RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 MBD3L1Q8WWY6 194 aa13.47□□□□□ -0.25
TRAPPC3-208ENST00000616074 USP17L23D6RBM5 183 aa13.46□□□□□ -0.25
TRAPPC3-208ENST00000616074 OR5AL1P0C617 328 aa13.46□□□□□ -0.25
TRAPPC3-208ENST00000616074 SPANXN1Q5VSR9 72 aa13.46□□□□□ -0.25
TRAPPC3-208ENST00000616074 NTM-AS1Q6ZSK4 140 aa13.46□□□□□ -0.25
TRAPPC3-208ENST00000616074 F5H697 171 aa13.45□□□□□ -0.26
TRAPPC3-208ENST00000616074 PFDN1O60925 122 aa13.45□□□□□ -0.26
TRAPPC3-208ENST00000616074 SSTP61278 116 aa13.45□□□□□ -0.26
TRAPPC3-208ENST00000616074 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC3-208ENST00000616074 PKIAP61925 76 aa13.44□□□□□ -0.26
TRAPPC3-208ENST00000616074 MIAQ16674 131 aa13.44□□□□□ -0.26
TRAPPC3-208ENST00000616074 KCNRGQ8N5I3 272 aa13.44□□□□□ -0.26
TRAPPC3-208ENST00000616074 VAX2Q9UIW0 290 aa13.44□□□□□ -0.26
TRAPPC3-208ENST00000616074 PRSS1P07477 247 aa13.43□□□□□ -0.26
TRAPPC3-208ENST00000616074 ZNF345Q14585 488 aa13.43□□□□□ -0.26
TRAPPC3-208ENST00000616074 CLPSL2Q6UWE3 100 aa13.43□□□□□ -0.26
TRAPPC3-208ENST00000616074 KIF25-AS1Q9Y6Z4 181 aa13.43□□□□□ -0.26
TRAPPC3-208ENST00000616074 UMAD1C9J7I0 102 aa13.42□□□□□ -0.26
TRAPPC3-208ENST00000616074 TMEM97Q5BJF2 176 aa13.42□□□□□ -0.26
TRAPPC3-208ENST00000616074 DERL1Q9BUN8 251 aa13.42□□□□□ -0.26
TRAPPC3-208ENST00000616074 PRR34Q9NV39 138 aa13.42□□□□□ -0.26
TRAPPC3-208ENST00000616074 OXTP01178 125 aa13.41□□□□□ -0.26
TRAPPC3-208ENST00000616074 RBX1P62877 108 aa13.41□□□□□ -0.26
TRAPPC3-208ENST00000616074 GAGE6Q13070 117 aa13.41□□□□□ -0.26
TRAPPC3-208ENST00000616074 RGS21Q2M5E4 152 aa13.41□□□□□ -0.26
TRAPPC3-208ENST00000616074 TMUB2Q71RG4 321 aa13.41□□□□□ -0.26
TRAPPC3-208ENST00000616074 AP1S3Q96PC3 154 aa13.41□□□□□ -0.26
TRAPPC3-208ENST00000616074 SMIM17P0DL12 118 aa13.4□□□□□ -0.26
TRAPPC3-208ENST00000616074 KRTAP26-1Q6PEX3 210 aa13.4□□□□□ -0.26
TRAPPC3-208ENST00000616074 LINC00269Q8N2A0 174 aa13.4□□□□□ -0.26
TRAPPC3-208ENST00000616074 H2AFB1P0C5Y9 115 aa13.39□□□□□ -0.27
TRAPPC3-208ENST00000616074 RPL35P42766 123 aaKnown RBP13.39□□□□□ -0.27
TRAPPC3-208ENST00000616074 RPL37AP61513 92 aaKnown RBP13.39□□□□□ -0.27
TRAPPC3-208ENST00000616074 SERTAD4-AS1Q5TG53 156 aa13.39□□□□□ -0.27
TRAPPC3-208ENST00000616074 UBR4Q5T4S7 5183 aa13.38□□□□□ -0.27
TRAPPC3-208ENST00000616074 TRBV25-1A0A075B6N4 114 aa13.38□□□□□ -0.27
TRAPPC3-208ENST00000616074 DGAT2L7PQ6IED9 249 aa13.38□□□□□ -0.27
TRAPPC3-208ENST00000616074 C9orf163Q8N9P6 203 aa13.38□□□□□ -0.27
TRAPPC3-208ENST00000616074 BCL2L11O43521 198 aa13.37□□□□□ -0.27
TRAPPC3-208ENST00000616074 GZMBP10144 247 aa13.37□□□□□ -0.27
TRAPPC3-208ENST00000616074 IQCJQ1A5X6 159 aa13.37□□□□□ -0.27
TRAPPC3-208ENST00000616074 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC3-208ENST00000616074 KANTRA0A1W2PQU2 76 aa13.36□□□□□ -0.27
TRAPPC3-208ENST00000616074 HMSDA8MTL9 139 aa13.36□□□□□ -0.27
TRAPPC3-208ENST00000616074 MGPP08493 103 aa13.36□□□□□ -0.27
TRAPPC3-208ENST00000616074 HNRNPA3P51991 378 aaKnown RBP13.36□□□□□ -0.27
TRAPPC3-208ENST00000616074 TPPP3Q9BW30 176 aa13.36□□□□□ -0.27
TRAPPC3-208ENST00000616074 IGHV1-24A0A0C4DH33 117 aa13.35□□□□□ -0.27
TRAPPC3-208ENST00000616074 PANO1I0J062 215 aa13.35□□□□□ -0.27
TRAPPC3-208ENST00000616074 M0QY20 66 aa13.35□□□□□ -0.27
TRAPPC3-208ENST00000616074 IGLC6P0CF74 106 aa13.35□□□□□ -0.27
TRAPPC3-208ENST00000616074 C11orf52Q96A22 123 aa13.35□□□□□ -0.27
TRAPPC3-208ENST00000616074 DAZAP1Q96EP5 407 aaKnown RBP13.35□□□□□ -0.27
TRAPPC3-208ENST00000616074 IGLV10-54A0A075B6I4 117 aa13.34□□□□□ -0.27
TRAPPC3-208ENST00000616074 A0A0D9SG52 128 aa13.34□□□□□ -0.27
TRAPPC3-208ENST00000616074 CCL20P78556 96 aa13.34□□□□□ -0.27
TRAPPC3-208ENST00000616074 REG3AQ06141 175 aa13.34□□□□□ -0.27
TRAPPC3-208ENST00000616074 CENPWQ5EE01 88 aa13.34□□□□□ -0.27
TRAPPC3-208ENST00000616074 SUMO4Q6EEV6 95 aa13.34□□□□□ -0.27
TRAPPC3-208ENST00000616074 FER1L6-AS1Q8NA97 138 aa13.34□□□□□ -0.27
TRAPPC3-208ENST00000616074 C20orf203Q8NBC4 194 aa13.33□□□□□ -0.28
TRAPPC3-208ENST00000616074 MANBALQ9NQG1 85 aa13.33□□□□□ -0.28
TRAPPC3-208ENST00000616074 GNG13Q9P2W3 67 aa13.33□□□□□ -0.28
TRAPPC3-208ENST00000616074 H7C1H1 209 aa13.32□□□□□ -0.28
TRAPPC3-208ENST00000616074 SDIM1Q6ZPB5 146 aa13.32□□□□□ -0.28
TRAPPC3-208ENST00000616074 OR2D3Q8NGH3 330 aa13.32□□□□□ -0.28
TRAPPC3-208ENST00000616074 C19orf71A6NCJ1 209 aa13.31□□□□□ -0.28
TRAPPC3-208ENST00000616074 NKX2-5P52952 324 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC3-208ENST00000616074 RPS20P60866 119 aaKnown RBP13.31□□□□□ -0.28
TRAPPC3-208ENST00000616074 CLRN3Q8NCR9 226 aa13.31□□□□□ -0.28
TRAPPC3-208ENST00000616074 CACNG7P62955 275 aa13.3□□□□□ -0.28
TRAPPC3-208ENST00000616074 EIF5AP63241 154 aaKnown RBP13.3□□□□□ -0.28
TRAPPC3-208ENST00000616074 GFRA4Q9GZZ7 299 aa13.3□□□□□ -0.28
TRAPPC3-208ENST00000616074 IGLV4-60A0A075B6I1 120 aa13.29□□□□□ -0.28
TRAPPC3-208ENST00000616074 RAB19A4D1S5 217 aa13.29□□□□□ -0.28
TRAPPC3-208ENST00000616074 CNBPP62633 177 aaKnown RBP13.29□□□□□ -0.28
TRAPPC3-208ENST00000616074 TMEM243Q9BU79 118 aa13.29□□□□□ -0.28
TRAPPC3-208ENST00000616074 TRAV8-4A0A0B4J246 113 aa13.28□□□□□ -0.28
TRAPPC3-208ENST00000616074 A0A1B0GUV1 79 aa13.28□□□□□ -0.28
TRAPPC3-208ENST00000616074 hDV102S1A0JD36 115 aa13.28□□□□□ -0.28
TRAPPC3-208ENST00000616074 P01737 135 aa13.28□□□□□ -0.28
TRAPPC3-208ENST00000616074 RASL11AQ6T310 242 aa13.28□□□□□ -0.28
TRAPPC3-208ENST00000616074 PLA2G2DQ9UNK4 145 aa13.28□□□□□ -0.28
TRAPPC3-208ENST00000616074 TRAV1-1A0A0B4J248 108 aa13.27□□□□□ -0.29
TRAPPC3-208ENST00000616074 GNG4P50150 75 aa13.27□□□□□ -0.29
TRAPPC3-208ENST00000616074 CIRBPQ14011 172 aaKnown RBP13.27□□□□□ -0.29
TRAPPC3-208ENST00000616074 RAB5CP51148 216 aa13.26□□□□□ -0.29
TRAPPC3-208ENST00000616074 LYZL1Q6UWQ5 148 aa13.26□□□□□ -0.29
TRAPPC3-208ENST00000616074 SMIM12Q96EX1 92 aa13.26□□□□□ -0.29
TRAPPC3-208ENST00000616074 PGLYRP4Q96LB8 373 aa13.26□□□□□ -0.29
TRAPPC3-208ENST00000616074 F2Z2F3 143 aa13.25□□□□□ -0.29
TRAPPC3-208ENST00000616074 SLPIP03973 132 aa13.25□□□□□ -0.29
TRAPPC3-208ENST00000616074 TRGC1P0CF51 173 aa13.25□□□□□ -0.29
TRAPPC3-208ENST00000616074 DPH3P1Q9H4G8 78 aa13.25□□□□□ -0.29
TRAPPC3-208ENST00000616074 NIT2Q9NQR4 276 aa13.25□□□□□ -0.29
TRAPPC3-208ENST00000616074 TRBV20OR9-2A0A075B6H5 130 aa13.24□□□□□ -0.29
TRAPPC3-208ENST00000616074 XKRY2A2RUG3 117 aa13.24□□□□□ -0.29
TRAPPC3-208ENST00000616074 NTF3P20783 257 aa13.24□□□□□ -0.29
TRAPPC3-208ENST00000616074 MEF2BQ02080 365 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC3-208ENST00000616074 IGHV3-64A0A075B6Q5 118 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms