RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 H0YIZ8 118 aa8.17□□□□□ -1.1
POLR2A-209ENST00000617998 PLXNB3Q9ULL4 1909 aa8.17□□□□□ -1.1
POLR2A-209ENST00000617998 C10orf142B7Z368 130 aa8.16□□□□□ -1.1
POLR2A-209ENST00000617998 IGLV2-11P01706 119 aa8.16□□□□□ -1.1
POLR2A-209ENST00000617998 PLP1P60201 277 aa8.16□□□□□ -1.1
POLR2A-209ENST00000617998 RBM38Q9H0Z9 239 aaKnown RBP8.16□□□□□ -1.1
POLR2A-209ENST00000617998 IGLV1-40P01703 118 aa8.16□□□□□ -1.1
POLR2A-209ENST00000617998 RBMY1FQ15415 496 aaKnown RBP8.16□□□□□ -1.1
POLR2A-209ENST00000617998 SNAI2O43623 268 aa8.16□□□□□ -1.1
POLR2A-209ENST00000617998 NMBP08949 121 aa8.16□□□□□ -1.1
POLR2A-209ENST00000617998 CHCHD1Q96BP2 118 aaKnown RBP8.15□□□□□ -1.1
POLR2A-209ENST00000617998 MDFICQ9P1T7 246 aa8.15□□□□□ -1.1
POLR2A-209ENST00000617998 MIAQ16674 131 aa8.15□□□□□ -1.1
POLR2A-209ENST00000617998 Q5BKY6 102 aa8.15□□□□□ -1.1
POLR2A-209ENST00000617998 FAM19A1Q7Z5A9 133 aa8.15□□□□□ -1.1
POLR2A-209ENST00000617998 LINC00518Q8N0U6 118 aa8.15□□□□□ -1.1
POLR2A-209ENST00000617998 NPSP0C0P6 89 aa8.15□□□□□ -1.11
POLR2A-209ENST00000617998 CXCL5P42830 114 aa8.15□□□□□ -1.11
POLR2A-209ENST00000617998 FAM19A5Q7Z5A7 132 aaPredicted RBP8.14□□□□□ -1.11
POLR2A-209ENST00000617998 PRAC2D3DTV9 90 aa8.14□□□□□ -1.11
POLR2A-209ENST00000617998 ERG28Q9UKR5 140 aa8.14□□□□□ -1.11
POLR2A-209ENST00000617998 PRR20EP86478 221 aa8.14□□□□□ -1.11
POLR2A-209ENST00000617998 PRR20CP86479 221 aa8.14□□□□□ -1.11
POLR2A-209ENST00000617998 PRR20DP86480 221 aa8.14□□□□□ -1.11
POLR2A-209ENST00000617998 PRR20BP86481 221 aa8.14□□□□□ -1.11
POLR2A-209ENST00000617998 PRR20AP86496 221 aa8.14□□□□□ -1.11
POLR2A-209ENST00000617998 POM121L12Q8N7R1 296 aa8.14□□□□□ -1.11
POLR2A-209ENST00000617998 Q8N8P6 123 aa8.14□□□□□ -1.11
POLR2A-209ENST00000617998 ZNF479Q96JC4 524 aa8.14□□□□□ -1.11
POLR2A-209ENST00000617998 IGHV1-58A0A0C4DH39 117 aa8.14□□□□□ -1.11
POLR2A-209ENST00000617998 TMEM170AQ8WVE7 144 aa8.14□□□□□ -1.11
POLR2A-209ENST00000617998 C20orf78Q9BR46 151 aa8.14□□□□□ -1.11
POLR2A-209ENST00000617998 LINC00574Q9H8X3 128 aa8.14□□□□□ -1.11
POLR2A-209ENST00000617998 C1orf229Q6ZS94 237 aaPredicted RBP8.13□□□□□ -1.11
POLR2A-209ENST00000617998 GNB1LQ9BYB4 327 aa8.13□□□□□ -1.11
POLR2A-209ENST00000617998 RNF222A6NCQ9 220 aa8.13□□□□□ -1.11
POLR2A-209ENST00000617998 ATXN8Q156A1 80 aa8.13□□□□□ -1.11
POLR2A-209ENST00000617998 FAM104BQ5XKR9 115 aa8.13□□□□□ -1.11
POLR2A-209ENST00000617998 HECTD1Q9ULT8 2610 aa8.13□□□□□ -1.11
POLR2A-209ENST00000617998 ZNF106Q9H2Y7 1883 aaKnown RBP8.13□□□□□ -1.11
POLR2A-209ENST00000617998 SERF1AO75920 110 aa8.13□□□□□ -1.11
POLR2A-209ENST00000617998 BAALCQ8WXS3 180 aa8.13□□□□□ -1.11
POLR2A-209ENST00000617998 ODF3Q96PU9 254 aa8.13□□□□□ -1.11
POLR2A-209ENST00000617998 NDUFB1O75438 58 aa8.13□□□□□ -1.11
POLR2A-209ENST00000617998 EGR2P11161 476 aaPredicted RBP8.13□□□□□ -1.11
POLR2A-209ENST00000617998 LELP1Q5T871 98 aa8.13□□□□□ -1.11
POLR2A-209ENST00000617998 A0A087X0K7 114 aa8.12□□□□□ -1.11
POLR2A-209ENST00000617998 SYCNQ0VAF6 134 aa8.12□□□□□ -1.11
POLR2A-209ENST00000617998 CITED1Q99966 193 aa8.12□□□□□ -1.11
POLR2A-209ENST00000617998 LRP4O75096 1905 aa8.12□□□□□ -1.11
POLR2A-209ENST00000617998 E7EUB6 86 aa8.11□□□□□ -1.11
POLR2A-209ENST00000617998 LTAP01374 205 aa8.11□□□□□ -1.11
POLR2A-209ENST00000617998 A0A1B0GV90 55 aa8.11□□□□□ -1.11
POLR2A-209ENST00000617998 CRYBA4P53673 196 aa8.11□□□□□ -1.11
POLR2A-209ENST00000617998 UTF1Q5T230 341 aa8.11□□□□□ -1.11
POLR2A-209ENST00000617998 ZNF664Q8N3J9 261 aa8.11□□□□□ -1.11
POLR2A-209ENST00000617998 ZNF706Q9Y5V0 76 aaPredicted RBP8.11□□□□□ -1.11
POLR2A-209ENST00000617998 SBSPONQ8IVN8 264 aa8.11□□□□□ -1.11
POLR2A-209ENST00000617998 CHCHD10Q8WYQ3 142 aaPredicted RBP8.11□□□□□ -1.11
POLR2A-209ENST00000617998 A0A1B0GWB2 263 aa8.11□□□□□ -1.11
POLR2A-209ENST00000617998 FAM231BA6NCW3 169 aa8.11□□□□□ -1.11
POLR2A-209ENST00000617998 Q6ZSR3 168 aa8.11□□□□□ -1.11
POLR2A-209ENST00000617998 TRAV8-4A0A0B4J246 113 aa8.11□□□□□ -1.11
POLR2A-209ENST00000617998 TRBV6-1A0A0K0K1D8 114 aa8.11□□□□□ -1.11
POLR2A-209ENST00000617998 A0A096LNI7 61 aa8.1□□□□□ -1.11
POLR2A-209ENST00000617998 ZFP2Q6ZN57 461 aa8.1□□□□□ -1.11
POLR2A-209ENST00000617998 STPG4Q8N801 248 aa8.1□□□□□ -1.11
POLR2A-209ENST00000617998 MRPL51Q4U2R6 128 aaKnown RBP8.1□□□□□ -1.11
POLR2A-209ENST00000617998 COX7B2Q8TF08 81 aa8.1□□□□□ -1.11
POLR2A-209ENST00000617998 PLA2G1BP04054 148 aaKnown RBP8.1□□□□□ -1.11
POLR2A-209ENST00000617998 SMIM6P0DI80 62 aa8.1□□□□□ -1.11
POLR2A-209ENST00000617998 XGP55808 180 aa8.1□□□□□ -1.11
POLR2A-209ENST00000617998 TET2Q6N021 2002 aaPredicted RBP8.1□□□□□ -1.11
POLR2A-209ENST00000617998 hADV29S1A0JD25 119 aa8.09□□□□□ -1.11
POLR2A-209ENST00000617998 C6orf223Q8N319 242 aa8.09□□□□□ -1.11
POLR2A-209ENST00000617998 Q8N6K4 173 aa8.09□□□□□ -1.11
POLR2A-209ENST00000617998 MRGPRG-AS1Q2M3A8 158 aa8.09□□□□□ -1.11
POLR2A-209ENST00000617998 CT83Q5H943 113 aa8.09□□□□□ -1.11
POLR2A-209ENST00000617998 LINC00337Q8N6G1 96 aa8.09□□□□□ -1.11
POLR2A-209ENST00000617998 LOC107984640A0A0U1RRK4 108 aa8.09□□□□□ -1.11
POLR2A-209ENST00000617998 TRBV6-4A0A1B0GX49 114 aa8.08□□□□□ -1.12
POLR2A-209ENST00000617998 LINC01551Q86U37 167 aa8.08□□□□□ -1.12
POLR2A-209ENST00000617998 MUC22E2RYF6 1773 aaPredicted RBP8.08□□□□□ -1.12
POLR2A-209ENST00000617998 UBE2D2P62837 147 aa8.08□□□□□ -1.12
POLR2A-209ENST00000617998 RS1O15537 224 aa8.08□□□□□ -1.12
POLR2A-209ENST00000617998 HERV-K104P63124 156 aa8.08□□□□□ -1.12
POLR2A-209ENST00000617998 ARHGAP32A7KAX9 2087 aa8.07□□□□□ -1.12
POLR2A-209ENST00000617998 IGKV1D-37A0A075B6S9 117 aa8.07□□□□□ -1.12
POLR2A-209ENST00000617998 TRAV13-2A0A0B4J235 113 aa8.07□□□□□ -1.12
POLR2A-209ENST00000617998 ATRAIDQ6UW56 229 aa8.07□□□□□ -1.12
POLR2A-209ENST00000617998 TP53TG3Q9ULZ0 132 aa8.07□□□□□ -1.12
POLR2A-209ENST00000617998 KIAA1549Q9HCM3 1950 aa8.07□□□□□ -1.12
POLR2A-209ENST00000617998 NCR3O14931 201 aa8.07□□□□□ -1.12
POLR2A-209ENST00000617998 ESDP10768 282 aa8.06□□□□□ -1.12
POLR2A-209ENST00000617998 DSCR8Q96T75 97 aa8.06□□□□□ -1.12
POLR2A-209ENST00000617998 UQCR10Q9UDW1 63 aa8.06□□□□□ -1.12
POLR2A-209ENST00000617998 NUP210LQ5VU65 1888 aa8.06□□□□□ -1.12
POLR2A-209ENST00000617998 PCNX3Q9H6A9 2034 aa8.06□□□□□ -1.12
POLR2A-209ENST00000617998 DKK2Q9UBU2 259 aa8.06□□□□□ -1.12
POLR2A-209ENST00000617998 RAI1Q7Z5J4 1906 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms