RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 SMCO4Q9NRQ5 59 aa10.82□□□□□ -0.68
PCDHGC3-204ENST00000617222 TRBV7-3A0A075B6L6 115 aa10.81□□□□□ -0.68
PCDHGC3-204ENST00000617222 GAS8-AS1O95177 125 aa10.81□□□□□ -0.68
PCDHGC3-204ENST00000617222 ESRGQ1W209 222 aa10.81□□□□□ -0.68
PCDHGC3-204ENST00000617222 SH2D6Q7Z4S9 175 aa10.81□□□□□ -0.68
PCDHGC3-204ENST00000617222 CBLN2Q8IUK8 224 aa10.81□□□□□ -0.68
PCDHGC3-204ENST00000617222 ATP6V0E2Q8NHE4 81 aa10.81□□□□□ -0.68
PCDHGC3-204ENST00000617222 MRAP2Q96G30 205 aa10.81□□□□□ -0.68
PCDHGC3-204ENST00000617222 NIT2Q9NQR4 276 aa10.81□□□□□ -0.68
PCDHGC3-204ENST00000617222 TNFRSF18Q9Y5U5 241 aa10.81□□□□□ -0.68
PCDHGC3-204ENST00000617222 CSMD3Q7Z407 3707 aa10.81□□□□□ -0.68
PCDHGC3-204ENST00000617222 SMKR1H3BMG3 65 aa10.8□□□□□ -0.68
PCDHGC3-204ENST00000617222 ATP6V1G1O75348 118 aa10.8□□□□□ -0.68
PCDHGC3-204ENST00000617222 LINC00694P0DN24 101 aa10.8□□□□□ -0.68
PCDHGC3-204ENST00000617222 LYPD5Q6UWN5 251 aa10.8□□□□□ -0.68
PCDHGC3-204ENST00000617222 TMEM136Q6ZRR5 245 aa10.8□□□□□ -0.68
PCDHGC3-204ENST00000617222 FRZBQ92765 325 aa10.8□□□□□ -0.68
PCDHGC3-204ENST00000617222 RPL39LQ96EH5 51 aaKnown RBP10.8□□□□□ -0.68
PCDHGC3-204ENST00000617222 DNAJC30Q96LL9 226 aa10.8□□□□□ -0.68
PCDHGC3-204ENST00000617222 NCR2O95944 276 aa10.79□□□□□ -0.68
PCDHGC3-204ENST00000617222 CCL18P55774 89 aa10.79□□□□□ -0.68
PCDHGC3-204ENST00000617222 UBE2D3P61077 147 aa10.79□□□□□ -0.68
PCDHGC3-204ENST00000617222 UBE2D2P62837 147 aa10.79□□□□□ -0.68
PCDHGC3-204ENST00000617222 TRBV24-1A0A075B6N3 115 aa10.78□□□□□ -0.68
PCDHGC3-204ENST00000617222 S100A1P23297 94 aa10.78□□□□□ -0.68
PCDHGC3-204ENST00000617222 CKS2P33552 79 aa10.78□□□□□ -0.68
PCDHGC3-204ENST00000617222 RPS10P46783 165 aaKnown RBP10.78□□□□□ -0.68
PCDHGC3-204ENST00000617222 OR10J3Q5JRS4 329 aa10.78□□□□□ -0.68
PCDHGC3-204ENST00000617222 UBE2DNLQ8IWF7 75 aa10.78□□□□□ -0.68
PCDHGC3-204ENST00000617222 YPEL4Q96NS1 127 aa10.78□□□□□ -0.68
PCDHGC3-204ENST00000617222 GNB1LQ9BYB4 327 aa10.78□□□□□ -0.68
PCDHGC3-204ENST00000617222 LINC00588Q9Y4M8 146 aa10.78□□□□□ -0.68
PCDHGC3-204ENST00000617222 PLECQ15149 4684 aaKnown RBP10.78□□□□□ -0.68
PCDHGC3-204ENST00000617222 IGHV3-38A0A0C4DH36 116 aa10.77□□□□□ -0.69
PCDHGC3-204ENST00000617222 SCO1O75880 301 aa10.77□□□□□ -0.69
PCDHGC3-204ENST00000617222 COX19Q49B96 90 aa10.77□□□□□ -0.69
PCDHGC3-204ENST00000617222 LGALS9CQ6DKI2 356 aa10.77□□□□□ -0.69
PCDHGC3-204ENST00000617222 GTSF1LQ9H1H1 148 aa10.77□□□□□ -0.69
PCDHGC3-204ENST00000617222 D6R8Y8 96 aa10.76□□□□□ -0.69
PCDHGC3-204ENST00000617222 LY6G6CO95867 125 aa10.76□□□□□ -0.69
PCDHGC3-204ENST00000617222 HLA-DQA1P01909 254 aa10.76□□□□□ -0.69
PCDHGC3-204ENST00000617222 NRACQ8N912 160 aa10.76□□□□□ -0.69
PCDHGC3-204ENST00000617222 TENM2Q9NT68 2774 aa10.75□□□□□ -0.69
PCDHGC3-204ENST00000617222 APCSP02743 223 aa10.75□□□□□ -0.69
PCDHGC3-204ENST00000617222 PPBPP02775 128 aa10.75□□□□□ -0.69
PCDHGC3-204ENST00000617222 TIRAPP58753 221 aa10.75□□□□□ -0.69
PCDHGC3-204ENST00000617222 DAZ4Q86SG3 579 aaKnown RBP10.75□□□□□ -0.69
PCDHGC3-204ENST00000617222 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.75□□□□□ -0.69
PCDHGC3-204ENST00000617222 LINC00476Q8WZB0 136 aa10.75□□□□□ -0.69
PCDHGC3-204ENST00000617222 ST20Q9HBF5 79 aa10.75□□□□□ -0.69
PCDHGC3-204ENST00000617222 DAZ3Q9NR90 486 aaKnown RBP10.75□□□□□ -0.69
PCDHGC3-204ENST00000617222 TRBV6-5A0A0K0K1A5 114 aa10.74□□□□□ -0.69
PCDHGC3-204ENST00000617222 SDHAF1A6NFY7 115 aa10.74□□□□□ -0.69
PCDHGC3-204ENST00000617222 PPP1R17O96001 155 aa10.74□□□□□ -0.69
PCDHGC3-204ENST00000617222 KIAA1644Q3SXP7 199 aa10.74□□□□□ -0.69
PCDHGC3-204ENST00000617222 ORMDL3Q8N138 153 aa10.74□□□□□ -0.69
PCDHGC3-204ENST00000617222 DEFB104AQ8WTQ1 72 aa10.74□□□□□ -0.69
PCDHGC3-204ENST00000617222 MRPS16Q9Y3D3 137 aaKnown RBP10.74□□□□□ -0.69
PCDHGC3-204ENST00000617222 TNFRSF6BO95407 300 aa10.73□□□□□ -0.69
PCDHGC3-204ENST00000617222 NPYP01303 97 aa10.73□□□□□ -0.69
PCDHGC3-204ENST00000617222 MT-ND6P03923 174 aa10.73□□□□□ -0.69
PCDHGC3-204ENST00000617222 FABP9Q0Z7S8 132 aa10.73□□□□□ -0.69
PCDHGC3-204ENST00000617222 PRELID3AQ96N28 172 aa10.73□□□□□ -0.69
PCDHGC3-204ENST00000617222 MRPL18Q9H0U6 180 aaKnown RBP10.73□□□□□ -0.69
PCDHGC3-204ENST00000617222 TRAPPC1Q9Y5R8 145 aa10.73□□□□□ -0.69
PCDHGC3-204ENST00000617222 LELP1Q5T871 98 aa10.72□□□□□ -0.69
PCDHGC3-204ENST00000617222 TMEM70Q9BUB7 260 aa10.72□□□□□ -0.69
PCDHGC3-204ENST00000617222 PMCHP20382 165 aa10.71□□□□□ -0.69
PCDHGC3-204ENST00000617222 POLR2KP53803 58 aaKnown RBP10.71□□□□□ -0.69
PCDHGC3-204ENST00000617222 SUMO2P61956 95 aaKnown RBP10.71□□□□□ -0.69
PCDHGC3-204ENST00000617222 NTM-AS1Q6ZSK4 140 aa10.71□□□□□ -0.69
PCDHGC3-204ENST00000617222 C20orf78Q9BR46 151 aa10.71□□□□□ -0.69
PCDHGC3-204ENST00000617222 TRAV8-6A0A0B4J262 113 aa10.7□□□□□ -0.7
PCDHGC3-204ENST00000617222 LCE6AA0A183 80 aa10.7□□□□□ -0.7
PCDHGC3-204ENST00000617222 COLCA2A8K830 154 aa10.7□□□□□ -0.7
PCDHGC3-204ENST00000617222 I3L3M4 83 aa10.7□□□□□ -0.7
PCDHGC3-204ENST00000617222 VCYO14598 125 aa10.7□□□□□ -0.7
PCDHGC3-204ENST00000617222 PHOX2AO14813 284 aa10.7□□□□□ -0.7
PCDHGC3-204ENST00000617222 TMEM97Q5BJF2 176 aa10.7□□□□□ -0.7
PCDHGC3-204ENST00000617222 UPK3BQ9BT76 320 aa10.7□□□□□ -0.7
PCDHGC3-204ENST00000617222 Q9H8V8 135 aa10.7□□□□□ -0.7
PCDHGC3-204ENST00000617222 TRBV6-8A0A0A6YYG3 113 aa10.69□□□□□ -0.7
PCDHGC3-204ENST00000617222 COTL1Q14019 142 aa10.69□□□□□ -0.7
PCDHGC3-204ENST00000617222 WFDC10BQ8IUB3 73 aa10.69□□□□□ -0.7
PCDHGC3-204ENST00000617222 LAMTOR2Q9Y2Q5 125 aa10.69□□□□□ -0.7
PCDHGC3-204ENST00000617222 ALMS1Q8TCU4 4167 aa10.67□□□□□ -0.7
PCDHGC3-204ENST00000617222 IGHV1-24A0A0C4DH33 117 aa10.67□□□□□ -0.7
PCDHGC3-204ENST00000617222 TRBV27A0A0K0K1C4 114 aa10.67□□□□□ -0.7
PCDHGC3-204ENST00000617222 LOC389332A0A1B0GUA5 103 aa10.67□□□□□ -0.7
PCDHGC3-204ENST00000617222 SIVA1O15304 175 aa10.67□□□□□ -0.7
PCDHGC3-204ENST00000617222 RPL32P62910 135 aaKnown RBP10.67□□□□□ -0.7
PCDHGC3-204ENST00000617222 ALKBH7Q9BT30 221 aaPredicted RBP10.67□□□□□ -0.7
PCDHGC3-204ENST00000617222 MAP1LC3AQ9H492 121 aa10.67□□□□□ -0.7
PCDHGC3-204ENST00000617222 IGLV2-18A0A075B6J9 118 aa10.66□□□□□ -0.7
PCDHGC3-204ENST00000617222 TRBV25-1A0A075B6N4 114 aa10.66□□□□□ -0.7
PCDHGC3-204ENST00000617222 TSHBP01222 138 aa10.66□□□□□ -0.7
PCDHGC3-204ENST00000617222 RAB5AP20339 215 aa10.66□□□□□ -0.7
PCDHGC3-204ENST00000617222 IQCJQ1A5X6 159 aa10.66□□□□□ -0.7
PCDHGC3-204ENST00000617222 CHCHD5Q9BSY4 110 aa10.66□□□□□ -0.7
PCDHGC3-204ENST00000617222 SMIM2Q9BVW6 85 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms