RNA–Protein interactions for RNA: ENST00000622565.4

LTBP4-239, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 756 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-239ENST00000622565 TPPP3Q9BW30 176 aa12.71□□□□□ -0.37
LTBP4-239ENST00000622565 MED9Q9NWA0 146 aa12.71□□□□□ -0.37
LTBP4-239ENST00000622565 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.7□□□□□ -0.38
LTBP4-239ENST00000622565 IGKV2D-24A0A075B6R9 120 aa12.7□□□□□ -0.38
LTBP4-239ENST00000622565 PDE6DO43924 150 aa12.7□□□□□ -0.38
LTBP4-239ENST00000622565 C9orf62Q8N4C0 152 aa12.7□□□□□ -0.38
LTBP4-239ENST00000622565 FER1L6-AS1Q8NA97 138 aa12.7□□□□□ -0.38
LTBP4-239ENST00000622565 CHCHD7Q9BUK0 85 aa12.7□□□□□ -0.38
LTBP4-239ENST00000622565 LINC01620Q4KN68 170 aa12.69□□□□□ -0.38
LTBP4-239ENST00000622565 MPV17L2Q567V2 206 aa12.69□□□□□ -0.38
LTBP4-239ENST00000622565 ATRAIDQ6UW56 229 aa12.69□□□□□ -0.38
LTBP4-239ENST00000622565 ENHOQ6UWT2 76 aa12.69□□□□□ -0.38
LTBP4-239ENST00000622565 DAZAP1Q96EP5 407 aaKnown RBP12.69□□□□□ -0.38
LTBP4-239ENST00000622565 SMIM12Q96EX1 92 aa12.69□□□□□ -0.38
LTBP4-239ENST00000622565 AP1S3Q96PC3 154 aa12.69□□□□□ -0.38
LTBP4-239ENST00000622565 TMEM262E9PQX1 116 aa12.68□□□□□ -0.38
LTBP4-239ENST00000622565 IFNA1P01562 189 aa12.68□□□□□ -0.38
LTBP4-239ENST00000622565 FRZBQ92765 325 aa12.68□□□□□ -0.38
LTBP4-239ENST00000622565 VAX2Q9UIW0 290 aa12.68□□□□□ -0.38
LTBP4-239ENST00000622565 COX11Q9Y6N1 276 aa12.68□□□□□ -0.38
LTBP4-239ENST00000622565 VPS13BQ7Z7G8 4022 aa12.68□□□□□ -0.38
LTBP4-239ENST00000622565 hCG_2014768A0A024R1R8 64 aa12.67□□□□□ -0.38
LTBP4-239ENST00000622565 SMIM17P0DL12 118 aa12.67□□□□□ -0.38
LTBP4-239ENST00000622565 INAFM2P0DMQ5 153 aa12.67□□□□□ -0.38
LTBP4-239ENST00000622565 RPS20P60866 119 aaKnown RBP12.67□□□□□ -0.38
LTBP4-239ENST00000622565 Q8N976 141 aa12.67□□□□□ -0.38
LTBP4-239ENST00000622565 RMI2Q96E14 147 aa12.67□□□□□ -0.38
LTBP4-239ENST00000622565 M0QY20 66 aa12.66□□□□□ -0.38
LTBP4-239ENST00000622565 P01737 135 aa12.66□□□□□ -0.38
LTBP4-239ENST00000622565 MGPP08493 103 aa12.66□□□□□ -0.38
LTBP4-239ENST00000622565 ELOBQ15370 118 aa12.66□□□□□ -0.38
LTBP4-239ENST00000622565 SUMO4Q6EEV6 95 aa12.66□□□□□ -0.38
LTBP4-239ENST00000622565 LYZL1Q6UWQ5 148 aa12.66□□□□□ -0.38
LTBP4-239ENST00000622565 C15orf54Q8N8G6 183 aa12.66□□□□□ -0.38
LTBP4-239ENST00000622565 NUDT10Q8NFP7 164 aa12.66□□□□□ -0.38
LTBP4-239ENST00000622565 NUDT11Q96G61 164 aa12.66□□□□□ -0.38
LTBP4-239ENST00000622565 K7EN84 100 aa12.65□□□□□ -0.38
LTBP4-239ENST00000622565 Q6ZSA8 131 aa12.65□□□□□ -0.38
LTBP4-239ENST00000622565 AKAP14Q86UN6 197 aa12.65□□□□□ -0.38
LTBP4-239ENST00000622565 CHCHD5Q9BSY4 110 aa12.65□□□□□ -0.38
LTBP4-239ENST00000622565 CACNG7P62955 275 aa12.64□□□□□ -0.39
LTBP4-239ENST00000622565 KCNIP4Q6PIL6 250 aa12.64□□□□□ -0.39
LTBP4-239ENST00000622565 Q0VG73 95 aa12.63□□□□□ -0.39
LTBP4-239ENST00000622565 ALKAL2Q6UX46 152 aa12.63□□□□□ -0.39
LTBP4-239ENST00000622565 OCC1Q8TAD7 63 aa12.63□□□□□ -0.39
LTBP4-239ENST00000622565 RNASE7Q9H1E1 156 aaKnown RBP12.63□□□□□ -0.39
LTBP4-239ENST00000622565 F2Z2F3 143 aa12.62□□□□□ -0.39
LTBP4-239ENST00000622565 ANGP03950 147 aaKnown RBP12.62□□□□□ -0.39
LTBP4-239ENST00000622565 NTF3P20783 257 aa12.62□□□□□ -0.39
LTBP4-239ENST00000622565 GAGE6Q13070 117 aa12.62□□□□□ -0.39
LTBP4-239ENST00000622565 SRRM2Q9UQ35 2752 aaKnown RBP12.61□□□□□ -0.39
LTBP4-239ENST00000622565 XKRY2A2RUG3 117 aa12.61□□□□□ -0.39
LTBP4-239ENST00000622565 CTRLP40313 264 aa12.61□□□□□ -0.39
LTBP4-239ENST00000622565 NKX2-5P52952 324 aaPredicted RBP12.61□□□□□ -0.39
LTBP4-239ENST00000622565 RBX1P62877 108 aa12.61□□□□□ -0.39
LTBP4-239ENST00000622565 DEFB104AQ8WTQ1 72 aa12.61□□□□□ -0.39
LTBP4-239ENST00000622565 C1orf43Q9BWL3 253 aa12.61□□□□□ -0.39
LTBP4-239ENST00000622565 FAM229AH3BQW9 127 aa12.6□□□□□ -0.39
LTBP4-239ENST00000622565 TAGLN2P37802 199 aaKnown RBP12.6□□□□□ -0.39
LTBP4-239ENST00000622565 IQCJQ1A5X6 159 aa12.6□□□□□ -0.39
LTBP4-239ENST00000622565 TMEM97Q5BJF2 176 aa12.6□□□□□ -0.39
LTBP4-239ENST00000622565 CLPSL2Q6UWE3 100 aa12.6□□□□□ -0.39
LTBP4-239ENST00000622565 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.6□□□□□ -0.39
LTBP4-239ENST00000622565 BIN3Q9NQY0 253 aa12.6□□□□□ -0.39
LTBP4-239ENST00000622565 TRBV25-1A0A075B6N4 114 aa12.59□□□□□ -0.39
LTBP4-239ENST00000622565 CRPP02741 224 aa12.59□□□□□ -0.39
LTBP4-239ENST00000622565 KRTAP26-1Q6PEX3 210 aa12.59□□□□□ -0.39
LTBP4-239ENST00000622565 RASL11AQ6T310 242 aa12.59□□□□□ -0.39
LTBP4-239ENST00000622565 LYPD6BQ8NI32 183 aa12.59□□□□□ -0.39
LTBP4-239ENST00000622565 RPP21Q9H633 154 aaKnown RBP12.59□□□□□ -0.39
LTBP4-239ENST00000622565 PRR34Q9NV39 138 aa12.59□□□□□ -0.39
LTBP4-239ENST00000622565 HERC1Q15751 4861 aa12.58□□□□□ -0.4
LTBP4-239ENST00000622565 H7C1H1 209 aa12.58□□□□□ -0.4
LTBP4-239ENST00000622565 TRGC1P0CF51 173 aa12.58□□□□□ -0.4
LTBP4-239ENST00000622565 LINC00269Q8N2A0 174 aa12.58□□□□□ -0.4
LTBP4-239ENST00000622565 GTSF1Q8WW33 167 aa12.58□□□□□ -0.4
LTBP4-239ENST00000622565 CNFNQ9BYD5 112 aa12.58□□□□□ -0.4
LTBP4-239ENST00000622565 DPH3P1Q9H4G8 78 aa12.58□□□□□ -0.4
LTBP4-239ENST00000622565 MYCBP2O75592 4640 aa12.58□□□□□ -0.4
LTBP4-239ENST00000622565 IGHV1-24A0A0C4DH33 117 aa12.57□□□□□ -0.4
LTBP4-239ENST00000622565 WDR73Q6P4I2 378 aa12.57□□□□□ -0.4
LTBP4-239ENST00000622565 HLA-DQA1P01909 254 aa12.56□□□□□ -0.4
LTBP4-239ENST00000622565 PKIAP61925 76 aa12.56□□□□□ -0.4
LTBP4-239ENST00000622565 BLOC1S1P78537 153 aa12.56□□□□□ -0.4
LTBP4-239ENST00000622565 TWIST1Q15672 202 aa12.56□□□□□ -0.4
LTBP4-239ENST00000622565 MIAQ16674 131 aa12.56□□□□□ -0.4
LTBP4-239ENST00000622565 SCXQ7RTU7 201 aa12.56□□□□□ -0.4
LTBP4-239ENST00000622565 NIT2Q9NQR4 276 aa12.56□□□□□ -0.4
LTBP4-239ENST00000622565 USP17L23D6RBM5 183 aa12.55□□□□□ -0.4
LTBP4-239ENST00000622565 FOXA3P55318 350 aaPredicted RBP12.55□□□□□ -0.4
LTBP4-239ENST00000622565 GATD1Q8NB37 220 aa12.55□□□□□ -0.4
LTBP4-239ENST00000622565 C20orf203Q8NBC4 194 aa12.55□□□□□ -0.4
LTBP4-239ENST00000622565 GFRA4Q9GZZ7 299 aa12.55□□□□□ -0.4
LTBP4-239ENST00000622565 IGLV4-60A0A075B6I1 120 aa12.54□□□□□ -0.4
LTBP4-239ENST00000622565 TRAV26-2A0A0B4J265 109 aa12.54□□□□□ -0.4
LTBP4-239ENST00000622565 TMEM250H0YL14 139 aa12.54□□□□□ -0.4
LTBP4-239ENST00000622565 A0A1B0GVG6 124 aa12.53□□□□□ -0.4
LTBP4-239ENST00000622565 PRSS1P07477 247 aa12.53□□□□□ -0.4
LTBP4-239ENST00000622565 LINC00528Q8N1L1 170 aa12.53□□□□□ -0.4
LTBP4-239ENST00000622565 PGLYRP4Q96LB8 373 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms