RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 NAA60Q9H7X0 242 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 VAX2Q9UIW0 290 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 SCP2D1Q9UJQ7 156 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 TMEM56-RWDD3S4R434 201 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 IGKV2-40A0A087WW87 121 aaPredicted RBP1.78□□□□□ -2.12
CDKL5-208ENST00000624953 TRGV4A0A0C4DH28 118 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 MUC21A0A0G2JKD1 596 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 KRTAP4-16G5E9R7 235 aaPredicted RBP1.78□□□□□ -2.12
CDKL5-208ENST00000624953 H3BP45 60 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 GABARAPH6UMI1 98 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 PFDN1O60925 122 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 UPK1BO75841 260 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 IGKV2D-40P01614 121 aaPredicted RBP1.78□□□□□ -2.12
CDKL5-208ENST00000624953 TCRBP04435 133 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 SLC25A5P05141 298 aaKnown RBP1.78□□□□□ -2.12
CDKL5-208ENST00000624953 OR4E1P0C645 316 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 LINC00869P0C866 280 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 SULT1A3P0DMM9 295 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 SULT1A4P0DMN0 295 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 CRISP2P16562 243 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 RPL7P18124 248 aaKnown RBP1.78□□□□□ -2.12
CDKL5-208ENST00000624953 G0S2P27469 103 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 NKX2-5P52952 324 aaPredicted RBP1.78□□□□□ -2.12
CDKL5-208ENST00000624953 KRTAP10-10P60014 251 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 NCS1P62166 190 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 LSM3P62310 102 aaKnown RBP1.78□□□□□ -2.12
CDKL5-208ENST00000624953 POLR2GP62487 172 aaKnown RBP eCLIP1.78□□□□□ -2.12
CDKL5-208ENST00000624953 RANP62826 216 aaKnown RBP1.78□□□□□ -2.12
CDKL5-208ENST00000624953 SMCO1Q147U7 214 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 ACOT6Q3I5F7 207 aaPredicted RBP1.78□□□□□ -2.12
CDKL5-208ENST00000624953 PYDC2Q56P42 97 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 KRTAP26-1Q6PEX3 210 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 LCN15Q6UWW0 184 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 Q6ZN92 141 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 CYP2G1PQ6ZSU1 146 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 TOMM5Q8N4H5 51 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 SLC25A29Q8N8R3 303 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 C9orf163Q8N9P6 203 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 TERB2Q8NHR7 220 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 RNASE11Q8TAA1 199 aaKnown RBP1.78□□□□□ -2.12
CDKL5-208ENST00000624953 ENKURQ8TC29 256 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 ZFAND1Q8TCF1 268 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 PRRT1Q99946 306 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 SLC25A21Q9BQT8 299 aaPredicted RBP1.78□□□□□ -2.12
CDKL5-208ENST00000624953 TMEM147Q9BVK8 224 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 SLIRPQ9GZT3 109 aaKnown RBP1.78□□□□□ -2.12
CDKL5-208ENST00000624953 SLC25A31Q9H0C2 315 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 ARV1Q9H2C2 271 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 HIGD1AQ9Y241 93 aa1.78□□□□□ -2.12
CDKL5-208ENST00000624953 TRAV4A0A0B4J268 109 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 A0A0B4J2A0 478 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 TINCRA0A1B0GVN0 87 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 DISC1C4P0D8 188 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 C9JCJ5 164 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 K7EPK0 472 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 HPGDSO60760 199 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 HYPMO75409 117 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 ATG12O94817 140 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 OR5G3P0C626 314 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 PET100P0DJ07 73 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 CXCL2P19875 107 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 RNASE4P34096 147 aaKnown RBP1.77□□□□□ -2.13
CDKL5-208ENST00000624953 CTRLP40313 264 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 CCR6P51684 374 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 TAS2R19P59542 299 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 PRR3P79522 188 aaKnown RBP1.77□□□□□ -2.13
CDKL5-208ENST00000624953 CD164Q04900 197 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 SLC38A11Q08AI6 406 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 SCGB2B2Q4G0G5 96 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 RNASE10Q5GAN6 216 aaKnown RBP1.77□□□□□ -2.13
CDKL5-208ENST00000624953 ENHOQ6UWT2 76 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 LINC00305Q7Z4B0 112 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 ZFP82Q8N141 532 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 EXOC3-AS1Q8N2X6 119 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 Q8N976 141 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 NKAPP1Q8N9T2 125 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 OR1S1Q8NH92 325 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 Q8TAT8 98 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 PTH2Q96A98 100 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 SDHCQ99643 169 aaPredicted RBP1.77□□□□□ -2.13
CDKL5-208ENST00000624953 MGST2Q99735 147 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 TXNDC17Q9BRA2 123 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 SLC50A1Q9BRV3 221 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 ARL6Q9H0F7 186 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 GTSF1LQ9H1H1 148 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 COMMD3Q9UBI1 195 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 MTFP1Q9UDX5 166 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 SHPKQ9UHJ6 478 aa1.77□□□□□ -2.13
CDKL5-208ENST00000624953 TRBV19A0A075B6N1 114 aa1.76□□□□□ -2.13
CDKL5-208ENST00000624953 IGKV2D-24A0A075B6R9 120 aa1.76□□□□□ -2.13
CDKL5-208ENST00000624953 TRAV8-3A0A0A6YYJ7 113 aa1.76□□□□□ -2.13
CDKL5-208ENST00000624953 IGHV3-73A0A0B4J1V6 119 aa1.76□□□□□ -2.13
CDKL5-208ENST00000624953 LOC105371267A0A1B0GV96 52 aa1.76□□□□□ -2.13
CDKL5-208ENST00000624953 FAM240AA0A1B0GVK7 77 aa1.76□□□□□ -2.13
CDKL5-208ENST00000624953 A6NDN8 102 aa1.76□□□□□ -2.13
CDKL5-208ENST00000624953 FAM24AA6NFZ4 105 aa1.76□□□□□ -2.13
CDKL5-208ENST00000624953 LYRM1O43325 122 aa1.76□□□□□ -2.13
CDKL5-208ENST00000624953 GNRH2O43555 120 aa1.76□□□□□ -2.13
CDKL5-208ENST00000624953 CFDP00746 253 aaPredicted RBP1.76□□□□□ -2.13
CDKL5-208ENST00000624953 IL5P05113 134 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms