RNA–Protein interactions for RNA: ENST00000622494.1

RPRD1B-209, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-209ENST00000622494 ZNF493Q6ZR52 646 aa3.47□□□□□ -1.85
RPRD1B-209ENST00000622494 NUP35Q8NFH5 326 aa3.47□□□□□ -1.85
RPRD1B-209ENST00000622494 RNASE8Q8TDE3 154 aaKnown RBP3.47□□□□□ -1.85
RPRD1B-209ENST00000622494 PGLYRP4Q96LB8 373 aa3.47□□□□□ -1.85
RPRD1B-209ENST00000622494 C9orf85Q96MD7 179 aa3.47□□□□□ -1.85
RPRD1B-209ENST00000622494 GFRA4Q9GZZ7 299 aa3.47□□□□□ -1.85
RPRD1B-209ENST00000622494 SCRT2Q9NQ03 307 aa3.47□□□□□ -1.85
RPRD1B-209ENST00000622494 TIMM8BQ9Y5J9 83 aaPredicted RBP3.47□□□□□ -1.85
RPRD1B-209ENST00000622494 VPS13BQ7Z7G8 4022 aa3.46□□□□□ -1.86
RPRD1B-209ENST00000622494 A0A1B0GVY2 172 aa3.46□□□□□ -1.86
RPRD1B-209ENST00000622494 A0A1W2PPQ1 181 aa3.46□□□□□ -1.86
RPRD1B-209ENST00000622494 HIGD1CA8MV81 97 aa3.46□□□□□ -1.86
RPRD1B-209ENST00000622494 F2Z2F3 143 aa3.46□□□□□ -1.86
RPRD1B-209ENST00000622494 H3BVH4 76 aa3.46□□□□□ -1.86
RPRD1B-209ENST00000622494 SPINK4O60575 86 aa3.46□□□□□ -1.86
RPRD1B-209ENST00000622494 SCO1O75880 301 aa3.46□□□□□ -1.86
RPRD1B-209ENST00000622494 OR5AL1P0C617 328 aa3.46□□□□□ -1.86
RPRD1B-209ENST00000622494 NTF3P20783 257 aa3.46□□□□□ -1.86
RPRD1B-209ENST00000622494 TCL1AP56279 114 aa3.46□□□□□ -1.86
RPRD1B-209ENST00000622494 DAZ2Q13117 558 aaKnown RBP3.46□□□□□ -1.86
RPRD1B-209ENST00000622494 WDR73Q6P4I2 378 aa3.46□□□□□ -1.86
RPRD1B-209ENST00000622494 FER1L6-AS1Q8NA97 138 aa3.46□□□□□ -1.86
RPRD1B-209ENST00000622494 TMEM263Q8WUH6 116 aaKnown RBP3.46□□□□□ -1.86
RPRD1B-209ENST00000622494 PTH2Q96A98 100 aa3.46□□□□□ -1.86
RPRD1B-209ENST00000622494 C16orf74Q96GX8 76 aa3.46□□□□□ -1.86
RPRD1B-209ENST00000622494 IMMP2LQ96T52 175 aa3.46□□□□□ -1.86
RPRD1B-209ENST00000622494 SPXQ9BT56 116 aa3.46□□□□□ -1.86
RPRD1B-209ENST00000622494 KRTAP1-5Q9BYS1 174 aa3.46□□□□□ -1.86
RPRD1B-209ENST00000622494 NOP10Q9NPE3 64 aaKnown RBP3.46□□□□□ -1.86
RPRD1B-209ENST00000622494 NAT8BQ9UHF3 227 aa3.46□□□□□ -1.86
RPRD1B-209ENST00000622494 A0A0J9YY99 117 aa3.45□□□□□ -1.86
RPRD1B-209ENST00000622494 SNURFLB1AK76 121 aa3.45□□□□□ -1.86
RPRD1B-209ENST00000622494 F5H768 121 aa3.45□□□□□ -1.86
RPRD1B-209ENST00000622494 M0R2P5 195 aa3.45□□□□□ -1.86
RPRD1B-209ENST00000622494 SPART-AS1P0CW21 52 aa3.45□□□□□ -1.86
RPRD1B-209ENST00000622494 CTRLP40313 264 aa3.45□□□□□ -1.86
RPRD1B-209ENST00000622494 DAD1P61803 113 aa3.45□□□□□ -1.86
RPRD1B-209ENST00000622494 ZNF415Q09FC8 603 aa3.45□□□□□ -1.86
RPRD1B-209ENST00000622494 ELOBQ15370 118 aa3.45□□□□□ -1.86
RPRD1B-209ENST00000622494 LGALS9BQ3B8N2 356 aa3.45□□□□□ -1.86
RPRD1B-209ENST00000622494 ZNF876PQ49A33 203 aa3.45□□□□□ -1.86
RPRD1B-209ENST00000622494 Q6ZTI0 123 aa3.45□□□□□ -1.86
RPRD1B-209ENST00000622494 LINC00612Q8N6U2 182 aa3.45□□□□□ -1.86
RPRD1B-209ENST00000622494 POM121L12Q8N7R1 296 aa3.45□□□□□ -1.86
RPRD1B-209ENST00000622494 OR10AG1Q8NH19 301 aa3.45□□□□□ -1.86
RPRD1B-209ENST00000622494 RASL10AQ92737 203 aa3.45□□□□□ -1.86
RPRD1B-209ENST00000622494 YPEL4Q96NS1 127 aa3.45□□□□□ -1.86
RPRD1B-209ENST00000622494 TPPP3Q9BW30 176 aa3.45□□□□□ -1.86
RPRD1B-209ENST00000622494 JPT2Q9H910 190 aa3.45□□□□□ -1.86
RPRD1B-209ENST00000622494 SMCO4Q9NRQ5 59 aa3.45□□□□□ -1.86
RPRD1B-209ENST00000622494 MRPL16Q9NX20 251 aaKnown RBP3.45□□□□□ -1.86
RPRD1B-209ENST00000622494 PHLDA3Q9Y5J5 127 aa3.45□□□□□ -1.86
RPRD1B-209ENST00000622494 URGCP-MRPS24S4R325 110 aa3.45□□□□□ -1.86
RPRD1B-209ENST00000622494 MUC4Q99102 2169 aa3.45□□□□□ -1.86
RPRD1B-209ENST00000622494 TRGV1A0A0A0MS02 117 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 TGIF2-C20orf24A0A0A6YYL0 155 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 A0A1B0GUT8 65 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 A0A1B0GXF2 115 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 COLCA2A8K830 154 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 LYRM9A8MSI8 78 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 M0R381 172 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 RS1O15537 224 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 GAGE7O76087 117 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 NXPH4O95158 308 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 IGHV3-53P01767 116 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 CRYGDP07320 174 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 GAGE12FP0CL80 117 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 GAGE12GP0CL81 117 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 GAGE12IP0CL82 117 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 S100PP25815 95 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 LINC00315P59091 139 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 CACNG7P62955 275 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 RIGQ13278 110 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 SPANXN1Q5VSR9 72 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 KCNIP4Q6PIL6 250 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 CBLN2Q8IUK8 224 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 UBE2DNLQ8IWF7 75 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 BTF3L4Q96K17 158 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 CNFNQ9BYD5 112 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 SAMD10Q9BYL1 202 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 KIF25-AS1Q9Y6Z4 181 aa3.44□□□□□ -1.86
RPRD1B-209ENST00000622494 FAT1Q14517 4588 aa3.43□□□□□ -1.86
RPRD1B-209ENST00000622494 TRBV24-1A0A075B6N3 115 aa3.43□□□□□ -1.86
RPRD1B-209ENST00000622494 TRAV9-1A0A075B6T8 112 aa3.43□□□□□ -1.86
RPRD1B-209ENST00000622494 A0A096LPF7 62 aa3.43□□□□□ -1.86
RPRD1B-209ENST00000622494 EVI2AP22794 236 aa3.43□□□□□ -1.86
RPRD1B-209ENST00000622494 CAMPP49913 170 aa3.43□□□□□ -1.86
RPRD1B-209ENST00000622494 CFAP126Q5VTH2 177 aa3.43□□□□□ -1.86
RPRD1B-209ENST00000622494 UFSP1Q6NVU6 142 aa3.43□□□□□ -1.86
RPRD1B-209ENST00000622494 MRPL54Q6P161 138 aaKnown RBP3.43□□□□□ -1.86
RPRD1B-209ENST00000622494 Q6ZR54 194 aa3.43□□□□□ -1.86
RPRD1B-209ENST00000622494 ZFP82Q8N141 532 aa3.43□□□□□ -1.86
RPRD1B-209ENST00000622494 C14orf178Q8N769 122 aaPredicted RBP3.43□□□□□ -1.86
RPRD1B-209ENST00000622494 GATD1Q8NB37 220 aa3.43□□□□□ -1.86
RPRD1B-209ENST00000622494 BORCS7Q96B45 105 aa3.43□□□□□ -1.86
RPRD1B-209ENST00000622494 ZNF479Q96JC4 524 aa3.43□□□□□ -1.86
RPRD1B-209ENST00000622494 C18orf15Q96N68 181 aa3.43□□□□□ -1.86
RPRD1B-209ENST00000622494 NDUFAF3Q9BU61 184 aa3.43□□□□□ -1.86
RPRD1B-209ENST00000622494 LINC00588Q9Y4M8 146 aa3.43□□□□□ -1.86
RPRD1B-209ENST00000622494 TRGV2A0A075B6R0 118 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms