RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 NREPQ16612 68 aa6.85□□□□□ -1.31
VCL-206ENST00000623461 SERP2Q8N6R1 65 aa6.85□□□□□ -1.31
VCL-206ENST00000623461 PRR30Q53SZ7 412 aaPredicted RBP6.85□□□□□ -1.31
VCL-206ENST00000623461 RUSC1-AS1Q66K80 236 aa6.85□□□□□ -1.31
VCL-206ENST00000623461 SONP18583 2426 aaKnown RBP6.85□□□□□ -1.31
VCL-206ENST00000623461 EML5Q05BV3 1969 aa6.85□□□□□ -1.31
VCL-206ENST00000623461 LRP4O75096 1905 aa6.85□□□□□ -1.31
VCL-206ENST00000623461 CXCL5P42830 114 aa6.85□□□□□ -1.31
VCL-206ENST00000623461 WFDC9Q8NEX5 89 aa6.85□□□□□ -1.31
VCL-206ENST00000623461 UPK3BQ9BT76 320 aa6.85□□□□□ -1.31
VCL-206ENST00000623461 FAM240AA0A1B0GVK7 77 aa6.85□□□□□ -1.31
VCL-206ENST00000623461 NDUFC1O43677 76 aa6.85□□□□□ -1.31
VCL-206ENST00000623461 WT1P19544 449 aaPredicted RBP6.85□□□□□ -1.31
VCL-206ENST00000623461 BRWD1-AS2P59051 145 aa6.84□□□□□ -1.31
VCL-206ENST00000623461 IGFL3Q6UXB1 125 aa6.84□□□□□ -1.31
VCL-206ENST00000623461 DAND5Q8N907 189 aa6.84□□□□□ -1.31
VCL-206ENST00000623461 LINC00310P59036 64 aa6.84□□□□□ -1.31
VCL-206ENST00000623461 SP5Q6BEB4 398 aaPredicted RBP6.84□□□□□ -1.31
VCL-206ENST00000623461 IGHV7-81A0A0B4J1V7 117 aa6.84□□□□□ -1.31
VCL-206ENST00000623461 TMEM223A0PJW6 202 aa6.84□□□□□ -1.31
VCL-206ENST00000623461 HOXB4P17483 251 aaPredicted RBP6.84□□□□□ -1.31
VCL-206ENST00000623461 SPRY2O43597 315 aa6.84□□□□□ -1.31
VCL-206ENST00000623461 MYCNOSP40205 109 aa6.84□□□□□ -1.31
VCL-206ENST00000623461 CFHR3Q02985 330 aa6.84□□□□□ -1.31
VCL-206ENST00000623461 FAM110AQ9BQ89 295 aa6.84□□□□□ -1.31
VCL-206ENST00000623461 C14orf132Q9NPU4 83 aa6.84□□□□□ -1.31
VCL-206ENST00000623461 MRPS12O15235 138 aaKnown RBP6.84□□□□□ -1.32
VCL-206ENST00000623461 ELANEP08246 267 aa6.84□□□□□ -1.32
VCL-206ENST00000623461 PRSS33Q8NF86 280 aa6.84□□□□□ -1.32
VCL-206ENST00000623461 E7EUB6 86 aa6.83□□□□□ -1.32
VCL-206ENST00000623461 K7EQD1 137 aa6.83□□□□□ -1.32
VCL-206ENST00000623461 CENPVL3A0A0U1RRI6 287 aa6.83□□□□□ -1.32
VCL-206ENST00000623461 LY6HO94772 140 aa6.83□□□□□ -1.32
VCL-206ENST00000623461 KLK5Q9Y337 293 aaPredicted RBP6.83□□□□□ -1.32
VCL-206ENST00000623461 C20orf197Q8N268 126 aa6.83□□□□□ -1.32
VCL-206ENST00000623461 TRAV23DV6A0A075B6W5 121 aa6.83□□□□□ -1.32
VCL-206ENST00000623461 TRIAP1O43715 76 aa6.83□□□□□ -1.32
VCL-206ENST00000623461 RPL18AQ02543 176 aaKnown RBP6.83□□□□□ -1.32
VCL-206ENST00000623461 ATG2AQ2TAZ0 1938 aa6.83□□□□□ -1.32
VCL-206ENST00000623461 GNLYP22749 145 aa6.83□□□□□ -1.32
VCL-206ENST00000623461 SDIM1Q6ZPB5 146 aa6.83□□□□□ -1.32
VCL-206ENST00000623461 CPAMD8Q8IZJ3 1885 aa6.83□□□□□ -1.32
VCL-206ENST00000623461 MSMBP08118 114 aa6.83□□□□□ -1.32
VCL-206ENST00000623461 MRPL55Q7Z7F7 128 aaKnown RBP6.83□□□□□ -1.32
VCL-206ENST00000623461 LINC00574Q9H8X3 128 aa6.83□□□□□ -1.32
VCL-206ENST00000623461 NCOA6Q14686 2063 aaPredicted RBP6.83□□□□□ -1.32
VCL-206ENST00000623461 TNRC6BQ9UPQ9 1833 aaKnown RBP6.83□□□□□ -1.32
VCL-206ENST00000623461 TRBV12-3P01733 135 aa6.83□□□□□ -1.32
VCL-206ENST00000623461 IGHV3-30P01768 117 aa6.82□□□□□ -1.32
VCL-206ENST00000623461 IGHV3-30-5P0DP03 117 aa6.82□□□□□ -1.32
VCL-206ENST00000623461 TRBV7-3A0A075B6L6 115 aa6.82□□□□□ -1.32
VCL-206ENST00000623461 XCL1P47992 114 aa6.82□□□□□ -1.32
VCL-206ENST00000623461 DKK4Q9UBT3 224 aa6.82□□□□□ -1.32
VCL-206ENST00000623461 ZNF80P51504 273 aaPredicted RBP6.82□□□□□ -1.32
VCL-206ENST00000623461 F5H768 121 aa6.82□□□□□ -1.32
VCL-206ENST00000623461 SPRNQ5BIV9 151 aa6.82□□□□□ -1.32
VCL-206ENST00000623461 PLA2G5P39877 138 aa6.82□□□□□ -1.32
VCL-206ENST00000623461 RNF185Q96GF1 192 aa6.82□□□□□ -1.32
VCL-206ENST00000623461 MALRD1Q5VYJ5 2156 aa6.82□□□□□ -1.32
VCL-206ENST00000623461 TANC2Q9HCD6 1990 aa6.81□□□□□ -1.32
VCL-206ENST00000623461 K7EMT4 169 aa6.81□□□□□ -1.32
VCL-206ENST00000623461 ANGP03950 147 aaKnown RBP6.81□□□□□ -1.32
VCL-206ENST00000623461 COL4A4P53420 1690 aaPredicted RBP6.81□□□□□ -1.32
VCL-206ENST00000623461 C5orf38Q86SI9 138 aa6.81□□□□□ -1.32
VCL-206ENST00000623461 Q9HAA7 133 aa6.81□□□□□ -1.32
VCL-206ENST00000623461 MIR7-3HGQ8N6C7 128 aa6.81□□□□□ -1.32
VCL-206ENST00000623461 MUC6Q6W4X9 2439 aa6.81□□□□□ -1.32
VCL-206ENST00000623461 M0QXV9 152 aa6.81□□□□□ -1.32
VCL-206ENST00000623461 TIMM17BO60830 172 aa6.81□□□□□ -1.32
VCL-206ENST00000623461 IGLV1-47P01700 117 aa6.8□□□□□ -1.32
VCL-206ENST00000623461 HIGD2BQ4VC39 106 aa6.8□□□□□ -1.32
VCL-206ENST00000623461 LINC00694P0DN24 101 aa6.8□□□□□ -1.32
VCL-206ENST00000623461 SMIM9A6NGZ8 99 aa6.8□□□□□ -1.32
VCL-206ENST00000623461 INSL3P51460 131 aa6.8□□□□□ -1.32
VCL-206ENST00000623461 PRRC2AP48634 2157 aaKnown RBP6.8□□□□□ -1.32
VCL-206ENST00000623461 MRPS36P82909 103 aaKnown RBP6.79□□□□□ -1.32
VCL-206ENST00000623461 FAM215AQ9Y5M1 114 aa6.79□□□□□ -1.32
VCL-206ENST00000623461 K7ENP7 123 aa6.79□□□□□ -1.32
VCL-206ENST00000623461 PROP1O75360 226 aa6.79□□□□□ -1.32
VCL-206ENST00000623461 ZNF22P17026 224 aaPredicted RBP6.79□□□□□ -1.32
VCL-206ENST00000623461 CRIP1P50238 77 aa6.79□□□□□ -1.32
VCL-206ENST00000623461 Q8N9W7 124 aa6.79□□□□□ -1.32
VCL-206ENST00000623461 PRR14LQ5THK1 2151 aa6.79□□□□□ -1.32
VCL-206ENST00000623461 LST1O00453 97 aa6.79□□□□□ -1.32
VCL-206ENST00000623461 C9orf66Q5T8R8 295 aa6.79□□□□□ -1.32
VCL-206ENST00000623461 NOP10Q9NPE3 64 aaKnown RBP6.79□□□□□ -1.32
VCL-206ENST00000623461 C16orf74Q96GX8 76 aa6.79□□□□□ -1.32
VCL-206ENST00000623461 Q96MF0 132 aa6.78□□□□□ -1.32
VCL-206ENST00000623461 ODF3Q96PU9 254 aa6.78□□□□□ -1.32
VCL-206ENST00000623461 NDUFA1O15239 70 aa6.78□□□□□ -1.32
VCL-206ENST00000623461 DIRC1Q969H9 104 aa6.78□□□□□ -1.32
VCL-206ENST00000623461 C20orf173Q96LM9 149 aa6.78□□□□□ -1.32
VCL-206ENST00000623461 FANCD2OSQ96PS1 177 aa6.78□□□□□ -1.32
VCL-206ENST00000623461 SPRY4Q9C004 299 aa6.78□□□□□ -1.32
VCL-206ENST00000623461 HIVEP2P31629 2446 aa6.78□□□□□ -1.32
VCL-206ENST00000623461 OTOGLQ3ZCN5 2332 aa6.77□□□□□ -1.33
VCL-206ENST00000623461 IGLV2-11P01706 119 aa6.77□□□□□ -1.33
VCL-206ENST00000623461 CCL18P55774 89 aa6.77□□□□□ -1.33
VCL-206ENST00000623461 LINC00308Q8TCZ7 52 aa6.77□□□□□ -1.33
VCL-206ENST00000623461 TMEM263Q8WUH6 116 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms