RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 VSIG2Q96IQ7 327 aa5.59□□□□□ -1.51
PDE6A-205ENST00000617647 WISP2O76076 250 aa5.59□□□□□ -1.51
PDE6A-205ENST00000617647 XCL1P47992 114 aa5.59□□□□□ -1.51
PDE6A-205ENST00000617647 PMAIP1Q13794 54 aa5.59□□□□□ -1.51
PDE6A-205ENST00000617647 TMEM61Q8N0U2 210 aa5.59□□□□□ -1.51
PDE6A-205ENST00000617647 LINC01561Q8N1V8 128 aa5.59□□□□□ -1.51
PDE6A-205ENST00000617647 C2orf48Q96LS8 159 aa5.59□□□□□ -1.51
PDE6A-205ENST00000617647 XCL2Q9UBD3 114 aa5.59□□□□□ -1.51
PDE6A-205ENST00000617647 C5orf42Q9H799 3197 aa5.59□□□□□ -1.51
PDE6A-205ENST00000617647 GNRH2O43555 120 aa5.59□□□□□ -1.51
PDE6A-205ENST00000617647 HOXB4P17483 251 aaPredicted RBP5.59□□□□□ -1.51
PDE6A-205ENST00000617647 Q5XG85 94 aa5.59□□□□□ -1.51
PDE6A-205ENST00000617647 Q6JHZ5 121 aa5.59□□□□□ -1.51
PDE6A-205ENST00000617647 XIRP2A4UGR9 3374 aa5.59□□□□□ -1.51
PDE6A-205ENST00000617647 IGHV3-73A0A0B4J1V6 119 aa5.58□□□□□ -1.52
PDE6A-205ENST00000617647 F8WEM9 126 aa5.58□□□□□ -1.52
PDE6A-205ENST00000617647 SNRPD3P62318 126 aaKnown RBP5.58□□□□□ -1.52
PDE6A-205ENST00000617647 SPTBN2O15020 2390 aa5.58□□□□□ -1.52
PDE6A-205ENST00000617647 IGHV1-3A0A0C4DH29 117 aa5.58□□□□□ -1.52
PDE6A-205ENST00000617647 IGHV1-18A0A0C4DH31 117 aa5.58□□□□□ -1.52
PDE6A-205ENST00000617647 NBR2O15453 112 aa5.58□□□□□ -1.52
PDE6A-205ENST00000617647 Q9H8V8 135 aa5.58□□□□□ -1.52
PDE6A-205ENST00000617647 PCSK5Q92824 1860 aa5.58□□□□□ -1.52
PDE6A-205ENST00000617647 IGKV3OR2-268A0A0C4DH90 116 aa5.58□□□□□ -1.52
PDE6A-205ENST00000617647 K7EIM0 57 aa5.58□□□□□ -1.52
PDE6A-205ENST00000617647 LINC00158P58513 81 aa5.58□□□□□ -1.52
PDE6A-205ENST00000617647 FHL2Q14192 279 aa5.58□□□□□ -1.52
PDE6A-205ENST00000617647 C17orf82Q86X59 251 aaPredicted RBP5.58□□□□□ -1.52
PDE6A-205ENST00000617647 UPK3BQ9BT76 320 aa5.58□□□□□ -1.52
PDE6A-205ENST00000617647 IGHV1OR15-1A0A075B7D0 117 aa5.58□□□□□ -1.52
PDE6A-205ENST00000617647 LINC01546A6NGU7 62 aa5.58□□□□□ -1.52
PDE6A-205ENST00000617647 PAX4O43316 350 aa5.58□□□□□ -1.52
PDE6A-205ENST00000617647 WT1P19544 449 aaPredicted RBP5.58□□□□□ -1.52
PDE6A-205ENST00000617647 SUMO4Q6EEV6 95 aa5.58□□□□□ -1.52
PDE6A-205ENST00000617647 CNFNQ9BYD5 112 aa5.58□□□□□ -1.52
PDE6A-205ENST00000617647 IGLV2-23P01705 113 aa5.57□□□□□ -1.52
PDE6A-205ENST00000617647 TRBV12-3P01733 135 aa5.57□□□□□ -1.52
PDE6A-205ENST00000617647 CACNA1HO95180 2353 aa5.57□□□□□ -1.52
PDE6A-205ENST00000617647 A8MZ25 164 aa5.57□□□□□ -1.52
PDE6A-205ENST00000617647 F6UB75 175 aa5.57□□□□□ -1.52
PDE6A-205ENST00000617647 BUB3O43684 328 aa5.57□□□□□ -1.52
PDE6A-205ENST00000617647 C5orf38Q86SI9 138 aa5.57□□□□□ -1.52
PDE6A-205ENST00000617647 HILS1P60008 231 aa5.57□□□□□ -1.52
PDE6A-205ENST00000617647 RPL36AP83881 106 aaKnown RBP5.57□□□□□ -1.52
PDE6A-205ENST00000617647 C9orf139Q6ZV77 190 aa5.57□□□□□ -1.52
PDE6A-205ENST00000617647 RPL36ALQ969Q0 106 aaKnown RBP5.57□□□□□ -1.52
PDE6A-205ENST00000617647 C11orf21Q9P2W6 132 aa5.57□□□□□ -1.52
PDE6A-205ENST00000617647 ZNF580Q9UK33 172 aa5.57□□□□□ -1.52
PDE6A-205ENST00000617647 IGHV1-58A0A0C4DH39 117 aa5.56□□□□□ -1.52
PDE6A-205ENST00000617647 NCR3O14931 201 aa5.56□□□□□ -1.52
PDE6A-205ENST00000617647 LECT2O14960 151 aa5.56□□□□□ -1.52
PDE6A-205ENST00000617647 IGHV1-46P01743 117 aa5.56□□□□□ -1.52
PDE6A-205ENST00000617647 IGHV1-8P0DP01 117 aa5.56□□□□□ -1.52
PDE6A-205ENST00000617647 CEP192Q8TEP8 1941 aa5.56□□□□□ -1.52
PDE6A-205ENST00000617647 CYSTM1Q9H1C7 97 aa5.56□□□□□ -1.52
PDE6A-205ENST00000617647 LAMTOR3Q9UHA4 124 aa5.56□□□□□ -1.52
PDE6A-205ENST00000617647 SORL1Q92673 2214 aa5.56□□□□□ -1.52
PDE6A-205ENST00000617647 ABCA4P78363 2273 aa5.56□□□□□ -1.52
PDE6A-205ENST00000617647 TRAV13-2A0A0B4J235 113 aa5.56□□□□□ -1.52
PDE6A-205ENST00000617647 TRBV7-6A0A0J9YX20 115 aa5.55□□□□□ -1.52
PDE6A-205ENST00000617647 SS18Q15532 418 aa5.55□□□□□ -1.52
PDE6A-205ENST00000617647 C15orf32Q32M92 178 aa5.55□□□□□ -1.52
PDE6A-205ENST00000617647 NCOR1O75376 2440 aa5.55□□□□□ -1.52
PDE6A-205ENST00000617647 OXTP01178 125 aa5.55□□□□□ -1.52
PDE6A-205ENST00000617647 CGB3P0DN86 165 aa5.55□□□□□ -1.52
PDE6A-205ENST00000617647 CGB7P0DN87 165 aa5.55□□□□□ -1.52
PDE6A-205ENST00000617647 MRPS36P82909 103 aaKnown RBP5.55□□□□□ -1.52
PDE6A-205ENST00000617647 Q0VFX4 171 aa5.55□□□□□ -1.52
PDE6A-205ENST00000617647 ADAMTSL4-AS1Q5T5F5 129 aa5.55□□□□□ -1.52
PDE6A-205ENST00000617647 SZT2Q5T011 3432 aa5.55□□□□□ -1.52
PDE6A-205ENST00000617647 PRB2P02812 416 aaPredicted RBP5.55□□□□□ -1.52
PDE6A-205ENST00000617647 NBL1P41271 181 aa5.55□□□□□ -1.52
PDE6A-205ENST00000617647 LINC00846Q9NV44 126 aa5.55□□□□□ -1.52
PDE6A-205ENST00000617647 IGHV7-4-1A0A0J9YVY3 117 aa5.54□□□□□ -1.52
PDE6A-205ENST00000617647 TEX22C9J3V5 150 aa5.54□□□□□ -1.52
PDE6A-205ENST00000617647 LPAL2Q16609 132 aa5.54□□□□□ -1.52
PDE6A-205ENST00000617647 DEFB121Q5J5C9 76 aa5.54□□□□□ -1.52
PDE6A-205ENST00000617647 DCANP1Q8TF63 244 aa5.54□□□□□ -1.52
PDE6A-205ENST00000617647 ORMDL1Q9P0S3 153 aa5.54□□□□□ -1.52
PDE6A-205ENST00000617647 IGIPA6NJ69 53 aa5.54□□□□□ -1.52
PDE6A-205ENST00000617647 IGHV1-69P01742 117 aa5.54□□□□□ -1.52
PDE6A-205ENST00000617647 CACNA1GO43497 2377 aa5.54□□□□□ -1.52
PDE6A-205ENST00000617647 BLCAPP62952 87 aa5.54□□□□□ -1.52
PDE6A-205ENST00000617647 LYPD2Q6UXB3 125 aa5.54□□□□□ -1.52
PDE6A-205ENST00000617647 RMI2Q96E14 147 aa5.54□□□□□ -1.52
PDE6A-205ENST00000617647 J3QL48 77 aa5.53□□□□□ -1.52
PDE6A-205ENST00000617647 ZNF672Q499Z4 452 aaPredicted RBP5.53□□□□□ -1.52
PDE6A-205ENST00000617647 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.53□□□□□ -1.52
PDE6A-205ENST00000617647 SLPIP03973 132 aa5.53□□□□□ -1.52
PDE6A-205ENST00000617647 PIK3CD-AS1Q5SR53 167 aa5.53□□□□□ -1.52
PDE6A-205ENST00000617647 LINC00308Q8TCZ7 52 aa5.53□□□□□ -1.52
PDE6A-205ENST00000617647 LINC00474Q9P2X8 69 aa5.53□□□□□ -1.52
PDE6A-205ENST00000617647 SPRR3Q9UBC9 169 aa5.53□□□□□ -1.52
PDE6A-205ENST00000617647 C10orf142B7Z368 130 aa5.53□□□□□ -1.52
PDE6A-205ENST00000617647 FAM19A1Q7Z5A9 133 aa5.53□□□□□ -1.52
PDE6A-205ENST00000617647 DYNLRB2Q8TF09 96 aa5.53□□□□□ -1.52
PDE6A-205ENST00000617647 DPM3Q9P2X0 92 aa5.53□□□□□ -1.52
PDE6A-205ENST00000617647 SPTSSBQ8NFR3 76 aa5.52□□□□□ -1.53
PDE6A-205ENST00000617647 CREBBPQ92793 2442 aa5.52□□□□□ -1.53
PDE6A-205ENST00000617647 TRBV27A0A0K0K1C4 114 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms