RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 ATRAIDQ6UW56 229 aa6.39□□□□□ -1.39
TARDBP-218ENST00000617172 BAALCQ8WXS3 180 aa6.39□□□□□ -1.39
TARDBP-218ENST00000617172 AP1S3Q96PC3 154 aa6.39□□□□□ -1.39
TARDBP-218ENST00000617172 H7C1H1 209 aa6.38□□□□□ -1.39
TARDBP-218ENST00000617172 LECT2O14960 151 aa6.38□□□□□ -1.39
TARDBP-218ENST00000617172 IFNA1P01562 189 aa6.38□□□□□ -1.39
TARDBP-218ENST00000617172 TAGLN2P37802 199 aaKnown RBP6.38□□□□□ -1.39
TARDBP-218ENST00000617172 GNG4P50150 75 aa6.38□□□□□ -1.39
TARDBP-218ENST00000617172 MEF2BQ02080 365 aaPredicted RBP6.38□□□□□ -1.39
TARDBP-218ENST00000617172 WFDC2Q14508 124 aa6.38□□□□□ -1.39
TARDBP-218ENST00000617172 C14orf177Q52M58 125 aa6.38□□□□□ -1.39
TARDBP-218ENST00000617172 CENPWQ5EE01 88 aa6.38□□□□□ -1.39
TARDBP-218ENST00000617172 TCTE3Q8IZS6 198 aa6.38□□□□□ -1.39
TARDBP-218ENST00000617172 FER1L6-AS1Q8NA97 138 aa6.38□□□□□ -1.39
TARDBP-218ENST00000617172 DERL1Q9BUN8 251 aa6.38□□□□□ -1.39
TARDBP-218ENST00000617172 C1orf43Q9BWL3 253 aa6.38□□□□□ -1.39
TARDBP-218ENST00000617172 VAX2Q9UIW0 290 aa6.38□□□□□ -1.39
TARDBP-218ENST00000617172 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.37□□□□□ -1.39
TARDBP-218ENST00000617172 MUC21A0A0G2JKD1 596 aa6.37□□□□□ -1.39
TARDBP-218ENST00000617172 MUC21A0A140T8X8 626 aa6.37□□□□□ -1.39
TARDBP-218ENST00000617172 P01737 135 aa6.37□□□□□ -1.39
TARDBP-218ENST00000617172 CRPP02741 224 aa6.37□□□□□ -1.39
TARDBP-218ENST00000617172 SSTP61278 116 aa6.37□□□□□ -1.39
TARDBP-218ENST00000617172 CACNG7P62955 275 aa6.37□□□□□ -1.39
TARDBP-218ENST00000617172 Q6ZSA8 131 aa6.37□□□□□ -1.39
TARDBP-218ENST00000617172 SLC51BQ86UW2 128 aa6.37□□□□□ -1.39
TARDBP-218ENST00000617172 OR2D3Q8NGH3 330 aa6.37□□□□□ -1.39
TARDBP-218ENST00000617172 DNAJC30Q96LL9 226 aa6.37□□□□□ -1.39
TARDBP-218ENST00000617172 CHCHD5Q9BSY4 110 aa6.37□□□□□ -1.39
TARDBP-218ENST00000617172 MED9Q9NWA0 146 aa6.37□□□□□ -1.39
TARDBP-218ENST00000617172 FAM30AQ9NZY2 134 aa6.37□□□□□ -1.39
TARDBP-218ENST00000617172 KIF25-AS1Q9Y6Z4 181 aa6.37□□□□□ -1.39
TARDBP-218ENST00000617172 RAB19A4D1S5 217 aa6.36□□□□□ -1.39
TARDBP-218ENST00000617172 C19orf71A6NCJ1 209 aa6.36□□□□□ -1.39
TARDBP-218ENST00000617172 IGLV2-8P01709 118 aa6.36□□□□□ -1.39
TARDBP-218ENST00000617172 ANGP03950 147 aaKnown RBP6.36□□□□□ -1.39
TARDBP-218ENST00000617172 PLA2G1BP04054 148 aaKnown RBP6.36□□□□□ -1.39
TARDBP-218ENST00000617172 IGLC6P0CF74 106 aa6.36□□□□□ -1.39
TARDBP-218ENST00000617172 MIAQ16674 131 aa6.36□□□□□ -1.39
TARDBP-218ENST00000617172 LINC00528Q8N1L1 170 aa6.36□□□□□ -1.39
TARDBP-218ENST00000617172 C15orf54Q8N8G6 183 aa6.36□□□□□ -1.39
TARDBP-218ENST00000617172 TPPP3Q9BW30 176 aa6.36□□□□□ -1.39
TARDBP-218ENST00000617172 TRBV25-1A0A075B6N4 114 aa6.35□□□□□ -1.39
TARDBP-218ENST00000617172 M0QY20 66 aa6.35□□□□□ -1.39
TARDBP-218ENST00000617172 TRGC1P0CF51 173 aa6.35□□□□□ -1.39
TARDBP-218ENST00000617172 BCL2P10415 239 aa6.35□□□□□ -1.39
TARDBP-218ENST00000617172 SMCPP49901 116 aaPredicted RBP6.35□□□□□ -1.39
TARDBP-218ENST00000617172 HAMPP81172 84 aa6.35□□□□□ -1.39
TARDBP-218ENST00000617172 MPV17L2Q567V2 206 aa6.35□□□□□ -1.39
TARDBP-218ENST00000617172 WDR73Q6P4I2 378 aa6.35□□□□□ -1.39
TARDBP-218ENST00000617172 ENHOQ6UWT2 76 aa6.35□□□□□ -1.39
TARDBP-218ENST00000617172 C9orf62Q8N4C0 152 aa6.35□□□□□ -1.39
TARDBP-218ENST00000617172 IGHV1-24A0A0C4DH33 117 aa6.34□□□□□ -1.39
TARDBP-218ENST00000617172 MGPP08493 103 aa6.34□□□□□ -1.39
TARDBP-218ENST00000617172 GZMBP10144 247 aa6.34□□□□□ -1.39
TARDBP-218ENST00000617172 NTF3P20783 257 aa6.34□□□□□ -1.39
TARDBP-218ENST00000617172 IQCJQ1A5X6 159 aa6.34□□□□□ -1.39
TARDBP-218ENST00000617172 NTM-AS1Q6ZSK4 140 aa6.34□□□□□ -1.39
TARDBP-218ENST00000617172 PRR34Q9NV39 138 aa6.34□□□□□ -1.39
TARDBP-218ENST00000617172 SRRM2Q9UQ35 2752 aaKnown RBP6.33□□□□□ -1.4
TARDBP-218ENST00000617172 RBX1P62877 108 aa6.33□□□□□ -1.4
TARDBP-218ENST00000617172 SUMO4Q6EEV6 95 aa6.33□□□□□ -1.4
TARDBP-218ENST00000617172 DGAT2L7PQ6IED9 249 aa6.33□□□□□ -1.4
TARDBP-218ENST00000617172 RASL11AQ6T310 242 aa6.33□□□□□ -1.4
TARDBP-218ENST00000617172 LYZL1Q6UWQ5 148 aa6.33□□□□□ -1.4
TARDBP-218ENST00000617172 CHAC1Q9BUX1 264 aa6.33□□□□□ -1.4
TARDBP-218ENST00000617172 DPH3P1Q9H4G8 78 aa6.33□□□□□ -1.4
TARDBP-218ENST00000617172 NIT2Q9NQR4 276 aa6.33□□□□□ -1.4
TARDBP-218ENST00000617172 TRBV20OR9-2A0A075B6H5 130 aa6.32□□□□□ -1.4
TARDBP-218ENST00000617172 A0A1B0GUV1 79 aa6.32□□□□□ -1.4
TARDBP-218ENST00000617172 GAGE6Q13070 117 aa6.32□□□□□ -1.4
TARDBP-218ENST00000617172 LINC00269Q8N2A0 174 aa6.32□□□□□ -1.4
TARDBP-218ENST00000617172 NUDT10Q8NFP7 164 aa6.32□□□□□ -1.4
TARDBP-218ENST00000617172 NUDT11Q96G61 164 aa6.32□□□□□ -1.4
TARDBP-218ENST00000617172 PGLYRP4Q96LB8 373 aa6.32□□□□□ -1.4
TARDBP-218ENST00000617172 TRAV8-4A0A0B4J246 113 aa6.31□□□□□ -1.4
TARDBP-218ENST00000617172 CTRLP40313 264 aa6.31□□□□□ -1.4
TARDBP-218ENST00000617172 NKX2-5P52952 324 aaPredicted RBP6.31□□□□□ -1.4
TARDBP-218ENST00000617172 BLOC1S1P78537 153 aa6.31□□□□□ -1.4
TARDBP-218ENST00000617172 TWIST1Q15672 202 aa6.31□□□□□ -1.4
TARDBP-218ENST00000617172 LINC01620Q4KN68 170 aa6.31□□□□□ -1.4
TARDBP-218ENST00000617172 SMIM15Q7Z3B0 74 aa6.31□□□□□ -1.4
TARDBP-218ENST00000617172 CLRN3Q8NCR9 226 aa6.31□□□□□ -1.4
TARDBP-218ENST00000617172 OCC1Q8TAD7 63 aa6.31□□□□□ -1.4
TARDBP-218ENST00000617172 DEFB104AQ8WTQ1 72 aa6.31□□□□□ -1.4
TARDBP-218ENST00000617172 TMEM243Q9BU79 118 aa6.31□□□□□ -1.4
TARDBP-218ENST00000617172 CNFNQ9BYD5 112 aa6.31□□□□□ -1.4
TARDBP-218ENST00000617172 RPP21Q9H633 154 aaKnown RBP6.31□□□□□ -1.4
TARDBP-218ENST00000617172 USP17L23D6RBM5 183 aa6.3□□□□□ -1.4
TARDBP-218ENST00000617172 TMEM250H0YL14 139 aa6.3□□□□□ -1.4
TARDBP-218ENST00000617172 HLA-DQA1P01909 254 aa6.3□□□□□ -1.4
TARDBP-218ENST00000617172 REG3AQ06141 175 aa6.3□□□□□ -1.4
TARDBP-218ENST00000617172 COTL1Q14019 142 aa6.3□□□□□ -1.4
TARDBP-218ENST00000617172 TEX261Q6UWH6 196 aa6.3□□□□□ -1.4
TARDBP-218ENST00000617172 Q6ZNX1 250 aa6.3□□□□□ -1.4
TARDBP-218ENST00000617172 SCXQ7RTU7 201 aa6.3□□□□□ -1.4
TARDBP-218ENST00000617172 AKAP14Q86UN6 197 aa6.3□□□□□ -1.4
TARDBP-218ENST00000617172 DMBT1Q9UGM3 2413 aaPredicted RBP6.29□□□□□ -1.4
TARDBP-218ENST00000617172 FAT1Q14517 4588 aa6.29□□□□□ -1.4
TARDBP-218ENST00000617172 UBE2L6O14933 153 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms