RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 LAGE3Q14657 143 aa4.35□□□□□ -1.71
EBF1-211ENST00000622875 C2orf83Q53S99 150 aa4.35□□□□□ -1.71
EBF1-211ENST00000622875 PCP2Q8IVA1 136 aa4.35□□□□□ -1.71
EBF1-211ENST00000622875 C11orf53Q8IXP5 236 aa4.35□□□□□ -1.71
EBF1-211ENST00000622875 CNEP1R1Q8N9A8 125 aa4.35□□□□□ -1.71
EBF1-211ENST00000622875 TMEM52Q8NDY8 209 aa4.35□□□□□ -1.71
EBF1-211ENST00000622875 ZIC3O60481 467 aa4.35□□□□□ -1.71
EBF1-211ENST00000622875 SBSPONQ8IVN8 264 aa4.35□□□□□ -1.71
EBF1-211ENST00000622875 LINC00311Q8N616 119 aa4.35□□□□□ -1.71
EBF1-211ENST00000622875 F8VRH5 84 aa4.35□□□□□ -1.71
EBF1-211ENST00000622875 C16orf97H3BN30 126 aa4.35□□□□□ -1.71
EBF1-211ENST00000622875 M0R381 172 aa4.35□□□□□ -1.71
EBF1-211ENST00000622875 EFNA4P52798 201 aa4.35□□□□□ -1.71
EBF1-211ENST00000622875 WDR86Q86TI4 376 aa4.35□□□□□ -1.71
EBF1-211ENST00000622875 MARCH3Q86UD3 253 aa4.35□□□□□ -1.71
EBF1-211ENST00000622875 C9orf106Q8NAJ2 232 aa4.35□□□□□ -1.71
EBF1-211ENST00000622875 SRSF12Q8WXF0 261 aaKnown RBP4.35□□□□□ -1.71
EBF1-211ENST00000622875 ZNF799Q96GE5 643 aa4.35□□□□□ -1.71
EBF1-211ENST00000622875 M0R135 149 aa4.34□□□□□ -1.71
EBF1-211ENST00000622875 UBE2E1P51965 193 aa4.34□□□□□ -1.71
EBF1-211ENST00000622875 C10orf128Q5T292 105 aa4.34□□□□□ -1.71
EBF1-211ENST00000622875 ZC2HC1AQ96GY0 325 aa4.34□□□□□ -1.71
EBF1-211ENST00000622875 GFI1Q99684 422 aa4.34□□□□□ -1.71
EBF1-211ENST00000622875 KRTAP4-5Q9BYR2 181 aa4.34□□□□□ -1.71
EBF1-211ENST00000622875 H3BQ85 93 aa4.34□□□□□ -1.71
EBF1-211ENST00000622875 DSCR4P56555 118 aaPredicted RBP4.34□□□□□ -1.71
EBF1-211ENST00000622875 FAM27E3Q08E93 113 aa4.34□□□□□ -1.71
EBF1-211ENST00000622875 AJUBAQ96IF1 538 aa4.34□□□□□ -1.71
EBF1-211ENST00000622875 KLK5Q9Y337 293 aaPredicted RBP4.34□□□□□ -1.71
EBF1-211ENST00000622875 TRBV5-4A0A0C4DH59 114 aa4.34□□□□□ -1.72
EBF1-211ENST00000622875 HOXA4Q00056 320 aaPredicted RBP4.34□□□□□ -1.72
EBF1-211ENST00000622875 PLA2G2EQ9NZK7 142 aa4.34□□□□□ -1.72
EBF1-211ENST00000622875 ZNF581Q9P0T4 197 aa4.34□□□□□ -1.72
EBF1-211ENST00000622875 DKK2Q9UBU2 259 aa4.34□□□□□ -1.72
EBF1-211ENST00000622875 TP73-AS1Q9UF72 201 aa4.34□□□□□ -1.72
EBF1-211ENST00000622875 COX7A2LO14548 114 aa4.33□□□□□ -1.72
EBF1-211ENST00000622875 SAA1P0DJI8 122 aaPredicted RBP4.33□□□□□ -1.72
EBF1-211ENST00000622875 KRTAP10-3P60369 221 aa4.33□□□□□ -1.72
EBF1-211ENST00000622875 NDUFA11Q86Y39 141 aa4.33□□□□□ -1.72
EBF1-211ENST00000622875 FAM216BQ8N7L0 139 aa4.33□□□□□ -1.72
EBF1-211ENST00000622875 MED12LQ86YW9 2145 aa4.33□□□□□ -1.72
EBF1-211ENST00000622875 A0A1W2PNR3 127 aa4.33□□□□□ -1.72
EBF1-211ENST00000622875 Q6ZQT7 251 aa4.33□□□□□ -1.72
EBF1-211ENST00000622875 C22orf34Q6ZV56 151 aa4.33□□□□□ -1.72
EBF1-211ENST00000622875 RMI2Q96E14 147 aa4.33□□□□□ -1.72
EBF1-211ENST00000622875 PRO0461Q9UI25 63 aa4.33□□□□□ -1.72
EBF1-211ENST00000622875 TRBV7-1A0A0A6YYK4 115 aa4.33□□□□□ -1.72
EBF1-211ENST00000622875 PROP1O75360 226 aa4.33□□□□□ -1.72
EBF1-211ENST00000622875 PGLYRP1O75594 196 aaPredicted RBP4.33□□□□□ -1.72
EBF1-211ENST00000622875 ZNF138P52744 262 aa4.33□□□□□ -1.72
EBF1-211ENST00000622875 PDE6HQ13956 83 aa4.33□□□□□ -1.72
EBF1-211ENST00000622875 ESRGQ1W209 222 aa4.33□□□□□ -1.72
EBF1-211ENST00000622875 FAM19A1Q7Z5A9 133 aa4.33□□□□□ -1.72
EBF1-211ENST00000622875 DYNAPQ8N1N2 210 aa4.33□□□□□ -1.72
EBF1-211ENST00000622875 LINC01555Q8NAE3 123 aa4.33□□□□□ -1.72
EBF1-211ENST00000622875 TRAV12-1A0A0B4J245 112 aa4.32□□□□□ -1.72
EBF1-211ENST00000622875 TRBV30A0A0K0K1B3 111 aa4.32□□□□□ -1.72
EBF1-211ENST00000622875 MED14OSP0DP75 135 aa4.32□□□□□ -1.72
EBF1-211ENST00000622875 CCL28Q9NRJ3 127 aa4.32□□□□□ -1.72
EBF1-211ENST00000622875 RPS27P42677 84 aaKnown RBP4.32□□□□□ -1.72
EBF1-211ENST00000622875 UBE2D3P61077 147 aa4.32□□□□□ -1.72
EBF1-211ENST00000622875 UBE2D2P62837 147 aa4.32□□□□□ -1.72
EBF1-211ENST00000622875 Q6ZVQ6 151 aa4.32□□□□□ -1.72
EBF1-211ENST00000622875 Q8IYB0 196 aa4.32□□□□□ -1.72
EBF1-211ENST00000622875 TMEM75Q8N9X5 138 aa4.32□□□□□ -1.72
EBF1-211ENST00000622875 C1orf147Q96MC9 270 aaPredicted RBP4.32□□□□□ -1.72
EBF1-211ENST00000622875 RNF7Q9UBF6 113 aa4.32□□□□□ -1.72
EBF1-211ENST00000622875 KMT2AQ03164 3969 aa4.32□□□□□ -1.72
EBF1-211ENST00000622875 TET2Q6N021 2002 aaPredicted RBP4.32□□□□□ -1.72
EBF1-211ENST00000622875 DNAJC9-AS1A6NH13 148 aa4.32□□□□□ -1.72
EBF1-211ENST00000622875 ZNF726P1Q15940 193 aa4.32□□□□□ -1.72
EBF1-211ENST00000622875 DYNC1H1Q14204 4646 aaKnown RBP4.32□□□□□ -1.72
EBF1-211ENST00000622875 WNT9BO14905 357 aa4.32□□□□□ -1.72
EBF1-211ENST00000622875 ZNF73O43830 326 aaPredicted RBP4.32□□□□□ -1.72
EBF1-211ENST00000622875 EBI3Q14213 229 aa4.32□□□□□ -1.72
EBF1-211ENST00000622875 COX8CQ7Z4L0 72 aa4.32□□□□□ -1.72
EBF1-211ENST00000622875 LINC01561Q8N1V8 128 aa4.32□□□□□ -1.72
EBF1-211ENST00000622875 INS-IGF2F8WCM5 200 aa4.31□□□□□ -1.72
EBF1-211ENST00000622875 MRPS12O15235 138 aaKnown RBP4.31□□□□□ -1.72
EBF1-211ENST00000622875 XCL1P47992 114 aa4.31□□□□□ -1.72
EBF1-211ENST00000622875 FXYD7P58549 80 aa4.31□□□□□ -1.72
EBF1-211ENST00000622875 EIF4EBP1Q13541 118 aaPredicted RBP4.31□□□□□ -1.72
EBF1-211ENST00000622875 XCL2Q9UBD3 114 aa4.31□□□□□ -1.72
EBF1-211ENST00000622875 NUP214P35658 2090 aaPredicted RBP4.31□□□□□ -1.72
EBF1-211ENST00000622875 TRAV40A0A0B4J280 105 aa4.31□□□□□ -1.72
EBF1-211ENST00000622875 WI2-2373I1.2A0A1W2PRP0 233 aa4.31□□□□□ -1.72
EBF1-211ENST00000622875 NFE4Q86UQ8 179 aa4.31□□□□□ -1.72
EBF1-211ENST00000622875 Q8N8P6 123 aa4.31□□□□□ -1.72
EBF1-211ENST00000622875 STAB2Q8WWQ8 2551 aa4.31□□□□□ -1.72
EBF1-211ENST00000622875 B4DSR2 109 aa4.31□□□□□ -1.72
EBF1-211ENST00000622875 JMJD7-PLA2G4BH0Y9G9 81 aa4.31□□□□□ -1.72
EBF1-211ENST00000622875 TRBV12-3P01733 135 aa4.31□□□□□ -1.72
EBF1-211ENST00000622875 ZFP2Q6ZN57 461 aa4.31□□□□□ -1.72
EBF1-211ENST00000622875 ZNF329Q86UD4 541 aa4.31□□□□□ -1.72
EBF1-211ENST00000622875 FAM19A4Q96LR4 140 aa4.31□□□□□ -1.72
EBF1-211ENST00000622875 ICOSQ9Y6W8 199 aa4.31□□□□□ -1.72
EBF1-211ENST00000622875 WNK2Q9Y3S1 2297 aa4.31□□□□□ -1.72
EBF1-211ENST00000622875 TRAV13-2A0A0B4J235 113 aa4.3□□□□□ -1.72
EBF1-211ENST00000622875 BAALC-AS2P0C853 105 aa4.3□□□□□ -1.72
EBF1-211ENST00000622875 Q6ZRU5 148 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms