBP12.96□□□□□ -0.33
MECP2-216ENST00000627864 TGIF2-C20orf24A0A0A6YYL0 155 aa12.95□□□□□ -0.34
MECP2-216ENST00000627864 CKS2P33552 79 aa12.95□□□□□ -0.34
MECP2-216ENST00000627864 TIRAPP58753 221 aa12.95□□□□□ -0.34
MECP2-216ENST00000627864 ELOBQ15370 118 aa12.95□□□□□ -0.34
MECP2-216ENST00000627864 TMEM136Q6ZRR5 245 aa12.95□□□□□ -0.34
MECP2-216ENST00000627864 PLECQ15149 4684 aaKnown RBP12.95□□□□□ -0.34
MECP2-216ENST00000627864 RPS10P46783 165 aaKnown RBP12.94□□□□□ -0.34
MECP2-216ENST00000627864 DAZ4Q86SG3 579 aaKnown RBP12.93□□□□□ -0.34
MECP2-216ENST00000627864 CBLN2Q8IUK8 224 aa12.93□□□□□ -0.34
MECP2-216ENST00000627864 ST20Q9HBF5 79 aa12.93□□□□□ -0.34
MECP2-216ENST00000627864 DAZ3Q9NR90 486 aaKnown RBP12.93□□□□□ -0.34
MECP2-216ENST00000627864 SMCO4Q9NRQ5 59 aa12.93□□□□□ -0.34
MECP2-216ENST00000627864 TRBV6-5A0A0K0K1A5 114 aa12.92□□□□□ -0.34
MECP2-216ENST00000627864 D6R8Y8 96 aa12.92□□□□□ -0.34
MECP2-216ENST00000627864 COX19Q49B96 90 aa12.92□□□□□ -0.34
MECP2-216ENST00000627864 LELP1Q5T871 98 aa12.92□□□□□ -0.34
MECP2-216ENST00000627864 UPK3BQ9BT76 320 aa12.92□□□□□ -0.34
MECP2-216ENST00000627864 TRAV8-6A0A0B4J262 113 aa12.91□□□□□ -0.34
MECP2-216ENST00000627864 SDHAF1A6NFY7 115 aa12.91□□□□□ -0.34
MECP2-216ENST00000627864 PPP1R17O96001 155 aa12.91□□□□□ -0.34
MECP2-216ENST00000627864 PPBPP02775 128 aa12.91□□□□□ -0.34
MECP2-216ENST00000627864 NRACQ8N912 160 aa12.91□□□□□ -0.34
MECP2-216ENST00000627864 DEFB104AQ8WTQ1 72 aa12.91□□□□□ -0.34
MECP2-216ENST00000627864 GNB1LQ9BYB4 327 aa12.91□□□□□ -0.34
MECP2-216ENST00000627864 TRBV24-1A0A075B6N3 115 aa12.9□□□□□ -0.34
MECP2-216ENST00000627864 HLA-DQA1P01909 254 aa12.9□□□□□ -0.34
MECP2-216ENST00000627864 WFDC10BQ8IUB3 73 aa12.9□□□□□ -0.34
MECP2-216ENST00000627864 Q9H8V8 135 aa12.9□□□□□ -0.34
MECP2-216ENST00000627864 IGLV2-18A0A075B6J9 118 aa12.89□□□□□ -0.35
MECP2-216ENST00000627864 SIVA1O15304 175 aa12.89□□□□□ -0.35
MECP2-216ENST00000627864 TNFRSF6BO95407 300 aa12.89□□□□□ -0.35
MECP2-216ENST00000627864 APCSP02743 223 aa12.89□□□□□ -0.35
MECP2-216ENST00000627864 TMEM97Q5BJF2 176 aa12.89□□□□□ -0.35
MECP2-216ENST00000627864 ORMDL3Q8N138 153 aa12.89□□□□□ -0.35
MECP2-216ENST00000627864 PRELID3AQ96N28 172 aa12.89□□□□□ -0.35
MECP2-216ENST00000627864 YPEL4Q96NS1 127 aa12.89□□□□□ -0.35
MECP2-216ENST00000627864 ALMS1Q8TCU4 4167 aa12.88□□□□□ -0.35
MECP2-216ENST00000627864 TRBV6-8A0A0A6YYG3 113 aa12.88□□□□□ -0.35
MECP2-216ENST00000627864 NPYP01303 97 aa12.88□□□□□ -0.35
MECP2-216ENST00000627864 PMCHP20382 165 aa12.88□□□□□ -0.35
MECP2-216ENST00000627864 KIAA1644Q3SXP7 199 aa12.88□□□□□ -0.35
MECP2-216ENST00000627864 NTM-AS1Q6ZSK4 140 aa12.88□□□□□ -0.35
MECP2-216ENST00000627864 TMEM70Q9BUB7 260 aa12.88□□□□□ -0.35
MECP2-216ENST00000627864 MT-ND6P03923 174 aa12.87□□□□□ -0.35
MECP2-216ENST00000627864 POLR2KP53803 58 aaKnown RBP12.87□□□□□ -0.35
MECP2-216ENST00000627864 SUMO2P61956 95 aaKnown RBP12.87□□□□□ -0.35
MECP2-216ENST00000627864 COTL1Q14019 142 aa12.87□□□□□ -0.35
MECP2-216ENST00000627864 MRPL18Q9H0U6 180 aaKnown RBP12.87□□□□□ -0.35
MECP2-216ENST00000627864 I3L3M4 83 aa12.86□□□□□ -0.35
MECP2-216ENST00000627864 ATP6V1G1O75348 118 aa12.86□□□□□ -0.35
MECP2-216ENST00000627864 C20orf78Q9BR46 151 aa12.86□□□□□ -0.35
MECP2-216ENST00000627864 M0R2N4 97 aa12.85□□□□□ -0.35
MECP2-216ENST00000627864 VCYO14598 125 aa12.85□□□□□ -0.35
MECP2-216ENST00000627864 PHOX2AO14813 284 aa12.85□□□□□ -0.35
MECP2-216ENST00000627864 SCO1O75880 301 aa12.85□□□□□ -0.35
MECP2-216ENST00000627864 S100A1P23297 94 aa12.85□□□□□ -0.35
MECP2-216ENST00000627864 FABP9Q0Z7S8 132 aa12.85□□□□□ -0.35
MECP2-216ENST00000627864 TRAPPC1Q9Y5R8 145 aa12.85□□□□□ -0.35
MECP2-216ENST00000627864 TRBV25-1A0A075B6N4 114 aa12.84□□□□□ -0.35
MECP2-216ENST00000627864 IGHV1-24A0A0C4DH33 117 aa12.84□□□□□ -0.35
MECP2-216ENST00000627864 CHCHD5Q9BSY4 110 aa12.84□□□□□ -0.35
MECP2-216ENST00000627864 TRBV27A0A0K0K1C4 114 aa12.83□□□□□ -0.36
MECP2-216ENST00000627864 AMTP48728 403 aa12.83□□□□□ -0.36
MECP2-216ENST00000627864 IQCJQ1A5X6 159 aa12.83□□□□□ -0.36
MECP2-216ENST00000627864 LAMTOR2Q9Y2Q5 125 aa12.83□□□□□ -0.36
MECP2-216ENST00000627864 NBDYA0A0U1RRE5 68 aa12.82□□□□□ -0.36
MECP2-216ENST00000627864 IGHV3-30P01768 117 aa12.82□□□□□ -0.36
MECP2-216ENST00000627864 IGHV3-33P01772 117 aa12.82□□□□□ -0.36
MECP2-216ENST00000627864 DNAH10OSP0CZ25 163 aa12.82□□□□□ -0.36
MECP2-216ENST00000627864 IGHV3-30-3P0DP02 117 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms