RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 BPESC1Q9GZL8 116 aa8.95□□□□□ -0.98
CDH5-208ENST00000614547 A0A0J9YY99 117 aa8.95□□□□□ -0.98
CDH5-208ENST00000614547 H3BMM0 161 aa8.95□□□□□ -0.98
CDH5-208ENST00000614547 IFITM1P13164 125 aa8.95□□□□□ -0.98
CDH5-208ENST00000614547 SMCPP49901 116 aaPredicted RBP8.95□□□□□ -0.98
CDH5-208ENST00000614547 NRGNQ92686 78 aa8.95□□□□□ -0.98
CDH5-208ENST00000614547 UBE2WQ96B02 151 aa8.95□□□□□ -0.98
CDH5-208ENST00000614547 TNFRSF18Q9Y5U5 241 aa8.95□□□□□ -0.98
CDH5-208ENST00000614547 TRAV12-1A0A0B4J245 112 aa8.94□□□□□ -0.98
CDH5-208ENST00000614547 M0R1W7 72 aa8.94□□□□□ -0.98
CDH5-208ENST00000614547 TIMM21Q9BVV7 248 aa8.94□□□□□ -0.98
CDH5-208ENST00000614547 IGFL3Q6UXB1 125 aa8.94□□□□□ -0.98
CDH5-208ENST00000614547 CLEC2BQ92478 149 aa8.94□□□□□ -0.98
CDH5-208ENST00000614547 TRBV7-1A0A0A6YYK4 115 aa8.94□□□□□ -0.98
CDH5-208ENST00000614547 TRAV4A0A0B4J268 109 aa8.94□□□□□ -0.98
CDH5-208ENST00000614547 CDIP1Q9H305 208 aa8.94□□□□□ -0.98
CDH5-208ENST00000614547 CELSR2Q9HCU4 2923 aa8.93□□□□□ -0.98
CDH5-208ENST00000614547 IGHV3-16A0A0C4DH30 117 aa8.93□□□□□ -0.98
CDH5-208ENST00000614547 CARD19Q96LW7 228 aa8.93□□□□□ -0.98
CDH5-208ENST00000614547 IGLV2-18A0A075B6J9 118 aa8.93□□□□□ -0.98
CDH5-208ENST00000614547 LY6LH3BQJ8 138 aa8.93□□□□□ -0.98
CDH5-208ENST00000614547 H3BUX3 64 aa8.93□□□□□ -0.98
CDH5-208ENST00000614547 A8MZ25 164 aa8.92□□□□□ -0.98
CDH5-208ENST00000614547 TNFRSF13BO14836 293 aaPredicted RBP8.92□□□□□ -0.98
CDH5-208ENST00000614547 NPFFO15130 113 aa8.92□□□□□ -0.98
CDH5-208ENST00000614547 LINC01620Q4KN68 170 aa8.92□□□□□ -0.98
CDH5-208ENST00000614547 Q8N1Y9 231 aa8.92□□□□□ -0.98
CDH5-208ENST00000614547 ZFAND3Q9H8U3 227 aa8.92□□□□□ -0.98
CDH5-208ENST00000614547 TSPEAR-AS2P59090 65 aa8.92□□□□□ -0.98
CDH5-208ENST00000614547 MINOS1Q5TGZ0 78 aa8.92□□□□□ -0.98
CDH5-208ENST00000614547 ZNF580Q9UK33 172 aa8.92□□□□□ -0.98
CDH5-208ENST00000614547 MINOS1-NBL1R4GNA1 71 aa8.92□□□□□ -0.98
CDH5-208ENST00000614547 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.91□□□□□ -0.98
CDH5-208ENST00000614547 CCDC179H3BU77 68 aa8.91□□□□□ -0.98
CDH5-208ENST00000614547 TOMM7Q9P0U1 55 aa8.91□□□□□ -0.98
CDH5-208ENST00000614547 PRO0461Q9UI25 63 aa8.91□□□□□ -0.98
CDH5-208ENST00000614547 TEP1Q99973 2627 aaKnown RBP8.91□□□□□ -0.98
CDH5-208ENST00000614547 SYNJ2BPP57105 145 aa8.91□□□□□ -0.98
CDH5-208ENST00000614547 TMEM190Q8WZ59 177 aa8.91□□□□□ -0.98
CDH5-208ENST00000614547 MDFICQ9P1T7 246 aa8.91□□□□□ -0.98
CDH5-208ENST00000614547 NDUFA12Q9UI09 145 aa8.91□□□□□ -0.98
CDH5-208ENST00000614547 HERV-K104P63124 156 aa8.91□□□□□ -0.98
CDH5-208ENST00000614547 C9orf47Q6ZRZ4 202 aa8.91□□□□□ -0.98
CDH5-208ENST00000614547 Q6ZSV7 163 aa8.91□□□□□ -0.98
CDH5-208ENST00000614547 SNRPD3P62318 126 aaKnown RBP8.9□□□□□ -0.98
CDH5-208ENST00000614547 RNASE1P07998 156 aaKnown RBP8.9□□□□□ -0.98
CDH5-208ENST00000614547 P0DMU3 169 aa8.9□□□□□ -0.98
CDH5-208ENST00000614547 FAM231AP0DMU4 169 aa8.9□□□□□ -0.98
CDH5-208ENST00000614547 FAM231CP0DMU5 169 aa8.9□□□□□ -0.98
CDH5-208ENST00000614547 PIFOQ8TCI5 191 aa8.9□□□□□ -0.98
CDH5-208ENST00000614547 CNFNQ9BYD5 112 aa8.9□□□□□ -0.99
CDH5-208ENST00000614547 BLCAPP62952 87 aa8.89□□□□□ -0.99
CDH5-208ENST00000614547 ZFAND2AQ8N6M9 145 aa8.89□□□□□ -0.99
CDH5-208ENST00000614547 MOB4Q9Y3A3 225 aa8.89□□□□□ -0.99
CDH5-208ENST00000614547 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.89□□□□□ -0.99
CDH5-208ENST00000614547 IGKV2-29A2NJV5 120 aaPredicted RBP8.89□□□□□ -0.99
CDH5-208ENST00000614547 CRLF1O75462 422 aa8.89□□□□□ -0.99
CDH5-208ENST00000614547 FHL3Q13643 280 aa8.89□□□□□ -0.99
CDH5-208ENST00000614547 ZNRF2Q8NHG8 242 aa8.89□□□□□ -0.99
CDH5-208ENST00000614547 CLPSL1A2RUU4 121 aa8.88□□□□□ -0.99
CDH5-208ENST00000614547 NDUFV3P56181 108 aaKnown RBP8.88□□□□□ -0.99
CDH5-208ENST00000614547 CIRBPQ14011 172 aaKnown RBP8.88□□□□□ -0.99
CDH5-208ENST00000614547 ATP6V0E2Q8NHE4 81 aa8.88□□□□□ -0.99
CDH5-208ENST00000614547 TMEM141Q96I45 108 aa8.88□□□□□ -0.99
CDH5-208ENST00000614547 TRAV13-1A0A0B4J241 112 aa8.88□□□□□ -0.99
CDH5-208ENST00000614547 CENPVL3A0A0U1RRI6 287 aa8.88□□□□□ -0.99
CDH5-208ENST00000614547 IGHV3-53P01767 116 aa8.88□□□□□ -0.99
CDH5-208ENST00000614547 IGHV3-30P01768 117 aa8.88□□□□□ -0.99
CDH5-208ENST00000614547 PRM2P04554 102 aa8.88□□□□□ -0.99
CDH5-208ENST00000614547 IGHV3-30-5P0DP03 117 aa8.88□□□□□ -0.99
CDH5-208ENST00000614547 UBE2E1P51965 193 aa8.88□□□□□ -0.99
CDH5-208ENST00000614547 SLC25A29Q8N8R3 303 aa8.88□□□□□ -0.99
CDH5-208ENST00000614547 CHCHD5Q9BSY4 110 aa8.88□□□□□ -0.99
CDH5-208ENST00000614547 OOSP1A8MZH6 123 aa8.87□□□□□ -0.99
CDH5-208ENST00000614547 EDN2P20800 178 aa8.87□□□□□ -0.99
CDH5-208ENST00000614547 UBE2D1P51668 147 aa8.87□□□□□ -0.99
CDH5-208ENST00000614547 AJUBAQ96IF1 538 aa8.87□□□□□ -0.99
CDH5-208ENST00000614547 IGHV3-33P01772 117 aa8.86□□□□□ -0.99
CDH5-208ENST00000614547 DAZ1Q9NQZ3 744 aaKnown RBP8.86□□□□□ -0.99
CDH5-208ENST00000614547 OR13C6PQ8NH95 151 aa8.86□□□□□ -0.99
CDH5-208ENST00000614547 RNASE3P12724 160 aaKnown RBP8.86□□□□□ -0.99
CDH5-208ENST00000614547 LY6G5BQ8NDX9 201 aa8.86□□□□□ -0.99
CDH5-208ENST00000614547 TRIAP1O43715 76 aa8.85□□□□□ -0.99
CDH5-208ENST00000614547 UCNP55089 124 aa8.85□□□□□ -0.99
CDH5-208ENST00000614547 SRSF2Q01130 221 aaKnown RBP8.85□□□□□ -0.99
CDH5-208ENST00000614547 HIST2H2BCQ6DN03 193 aa8.85□□□□□ -0.99
CDH5-208ENST00000614547 HOXD3P31249 432 aaPredicted RBP8.85□□□□□ -0.99
CDH5-208ENST00000614547 GAGE2AQ6NT46 116 aa8.85□□□□□ -0.99
CDH5-208ENST00000614547 ITLN2Q8WWU7 325 aaPredicted RBP8.85□□□□□ -0.99
CDH5-208ENST00000614547 LINC01587Q99440 93 aa8.85□□□□□ -0.99
CDH5-208ENST00000614547 GCN1Q92616 2671 aaKnown RBP8.84□□□□□ -0.99
CDH5-208ENST00000614547 ODF3BA8MYP8 253 aa8.84□□□□□ -0.99
CDH5-208ENST00000614547 I3L3M4 83 aa8.84□□□□□ -0.99
CDH5-208ENST00000614547 LEPROTO15243 131 aa8.84□□□□□ -0.99
CDH5-208ENST00000614547 IGHV3-30-3P0DP02 117 aa8.84□□□□□ -0.99
CDH5-208ENST00000614547 PROK1P58294 105 aa8.84□□□□□ -0.99
CDH5-208ENST00000614547 C9orf153Q5TBE3 101 aa8.84□□□□□ -0.99
CDH5-208ENST00000614547 C11orf44Q8N8P7 122 aa8.84□□□□□ -0.99
CDH5-208ENST00000614547 EDA2RQ9HAV5 297 aa8.84□□□□□ -0.99
CDH5-208ENST00000614547 ICOSQ9Y6W8 199 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms