RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 SSTP61278 116 aa9.55□□□□□ -0.88
SNRPA1-216ENST00000626000 RPL23P62829 140 aaKnown RBP9.55□□□□□ -0.88
SNRPA1-216ENST00000626000 PNRC1Q12796 327 aaPredicted RBP9.55□□□□□ -0.88
SNRPA1-216ENST00000626000 KCNIP4Q6PIL6 250 aa9.55□□□□□ -0.88
SNRPA1-216ENST00000626000 GTSF1Q8WW33 167 aa9.55□□□□□ -0.88
SNRPA1-216ENST00000626000 CHCHD7Q9BUK0 85 aa9.55□□□□□ -0.88
SNRPA1-216ENST00000626000 TNFRSF18Q9Y5U5 241 aa9.55□□□□□ -0.88
SNRPA1-216ENST00000626000 URGCP-MRPS24S4R325 110 aa9.55□□□□□ -0.88
SNRPA1-216ENST00000626000 BIRC6Q9NR09 4857 aa9.55□□□□□ -0.88
SNRPA1-216ENST00000626000 A0A1B0GUT8 65 aa9.54□□□□□ -0.88
SNRPA1-216ENST00000626000 HIGD1CA8MV81 97 aa9.54□□□□□ -0.88
SNRPA1-216ENST00000626000 LAGE3Q14657 143 aa9.54□□□□□ -0.88
SNRPA1-216ENST00000626000 RASL11AQ6T310 242 aa9.54□□□□□ -0.88
SNRPA1-216ENST00000626000 NEXN-AS1Q8NBZ9 246 aa9.54□□□□□ -0.88
SNRPA1-216ENST00000626000 MSRB1Q9NZV6 116 aa9.54□□□□□ -0.88
SNRPA1-216ENST00000626000 C9JQL5 133 aa9.53□□□□□ -0.88
SNRPA1-216ENST00000626000 M0QY20 66 aa9.53□□□□□ -0.88
SNRPA1-216ENST00000626000 LINC00315P59091 139 aa9.53□□□□□ -0.88
SNRPA1-216ENST00000626000 ELOBQ15370 118 aa9.53□□□□□ -0.88
SNRPA1-216ENST00000626000 UQCC3Q6UW78 93 aa9.53□□□□□ -0.88
SNRPA1-216ENST00000626000 KRTAP1-5Q9BYS1 174 aa9.53□□□□□ -0.88
SNRPA1-216ENST00000626000 NAT8BQ9UHF3 227 aa9.53□□□□□ -0.88
SNRPA1-216ENST00000626000 A0A1B0GW15 77 aa9.52□□□□□ -0.89
SNRPA1-216ENST00000626000 PPP1R2P9O14990 202 aa9.52□□□□□ -0.89
SNRPA1-216ENST00000626000 SRSF3P84103 164 aaKnown RBP9.52□□□□□ -0.89
SNRPA1-216ENST00000626000 RIGQ13278 110 aa9.52□□□□□ -0.89
SNRPA1-216ENST00000626000 SUMO4Q6EEV6 95 aa9.52□□□□□ -0.89
SNRPA1-216ENST00000626000 PGLYRP4Q96LB8 373 aa9.52□□□□□ -0.89
SNRPA1-216ENST00000626000 NIT2Q9NQR4 276 aa9.52□□□□□ -0.89
SNRPA1-216ENST00000626000 V9GYV3 84 aa9.52□□□□□ -0.89
SNRPA1-216ENST00000626000 TRBV6-8A0A0A6YYG3 113 aa9.51□□□□□ -0.89
SNRPA1-216ENST00000626000 EREGO14944 169 aa9.51□□□□□ -0.89
SNRPA1-216ENST00000626000 S100A8P05109 93 aa9.51□□□□□ -0.89
SNRPA1-216ENST00000626000 A0A087WX48 190 aa9.5□□□□□ -0.89
SNRPA1-216ENST00000626000 TRAV8-3A0A0A6YYJ7 113 aa9.5□□□□□ -0.89
SNRPA1-216ENST00000626000 IBA57-AS1B1ANH7 110 aa9.5□□□□□ -0.89
SNRPA1-216ENST00000626000 Q9UF83 564 aa9.5□□□□□ -0.89
SNRPA1-216ENST00000626000 TRBV25-1A0A075B6N4 114 aa9.49□□□□□ -0.89
SNRPA1-216ENST00000626000 SMIM27A0A1W2PRY6 76 aa9.49□□□□□ -0.89
SNRPA1-216ENST00000626000 PPP1R17O96001 155 aa9.49□□□□□ -0.89
SNRPA1-216ENST00000626000 TMEM191AQ9H0A3 160 aa9.49□□□□□ -0.89
SNRPA1-216ENST00000626000 COX11Q9Y6N1 276 aa9.49□□□□□ -0.89
SNRPA1-216ENST00000626000 NIT1Q86X76 327 aa9.48□□□□□ -0.89
SNRPA1-216ENST00000626000 NUP35Q8NFH5 326 aa9.48□□□□□ -0.89
SNRPA1-216ENST00000626000 RMI2Q96E14 147 aa9.48□□□□□ -0.89
SNRPA1-216ENST00000626000 TM2D2Q9BX73 214 aa9.48□□□□□ -0.89
SNRPA1-216ENST00000626000 IGHV1-24A0A0C4DH33 117 aa9.47□□□□□ -0.89
SNRPA1-216ENST00000626000 A0A1B0GVY2 172 aa9.47□□□□□ -0.89
SNRPA1-216ENST00000626000 MT-ND4LP03901 98 aa9.47□□□□□ -0.89
SNRPA1-216ENST00000626000 MRAP2Q96G30 205 aa9.47□□□□□ -0.89
SNRPA1-216ENST00000626000 PSCAO43653 123 aa9.46□□□□□ -0.9
SNRPA1-216ENST00000626000 IGHV3-30P01768 117 aa9.46□□□□□ -0.9
SNRPA1-216ENST00000626000 IGHV3-33P01772 117 aa9.46□□□□□ -0.9
SNRPA1-216ENST00000626000 IGHV3-30-3P0DP02 117 aa9.46□□□□□ -0.9
SNRPA1-216ENST00000626000 IGHV3-30-5P0DP03 117 aa9.46□□□□□ -0.9
SNRPA1-216ENST00000626000 IFITM2Q01629 132 aa9.46□□□□□ -0.9
SNRPA1-216ENST00000626000 TNP2Q05952 138 aa9.46□□□□□ -0.9
SNRPA1-216ENST00000626000 COTL1Q14019 142 aa9.46□□□□□ -0.9
SNRPA1-216ENST00000626000 IQCJQ1A5X6 159 aa9.46□□□□□ -0.9
SNRPA1-216ENST00000626000 Q6ZRN7 208 aaPredicted RBP9.46□□□□□ -0.9
SNRPA1-216ENST00000626000 ANAPC16Q96DE5 110 aa9.46□□□□□ -0.9
SNRPA1-216ENST00000626000 CHCHD5Q9BSY4 110 aa9.46□□□□□ -0.9
SNRPA1-216ENST00000626000 TMEM262E9PQX1 116 aa9.45□□□□□ -0.9
SNRPA1-216ENST00000626000 F8W036 122 aa9.45□□□□□ -0.9
SNRPA1-216ENST00000626000 NCR2O95944 276 aa9.45□□□□□ -0.9
SNRPA1-216ENST00000626000 Q0VG73 95 aa9.45□□□□□ -0.9
SNRPA1-216ENST00000626000 ATP5L2Q7Z4Y8 100 aa9.45□□□□□ -0.9
SNRPA1-216ENST00000626000 GATD1Q8NB37 220 aa9.45□□□□□ -0.9
SNRPA1-216ENST00000626000 TRBV6-5A0A0K0K1A5 114 aa9.44□□□□□ -0.9
SNRPA1-216ENST00000626000 DNAH10Q8IVF4 4471 aa9.44□□□□□ -0.9
SNRPA1-216ENST00000626000 HBBP68871 147 aa9.43□□□□□ -0.9
SNRPA1-216ENST00000626000 CDPF1Q6NVV7 123 aa9.43□□□□□ -0.9
SNRPA1-216ENST00000626000 TMEM243Q9BU79 118 aa9.43□□□□□ -0.9
SNRPA1-216ENST00000626000 FRAS1Q86XX4 4008 aa9.42□□□□□ -0.9
SNRPA1-216ENST00000626000 TMEM218A2RU14 115 aa9.42□□□□□ -0.9
SNRPA1-216ENST00000626000 LINC00862A6NCI5 91 aa9.42□□□□□ -0.9
SNRPA1-216ENST00000626000 UBE2L6O14933 153 aa9.42□□□□□ -0.9
SNRPA1-216ENST00000626000 CRPP02741 224 aa9.42□□□□□ -0.9
SNRPA1-216ENST00000626000 Q9HAA7 133 aa9.42□□□□□ -0.9
SNRPA1-216ENST00000626000 ST20Q9HBF5 79 aa9.42□□□□□ -0.9
SNRPA1-216ENST00000626000 TRAV26-2A0A0B4J265 109 aa9.41□□□□□ -0.9
SNRPA1-216ENST00000626000 SDHAF1A6NFY7 115 aa9.41□□□□□ -0.9
SNRPA1-216ENST00000626000 H7C423 109 aa9.41□□□□□ -0.9
SNRPA1-216ENST00000626000 RAB4AP20338 218 aa9.41□□□□□ -0.9
SNRPA1-216ENST00000626000 AMTP48728 403 aa9.41□□□□□ -0.9
SNRPA1-216ENST00000626000 NTM-AS1Q6ZSK4 140 aa9.41□□□□□ -0.9
SNRPA1-216ENST00000626000 SEC11CQ9BY50 192 aa9.41□□□□□ -0.9
SNRPA1-216ENST00000626000 PGPEP1Q9NXJ5 209 aa9.41□□□□□ -0.9
SNRPA1-216ENST00000626000 A0A1B0GUV1 79 aa9.4□□□□□ -0.9
SNRPA1-216ENST00000626000 I3L3M4 83 aa9.4□□□□□ -0.9
SNRPA1-216ENST00000626000 TCAPO15273 167 aa9.4□□□□□ -0.9
SNRPA1-216ENST00000626000 PPBPP02775 128 aa9.4□□□□□ -0.9
SNRPA1-216ENST00000626000 CAMPP49913 170 aa9.4□□□□□ -0.9
SNRPA1-216ENST00000626000 FAM104BQ5XKR9 115 aa9.4□□□□□ -0.9
SNRPA1-216ENST00000626000 COMMD7Q86VX2 200 aa9.4□□□□□ -0.9
SNRPA1-216ENST00000626000 AMN1Q8IY45 258 aa9.4□□□□□ -0.9
SNRPA1-216ENST00000626000 IMMP2LQ96T52 175 aa9.4□□□□□ -0.9
SNRPA1-216ENST00000626000 CTDSP1Q9GZU7 261 aa9.4□□□□□ -0.9
SNRPA1-216ENST00000626000 KLK12Q9UKR0 248 aa9.4□□□□□ -0.9
SNRPA1-216ENST00000626000 HECTD4Q9Y4D8 3996 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms