RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 SPANXN2Q5MJ10 180 aa3.2□□□□□ -1.9
CDKL5-204ENST00000623364 Q8NBF4 154 aa3.2□□□□□ -1.9
CDKL5-204ENST00000623364 DIRAS2Q96HU8 199 aa3.2□□□□□ -1.9
CDKL5-204ENST00000623364 PGLYRP4Q96LB8 373 aa3.2□□□□□ -1.9
CDKL5-204ENST00000623364 RBKSQ9H477 322 aa3.2□□□□□ -1.9
CDKL5-204ENST00000623364 TRBV6-1A0A0K0K1D8 114 aa3.19□□□□□ -1.9
CDKL5-204ENST00000623364 SMCO3A2RU48 225 aa3.19□□□□□ -1.9
CDKL5-204ENST00000623364 TBPP20226 339 aa3.19□□□□□ -1.9
CDKL5-204ENST00000623364 SDC2P34741 201 aa3.19□□□□□ -1.9
CDKL5-204ENST00000623364 UCP3P55916 312 aa3.19□□□□□ -1.9
CDKL5-204ENST00000623364 RND3P61587 244 aa3.19□□□□□ -1.9
CDKL5-204ENST00000623364 PDE6HQ13956 83 aa3.19□□□□□ -1.9
CDKL5-204ENST00000623364 KRTAP7-1Q8IUC3 87 aa3.19□□□□□ -1.9
CDKL5-204ENST00000623364 MCFD2Q8NI22 146 aa3.19□□□□□ -1.9
CDKL5-204ENST00000623364 DYNC2LI1Q8TCX1 351 aa3.19□□□□□ -1.9
CDKL5-204ENST00000623364 DEDD2Q8WXF8 326 aa3.19□□□□□ -1.9
CDKL5-204ENST00000623364 IMMP2LQ96T52 175 aa3.19□□□□□ -1.9
CDKL5-204ENST00000623364 GPN1Q9HCN4 374 aaPredicted RBP3.19□□□□□ -1.9
CDKL5-204ENST00000623364 TXNL4BQ9NX01 149 aaKnown RBP3.19□□□□□ -1.9
CDKL5-204ENST00000623364 TRAV18A0A075B6X5 111 aa3.18□□□□□ -1.9
CDKL5-204ENST00000623364 AGPAT2O15120 278 aa3.18□□□□□ -1.9
CDKL5-204ENST00000623364 SULT1A3P0DMM9 295 aa3.18□□□□□ -1.9
CDKL5-204ENST00000623364 SULT1A4P0DMN0 295 aa3.18□□□□□ -1.9
CDKL5-204ENST00000623364 ESDP10768 282 aa3.18□□□□□ -1.9
CDKL5-204ENST00000623364 RNASE3P12724 160 aaKnown RBP3.18□□□□□ -1.9
CDKL5-204ENST00000623364 RAB3BP20337 219 aa3.18□□□□□ -1.9
CDKL5-204ENST00000623364 DEFA1P59665 94 aa3.18□□□□□ -1.9
CDKL5-204ENST00000623364 DEFA3P59666 94 aa3.18□□□□□ -1.9
CDKL5-204ENST00000623364 VBP1P61758 197 aa3.18□□□□□ -1.9
CDKL5-204ENST00000623364 RPS29P62273 56 aaKnown RBP3.18□□□□□ -1.9
CDKL5-204ENST00000623364 C10orf113Q5VZT2 155 aa3.18□□□□□ -1.9
CDKL5-204ENST00000623364 OR5A1Q8NGJ0 315 aa3.18□□□□□ -1.9
CDKL5-204ENST00000623364 S100A16Q96FQ6 103 aaKnown RBP3.18□□□□□ -1.9
CDKL5-204ENST00000623364 CCDC32Q9BV29 185 aa3.18□□□□□ -1.9
CDKL5-204ENST00000623364 CENPXA8MT69 81 aa3.17□□□□□ -1.9
CDKL5-204ENST00000623364 RGS5O15539 181 aa3.17□□□□□ -1.9
CDKL5-204ENST00000623364 B3GALNT1O75752 331 aa3.17□□□□□ -1.9
CDKL5-204ENST00000623364 APOA1P02647 267 aa3.17□□□□□ -1.9
CDKL5-204ENST00000623364 RCVRNP35243 200 aa3.17□□□□□ -1.9
CDKL5-204ENST00000623364 XCL1P47992 114 aa3.17□□□□□ -1.9
CDKL5-204ENST00000623364 RPL37P61927 97 aaKnown RBP3.17□□□□□ -1.9
CDKL5-204ENST00000623364 MRPS10P82664 201 aaKnown RBP3.17□□□□□ -1.9
CDKL5-204ENST00000623364 FABP5Q01469 135 aa3.17□□□□□ -1.9
CDKL5-204ENST00000623364 C22orf42Q6IC83 251 aa3.17□□□□□ -1.9
CDKL5-204ENST00000623364 OR51S1Q8NGJ8 323 aa3.17□□□□□ -1.9
CDKL5-204ENST00000623364 ZNF486Q96H40 463 aaPredicted RBP3.17□□□□□ -1.9
CDKL5-204ENST00000623364 TMEM243Q9BU79 118 aa3.17□□□□□ -1.9
CDKL5-204ENST00000623364 SLIRPQ9GZT3 109 aaKnown RBP3.17□□□□□ -1.9
CDKL5-204ENST00000623364 OR5AC2Q9NZP5 309 aa3.17□□□□□ -1.9
CDKL5-204ENST00000623364 PRSS46E5RG02 174 aa3.16□□□□□ -1.9
CDKL5-204ENST00000623364 GOSR2O14653 212 aa3.16□□□□□ -1.9
CDKL5-204ENST00000623364 UBE2L6O14933 153 aa3.16□□□□□ -1.9
CDKL5-204ENST00000623364 CDS2O95674 445 aa3.16□□□□□ -1.9
CDKL5-204ENST00000623364 AKR1C4P17516 323 aa3.16□□□□□ -1.9
CDKL5-204ENST00000623364 S100A4P26447 101 aaKnown RBP3.16□□□□□ -1.9
CDKL5-204ENST00000623364 UBE2AP49459 152 aa3.16□□□□□ -1.9
CDKL5-204ENST00000623364 AP3S2P59780 193 aa3.16□□□□□ -1.9
CDKL5-204ENST00000623364 NCS1P62166 190 aa3.16□□□□□ -1.9
CDKL5-204ENST00000623364 LSM3P62310 102 aaKnown RBP3.16□□□□□ -1.9
CDKL5-204ENST00000623364 SSBP1Q04837 148 aaKnown RBP3.16□□□□□ -1.9
CDKL5-204ENST00000623364 RGS21Q2M5E4 152 aa3.16□□□□□ -1.9
CDKL5-204ENST00000623364 GAGE2EQ4V326 116 aa3.16□□□□□ -1.9
CDKL5-204ENST00000623364 MZT2BQ6NZ67 158 aa3.16□□□□□ -1.9
CDKL5-204ENST00000623364 TMEM91Q6ZNR0 172 aa3.16□□□□□ -1.9
CDKL5-204ENST00000623364 TERB2Q8NHR7 220 aa3.16□□□□□ -1.9
CDKL5-204ENST00000623364 GAGE2DQ9UEU5 116 aa3.16□□□□□ -1.9
CDKL5-204ENST00000623364 F6UZH7 168 aa3.15□□□□□ -1.91
CDKL5-204ENST00000623364 BCL2L11O43521 198 aa3.15□□□□□ -1.91
CDKL5-204ENST00000623364 BLOC1S1P78537 153 aa3.15□□□□□ -1.91
CDKL5-204ENST00000623364 LBHQ53QV2 105 aaPredicted RBP3.15□□□□□ -1.91
CDKL5-204ENST00000623364 UBE2NLQ5JXB2 153 aa3.15□□□□□ -1.91
CDKL5-204ENST00000623364 Q8N9P0 234 aaPredicted RBP3.15□□□□□ -1.91
CDKL5-204ENST00000623364 C2orf48Q96LS8 159 aa3.15□□□□□ -1.91
CDKL5-204ENST00000623364 SOSTQ9BQB4 213 aa3.15□□□□□ -1.91
CDKL5-204ENST00000623364 MED28Q9H204 178 aa3.15□□□□□ -1.91
CDKL5-204ENST00000623364 COPZ2Q9P299 210 aa3.15□□□□□ -1.91
CDKL5-204ENST00000623364 AHNAKQ09666 5890 aaKnown RBP3.15□□□□□ -1.91
CDKL5-204ENST00000623364 NAP1L6A6NFF2 107 aa3.14□□□□□ -1.91
CDKL5-204ENST00000623364 FAM25AB3EWG3 89 aa3.14□□□□□ -1.91
CDKL5-204ENST00000623364 FAM25CB3EWG5 89 aa3.14□□□□□ -1.91
CDKL5-204ENST00000623364 FAM25GB3EWG6 89 aa3.14□□□□□ -1.91
CDKL5-204ENST00000623364 UPK1BO75841 260 aa3.14□□□□□ -1.91
CDKL5-204ENST00000623364 IAPPP10997 89 aa3.14□□□□□ -1.91
CDKL5-204ENST00000623364 FAUP35544 74 aaKnown RBP3.14□□□□□ -1.91
CDKL5-204ENST00000623364 MXD1Q05195 221 aa3.14□□□□□ -1.91
CDKL5-204ENST00000623364 PYDC2Q56P42 97 aa3.14□□□□□ -1.91
CDKL5-204ENST00000623364 LYZL1Q6UWQ5 148 aa3.14□□□□□ -1.91
CDKL5-204ENST00000623364 LYZL2Q7Z4W2 148 aa3.14□□□□□ -1.91
CDKL5-204ENST00000623364 SELENOHQ8IZQ5 122 aaKnown RBP3.14□□□□□ -1.91
CDKL5-204ENST00000623364 C12orf45Q8N5I9 185 aaPredicted RBP3.14□□□□□ -1.91
CDKL5-204ENST00000623364 TMED6Q8WW62 240 aa3.14□□□□□ -1.91
CDKL5-204ENST00000623364 PIGBOS1A0A0B4J2F0 54 aa3.13□□□□□ -1.91
CDKL5-204ENST00000623364 CTDSP2O14595 271 aa3.13□□□□□ -1.91
CDKL5-204ENST00000623364 IGLV6-57P01721 117 aa3.13□□□□□ -1.91
CDKL5-204ENST00000623364 RAB4BP61018 213 aa3.13□□□□□ -1.91
CDKL5-204ENST00000623364 SLC38A11Q08AI6 406 aa3.13□□□□□ -1.91
CDKL5-204ENST00000623364 IL18Q14116 193 aa3.13□□□□□ -1.91
CDKL5-204ENST00000623364 SMCO1Q147U7 214 aa3.13□□□□□ -1.91
CDKL5-204ENST00000623364 C6orf99Q4VX62 202 aa3.13□□□□□ -1.91
CDKL5-204ENST00000623364 TRIQKQ629K1 86 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms