RNA–Protein interactions for RNA: ENST00000627253.1

SNORD3E-202, Transcript of small nucleolar RNA, C/D box 3E, humanhuman

BASIC

Gene SNORD3E, Length 216 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3E-202ENST00000627253 HIST1H1DP16402 221 aaKnown RBP0.09□□□□□ -2.4
SNORD3E-202ENST00000627253 UBE2D1P51668 147 aa0.09□□□□□ -2.4
SNORD3E-202ENST00000627253 ARPC4P59998 168 aa0.09□□□□□ -2.4
SNORD3E-202ENST00000627253 S100A7L2Q5SY68 101 aa0.09□□□□□ -2.4
SNORD3E-202ENST00000627253 ZNF818PQ6ZRF7 136 aa0.09□□□□□ -2.4
SNORD3E-202ENST00000627253 Q6ZRX8 168 aa0.09□□□□□ -2.4
SNORD3E-202ENST00000627253 SPTSSBQ8NFR3 76 aa0.09□□□□□ -2.4
SNORD3E-202ENST00000627253 WFDC6Q9BQY6 131 aa0.09□□□□□ -2.4
SNORD3E-202ENST00000627253 SEC11CQ9BY50 192 aa0.09□□□□□ -2.4
SNORD3E-202ENST00000627253 AGPAT4-IT1Q9H0P7 198 aa0.09□□□□□ -2.4
SNORD3E-202ENST00000627253 SSC5DA1L4H1 1573 aa0.09□□□□□ -2.4
SNORD3E-202ENST00000627253 PLCE1Q9P212 2302 aa0.09□□□□□ -2.4
SNORD3E-202ENST00000627253 OTOGQ6ZRI0 2925 aa0.09□□□□□ -2.4
SNORD3E-202ENST00000627253 JMJD1CQ15652 2540 aa0.09□□□□□ -2.4
SNORD3E-202ENST00000627253 SPEF2Q9C093 1822 aa0.08□□□□□ -2.4
SNORD3E-202ENST00000627253 CDK13Q14004 1512 aaKnown RBP0.08□□□□□ -2.4
SNORD3E-202ENST00000627253 TMEM14DPA8MWL7 114 aa0.08□□□□□ -2.4
SNORD3E-202ENST00000627253 GNG7O60262 68 aa0.08□□□□□ -2.4
SNORD3E-202ENST00000627253 APODP05090 189 aa0.08□□□□□ -2.4
SNORD3E-202ENST00000627253 HMGN1P05114 100 aa0.08□□□□□ -2.4
SNORD3E-202ENST00000627253 NMBP08949 121 aa0.08□□□□□ -2.4
SNORD3E-202ENST00000627253 CCL8P80075 99 aa0.08□□□□□ -2.4
SNORD3E-202ENST00000627253 INSL4Q14641 139 aa0.08□□□□□ -2.4
SNORD3E-202ENST00000627253 MEIG1Q5JSS6 88 aa0.08□□□□□ -2.4
SNORD3E-202ENST00000627253 LINC00470Q9BZP3 86 aa0.08□□□□□ -2.4
SNORD3E-202ENST00000627253 LINC00312Q9Y6C7 94 aa0.08□□□□□ -2.4
SNORD3E-202ENST00000627253 BDP1A6H8Y1 2624 aa0.08□□□□□ -2.4
SNORD3E-202ENST00000627253 TTC28Q96AY4 2481 aa0.08□□□□□ -2.4
SNORD3E-202ENST00000627253 PLXNB2O15031 1838 aa0.08□□□□□ -2.4
SNORD3E-202ENST00000627253 FOCADQ5VW36 1801 aa0.08□□□□□ -2.4
SNORD3E-202ENST00000627253 ABCA12Q86UK0 2595 aa0.07□□□□□ -2.4
SNORD3E-202ENST00000627253 KDM6BO15054 1643 aa0.07□□□□□ -2.4
SNORD3E-202ENST00000627253 TRBV10-3A0A0K0K1G6 114 aa0.07□□□□□ -2.4
SNORD3E-202ENST00000627253 FAM92AA1XBS5 289 aa0.07□□□□□ -2.4
SNORD3E-202ENST00000627253 HCG22E2RYF7 251 aa0.07□□□□□ -2.4
SNORD3E-202ENST00000627253 K7EP13 123 aa0.07□□□□□ -2.4
SNORD3E-202ENST00000627253 APOC4-APOC2K7ER74 178 aa0.07□□□□□ -2.4
SNORD3E-202ENST00000627253 SIX6O95475 246 aa0.07□□□□□ -2.4
SNORD3E-202ENST00000627253 GCHFRP30047 84 aa0.07□□□□□ -2.4
SNORD3E-202ENST00000627253 RBM3P98179 157 aaKnown RBP0.07□□□□□ -2.4
SNORD3E-202ENST00000627253 COX6A2Q02221 97 aa0.07□□□□□ -2.4
SNORD3E-202ENST00000627253 Q5BKY6 102 aa0.07□□□□□ -2.4
SNORD3E-202ENST00000627253 Q5VV11 94 aa0.07□□□□□ -2.4
SNORD3E-202ENST00000627253 LSM10Q969L4 123 aaKnown RBP0.07□□□□□ -2.4
SNORD3E-202ENST00000627253 ARL11Q969Q4 196 aa0.07□□□□□ -2.4
SNORD3E-202ENST00000627253 PDCD10Q9BUL8 212 aa0.07□□□□□ -2.4
SNORD3E-202ENST00000627253 FAM107BQ9H098 131 aa0.07□□□□□ -2.4
SNORD3E-202ENST00000627253 SCP2D1Q9UJQ7 156 aa0.07□□□□□ -2.4
SNORD3E-202ENST00000627253 PATJQ8NI35 1801 aa0.07□□□□□ -2.4
SNORD3E-202ENST00000627253 ZNF518AQ6AHZ1 1483 aa0.07□□□□□ -2.4
SNORD3E-202ENST00000627253 DOCK1Q14185 1865 aa0.07□□□□□ -2.4
SNORD3E-202ENST00000627253 ZMYM4Q5VZL5 1548 aa0.07□□□□□ -2.4
SNORD3E-202ENST00000627253 CELSR2Q9HCU4 2923 aa0.07□□□□□ -2.4
SNORD3E-202ENST00000627253 DOCK2Q92608 1830 aa0.06□□□□□ -2.4
SNORD3E-202ENST00000627253 DAPK1P53355 1430 aa0.06□□□□□ -2.4
SNORD3E-202ENST00000627253 IFT140Q96RY7 1462 aa0.06□□□□□ -2.4
SNORD3E-202ENST00000627253 TRAV13-2A0A0B4J235 113 aa0.06□□□□□ -2.4
SNORD3E-202ENST00000627253 LOC100130705A0A1B0GUX0 176 aa0.06□□□□□ -2.4
SNORD3E-202ENST00000627253 FAM25AB3EWG3 89 aa0.06□□□□□ -2.4
SNORD3E-202ENST00000627253 FAM25CB3EWG5 89 aa0.06□□□□□ -2.4
SNORD3E-202ENST00000627253 FAM25GB3EWG6 89 aa0.06□□□□□ -2.4
SNORD3E-202ENST00000627253 G3V318 75 aa0.06□□□□□ -2.4
SNORD3E-202ENST00000627253 SPINK1P00995 79 aa0.06□□□□□ -2.4
SNORD3E-202ENST00000627253 BAGE3Q86Y29 109 aa0.06□□□□□ -2.4
SNORD3E-202ENST00000627253 Q8N8P6 123 aa0.06□□□□□ -2.4
SNORD3E-202ENST00000627253 COPS9Q8WXC6 57 aa0.06□□□□□ -2.4
SNORD3E-202ENST00000627253 TSC22D3Q99576 134 aa0.06□□□□□ -2.4
SNORD3E-202ENST00000627253 SNRNP25Q9BV90 132 aaKnown RBP0.06□□□□□ -2.4
SNORD3E-202ENST00000627253 RERGLQ9H628 205 aa0.06□□□□□ -2.4
SNORD3E-202ENST00000627253 SERP1Q9Y6X1 66 aa0.06□□□□□ -2.4
SNORD3E-202ENST00000627253 BICRAQ9NZM4 1560 aa0.06□□□□□ -2.4
SNORD3E-202ENST00000627253 WNK3Q9BYP7 1800 aa0.06□□□□□ -2.4
SNORD3E-202ENST00000627253 SYNE1Q8NF91 8797 aaKnown RBP0.06□□□□□ -2.4
SNORD3E-202ENST00000627253 GRIN2AQ12879 1464 aa0.05□□□□□ -2.4
SNORD3E-202ENST00000627253 USF3Q68DE3 2245 aa0.05□□□□□ -2.4
SNORD3E-202ENST00000627253 SIPA1L3O60292 1781 aaPredicted RBP0.05□□□□□ -2.4
SNORD3E-202ENST00000627253 TRAV1-2A0A0B4J238 106 aa0.05□□□□□ -2.4
SNORD3E-202ENST00000627253 PIGBOS1A0A0B4J2F0 54 aa0.05□□□□□ -2.4
SNORD3E-202ENST00000627253 ZNF815PA8K554 130 aa0.05□□□□□ -2.4
SNORD3E-202ENST00000627253 PPP1R17O96001 155 aa0.05□□□□□ -2.4
SNORD3E-202ENST00000627253 SMIM6P0DI80 62 aa0.05□□□□□ -2.4
SNORD3E-202ENST00000627253 BTG2P78543 158 aa0.05□□□□□ -2.4
SNORD3E-202ENST00000627253 Q56UQ5 140 aa0.05□□□□□ -2.4
SNORD3E-202ENST00000627253 C10orf128Q5T292 105 aa0.05□□□□□ -2.4
SNORD3E-202ENST00000627253 Q6AWC8 147 aa0.05□□□□□ -2.4
SNORD3E-202ENST00000627253 SSBP3-AS1Q7Z2R9 100 aa0.05□□□□□ -2.4
SNORD3E-202ENST00000627253 UBE2DNLQ8IWF7 75 aa0.05□□□□□ -2.4
SNORD3E-202ENST00000627253 FAM213BQ8TBF2 198 aa0.05□□□□□ -2.4
SNORD3E-202ENST00000627253 NAA60Q9H7X0 242 aa0.05□□□□□ -2.4
SNORD3E-202ENST00000627253 PSME4Q14997 1843 aa0.05□□□□□ -2.4
SNORD3E-202ENST00000627253 LAMC3Q9Y6N6 1575 aa0.05□□□□□ -2.4
SNORD3E-202ENST00000627253 GOLGA4Q13439 2230 aaKnown RBP0.05□□□□□ -2.4
SNORD3E-202ENST00000627253 NWD2Q9ULI1 1742 aa0.04□□□□□ -2.4
SNORD3E-202ENST00000627253 PTPRQQ9UMZ3 2332 aa0.04□□□□□ -2.4
SNORD3E-202ENST00000627253 CFTRP13569 1480 aa0.04□□□□□ -2.4
SNORD3E-202ENST00000627253 GOLGA3Q08378 1498 aa0.04□□□□□ -2.4
SNORD3E-202ENST00000627253 SPTBN2O15020 2390 aa0.04□□□□□ -2.4
SNORD3E-202ENST00000627253 C2CD3Q4AC94 2353 aa0.04□□□□□ -2.4
SNORD3E-202ENST00000627253 MYO7BQ6PIF6 2116 aa0.04□□□□□ -2.4
SNORD3E-202ENST00000627253 A0A0D9SFI3 127 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms