RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 KNCNA6PVL3 124 aa13.67□□□□□ -0.22
PCDHB2-202ENST00000622947 DEFB131AP59861 70 aa13.67□□□□□ -0.22
PCDHB2-202ENST00000622947 AMTNQ6UX39 209 aa13.67□□□□□ -0.22
PCDHB2-202ENST00000622947 DYNLRB2Q8TF09 96 aa13.67□□□□□ -0.22
PCDHB2-202ENST00000622947 PRELID3AQ96N28 172 aa13.67□□□□□ -0.22
PCDHB2-202ENST00000622947 TAL2Q16559 108 aa13.66□□□□□ -0.22
PCDHB2-202ENST00000622947 C12orf74Q32Q52 190 aa13.66□□□□□ -0.22
PCDHB2-202ENST00000622947 RNF185Q96GF1 192 aa13.66□□□□□ -0.22
PCDHB2-202ENST00000622947 C1QTNF4Q9BXJ3 329 aa13.66□□□□□ -0.22
PCDHB2-202ENST00000622947 TRAV12-3A0A0B4J271 114 aa13.66□□□□□ -0.22
PCDHB2-202ENST00000622947 HLA-DRB4P13762 266 aa13.66□□□□□ -0.22
PCDHB2-202ENST00000622947 ZMAT4Q9H898 229 aa13.66□□□□□ -0.22
PCDHB2-202ENST00000622947 ZNF256Q9Y2P7 627 aaPredicted RBP13.66□□□□□ -0.22
PCDHB2-202ENST00000622947 HLA-DRB4X5D2U9 266 aa13.66□□□□□ -0.22
PCDHB2-202ENST00000622947 GAS8-AS1O95177 125 aa13.65□□□□□ -0.22
PCDHB2-202ENST00000622947 MT-ATP8P03928 68 aa13.65□□□□□ -0.22
PCDHB2-202ENST00000622947 SPINK13Q1W4C9 94 aa13.65□□□□□ -0.22
PCDHB2-202ENST00000622947 ORMDL3Q8N138 153 aa13.65□□□□□ -0.22
PCDHB2-202ENST00000622947 ODF3Q96PU9 254 aa13.65□□□□□ -0.22
PCDHB2-202ENST00000622947 SMKR1H3BMG3 65 aa13.64□□□□□ -0.23
PCDHB2-202ENST00000622947 GAGE5Q13069 117 aa13.64□□□□□ -0.23
PCDHB2-202ENST00000622947 GAGE6Q13070 117 aa13.64□□□□□ -0.23
PCDHB2-202ENST00000622947 RRN3P1Q2M238 152 aa13.64□□□□□ -0.23
PCDHB2-202ENST00000622947 Q6ZUT4 128 aa13.64□□□□□ -0.23
PCDHB2-202ENST00000622947 HHLA3Q9XRX5 114 aa13.64□□□□□ -0.23
PCDHB2-202ENST00000622947 F8P00451 2351 aa13.64□□□□□ -0.23
PCDHB2-202ENST00000622947 TENM1Q9UKZ4 2725 aa13.64□□□□□ -0.23
PCDHB2-202ENST00000622947 TRAV2A0A0B4J234 112 aa13.64□□□□□ -0.23
PCDHB2-202ENST00000622947 RNASE3P12724 160 aaKnown RBP13.64□□□□□ -0.23
PCDHB2-202ENST00000622947 EVI2AP22794 236 aa13.64□□□□□ -0.23
PCDHB2-202ENST00000622947 FXYD7P58549 80 aa13.64□□□□□ -0.23
PCDHB2-202ENST00000622947 NSUN5P1Q3KNT7 163 aa13.64□□□□□ -0.23
PCDHB2-202ENST00000622947 TTTY13Q9BZ97 58 aa13.63□□□□□ -0.23
PCDHB2-202ENST00000622947 IGHV4-4A0A075B6R2 117 aa13.63□□□□□ -0.23
PCDHB2-202ENST00000622947 RBMY1BA6NDE4 496 aaKnown RBP13.63□□□□□ -0.23
PCDHB2-202ENST00000622947 RBMY1EA6NEQ0 496 aaKnown RBP13.63□□□□□ -0.23
PCDHB2-202ENST00000622947 RBMY1DP0C7P1 496 aaKnown RBP13.63□□□□□ -0.23
PCDHB2-202ENST00000622947 MAP6D1Q9H9H5 199 aa13.63□□□□□ -0.23
PCDHB2-202ENST00000622947 VWFP04275 2813 aa13.62□□□□□ -0.23
PCDHB2-202ENST00000622947 ANAPC13Q9BS18 74 aa13.62□□□□□ -0.23
PCDHB2-202ENST00000622947 CKS2P33552 79 aa13.62□□□□□ -0.23
PCDHB2-202ENST00000622947 LEPP41159 167 aa13.62□□□□□ -0.23
PCDHB2-202ENST00000622947 H3BMM0 161 aa13.61□□□□□ -0.23
PCDHB2-202ENST00000622947 CRLF1O75462 422 aa13.61□□□□□ -0.23
PCDHB2-202ENST00000622947 NPYP01303 97 aa13.61□□□□□ -0.23
PCDHB2-202ENST00000622947 XGP55808 180 aa13.61□□□□□ -0.23
PCDHB2-202ENST00000622947 ODF1Q14990 250 aa13.61□□□□□ -0.23
PCDHB2-202ENST00000622947 K7EMI3 77 aa13.6□□□□□ -0.23
PCDHB2-202ENST00000622947 DUSP14O95147 198 aaKnown RBP13.6□□□□□ -0.23
PCDHB2-202ENST00000622947 RBMY1A1P0DJD3 496 aaKnown RBP13.6□□□□□ -0.23
PCDHB2-202ENST00000622947 RBMY1CP0DJD4 496 aa13.6□□□□□ -0.23
PCDHB2-202ENST00000622947 ASIPP42127 132 aa13.6□□□□□ -0.23
PCDHB2-202ENST00000622947 RBMY1FQ15415 496 aaKnown RBP13.6□□□□□ -0.23
PCDHB2-202ENST00000622947 SPANXN1Q5VSR9 72 aa13.6□□□□□ -0.23
PCDHB2-202ENST00000622947 JMJD1CQ15652 2540 aa13.6□□□□□ -0.23
PCDHB2-202ENST00000622947 A8MTW9 85 aa13.6□□□□□ -0.23
PCDHB2-202ENST00000622947 IGKCP01834 107 aa13.6□□□□□ -0.23
PCDHB2-202ENST00000622947 GATA1P15976 413 aaPredicted RBP13.59□□□□□ -0.23
PCDHB2-202ENST00000622947 S100A4P26447 101 aaKnown RBP13.59□□□□□ -0.23
PCDHB2-202ENST00000622947 ODF3L2Q3SX64 289 aa13.59□□□□□ -0.23
PCDHB2-202ENST00000622947 M0R381 172 aa13.59□□□□□ -0.23
PCDHB2-202ENST00000622947 SHISA2Q6UWI4 295 aa13.59□□□□□ -0.23
PCDHB2-202ENST00000622947 FAM159AQ6UWV7 190 aa13.59□□□□□ -0.23
PCDHB2-202ENST00000622947 FAM110AQ9BQ89 295 aa13.59□□□□□ -0.23
PCDHB2-202ENST00000622947 CFAP126Q5VTH2 177 aa13.58□□□□□ -0.24
PCDHB2-202ENST00000622947 VCX2Q9H322 139 aa13.58□□□□□ -0.24
PCDHB2-202ENST00000622947 GTSCR1Q86UQ5 136 aa13.58□□□□□ -0.24
PCDHB2-202ENST00000622947 CD7P09564 240 aa13.57□□□□□ -0.24
PCDHB2-202ENST00000622947 NFE4Q86UQ8 179 aa13.57□□□□□ -0.24
PCDHB2-202ENST00000622947 TRAV25A0A0B4J276 109 aa13.56□□□□□ -0.24
PCDHB2-202ENST00000622947 DPM2O94777 84 aa13.56□□□□□ -0.24
PCDHB2-202ENST00000622947 MED14OSP0DP75 135 aa13.56□□□□□ -0.24
PCDHB2-202ENST00000622947 MDFICQ9P1T7 246 aa13.56□□□□□ -0.24
PCDHB2-202ENST00000622947 PHLDA3Q9Y5J5 127 aa13.56□□□□□ -0.24
PCDHB2-202ENST00000622947 TRAV26-2A0A0B4J265 109 aa13.56□□□□□ -0.24
PCDHB2-202ENST00000622947 SMCPP49901 116 aaPredicted RBP13.56□□□□□ -0.24
PCDHB2-202ENST00000622947 LINC01546A6NGU7 62 aa13.55□□□□□ -0.24
PCDHB2-202ENST00000622947 ZC2HC1BQ5TFG8 222 aa13.55□□□□□ -0.24
PCDHB2-202ENST00000622947 Q8N1Y9 231 aa13.55□□□□□ -0.24
PCDHB2-202ENST00000622947 HIST1H4GQ99525 98 aa13.55□□□□□ -0.24
PCDHB2-202ENST00000622947 B5MCH6 92 aa13.55□□□□□ -0.24
PCDHB2-202ENST00000622947 TNFRSF6BO95407 300 aa13.55□□□□□ -0.24
PCDHB2-202ENST00000622947 PRSS1P07477 247 aa13.55□□□□□ -0.24
PCDHB2-202ENST00000622947 ZFAND6Q6FIF0 208 aa13.55□□□□□ -0.24
PCDHB2-202ENST00000622947 NDUFA11Q86Y39 141 aa13.55□□□□□ -0.24
PCDHB2-202ENST00000622947 TMEM158Q8WZ71 300 aa13.55□□□□□ -0.24
PCDHB2-202ENST00000622947 IGHV3-16A0A0C4DH30 117 aa13.54□□□□□ -0.24
PCDHB2-202ENST00000622947 ATP5LO75964 103 aa13.54□□□□□ -0.24
PCDHB2-202ENST00000622947 FCER1GP30273 86 aa13.54□□□□□ -0.24
PCDHB2-202ENST00000622947 MAPKAPK5-AS1Q8N8E1 139 aa13.54□□□□□ -0.24
PCDHB2-202ENST00000622947 NXPH4O95158 308 aa13.54□□□□□ -0.24
PCDHB2-202ENST00000622947 PRM2P04554 102 aa13.54□□□□□ -0.24
PCDHB2-202ENST00000622947 PPDPFLQ8WWR9 84 aa13.54□□□□□ -0.24
PCDHB2-202ENST00000622947 MAP1LC3AQ9H492 121 aa13.54□□□□□ -0.24
PCDHB2-202ENST00000622947 ATRQ13535 2644 aa13.53□□□□□ -0.24
PCDHB2-202ENST00000622947 TRRAPQ9Y4A5 3859 aa13.53□□□□□ -0.24
PCDHB2-202ENST00000622947 IGHV1OR15-1A0A075B7D0 117 aa13.53□□□□□ -0.24
PCDHB2-202ENST00000622947 IGLV1-51P01701 117 aa13.53□□□□□ -0.24
PCDHB2-202ENST00000622947 C14orf178Q8N769 122 aaPredicted RBP13.53□□□□□ -0.24
PCDHB2-202ENST00000622947 JPT2Q9H910 190 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms