RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 CXCL1P09341 107 aa11.52□□□□□ -0.57
SMN2-213ENST00000614240 LINC00269Q8N2A0 174 aa11.52□□□□□ -0.57
SMN2-213ENST00000614240 DERL1Q9BUN8 251 aa11.52□□□□□ -0.57
SMN2-213ENST00000614240 TRBV25-1A0A075B6N4 114 aa11.51□□□□□ -0.57
SMN2-213ENST00000614240 A0A1B0GV50 99 aa11.51□□□□□ -0.57
SMN2-213ENST00000614240 PFDN1O60925 122 aa11.51□□□□□ -0.57
SMN2-213ENST00000614240 RBX1P62877 108 aa11.51□□□□□ -0.57
SMN2-213ENST00000614240 NTM-AS1Q6ZSK4 140 aa11.51□□□□□ -0.57
SMN2-213ENST00000614240 C9orf163Q8N9P6 203 aa11.51□□□□□ -0.57
SMN2-213ENST00000614240 SFT2D1Q8WV19 159 aa11.51□□□□□ -0.57
SMN2-213ENST00000614240 CYTL1Q9NRR1 136 aa11.51□□□□□ -0.57
SMN2-213ENST00000614240 SCO2A0A1W2PP80 73 aa11.5□□□□□ -0.57
SMN2-213ENST00000614240 SNAI2O43623 268 aa11.5□□□□□ -0.57
SMN2-213ENST00000614240 OR5AL1P0C617 328 aa11.5□□□□□ -0.57
SMN2-213ENST00000614240 DAZAP1Q96EP5 407 aaKnown RBP11.5□□□□□ -0.57
SMN2-213ENST00000614240 SSBP4Q9BWG4 385 aaPredicted RBP11.5□□□□□ -0.57
SMN2-213ENST00000614240 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.5□□□□□ -0.57
SMN2-213ENST00000614240 HNRNPA3P51991 378 aaKnown RBP11.49□□□□□ -0.57
SMN2-213ENST00000614240 FAM213BQ8TBF2 198 aa11.49□□□□□ -0.57
SMN2-213ENST00000614240 DPH3Q96FX2 82 aa11.49□□□□□ -0.57
SMN2-213ENST00000614240 AP1S3Q96PC3 154 aa11.49□□□□□ -0.57
SMN2-213ENST00000614240 PRR34Q9NV39 138 aa11.49□□□□□ -0.57
SMN2-213ENST00000614240 VAX2Q9UIW0 290 aa11.49□□□□□ -0.57
SMN2-213ENST00000614240 CLRN3Q8NCR9 226 aa11.48□□□□□ -0.57
SMN2-213ENST00000614240 IGLV10-54A0A075B6I4 117 aa11.47□□□□□ -0.57
SMN2-213ENST00000614240 IGHV1-24A0A0C4DH33 117 aa11.47□□□□□ -0.57
SMN2-213ENST00000614240 A0A0D9SG52 128 aa11.47□□□□□ -0.57
SMN2-213ENST00000614240 MGPP08493 103 aa11.47□□□□□ -0.57
SMN2-213ENST00000614240 SDIM1Q6ZPB5 146 aa11.47□□□□□ -0.57
SMN2-213ENST00000614240 MLST8Q9BVC4 326 aa11.47□□□□□ -0.57
SMN2-213ENST00000614240 TPPP3Q9BW30 176 aa11.47□□□□□ -0.57
SMN2-213ENST00000614240 hDV102S1A0JD36 115 aa11.46□□□□□ -0.57
SMN2-213ENST00000614240 REG3AQ06141 175 aa11.46□□□□□ -0.57
SMN2-213ENST00000614240 KRTAP26-1Q6PEX3 210 aa11.46□□□□□ -0.57
SMN2-213ENST00000614240 TMUB2Q71RG4 321 aa11.46□□□□□ -0.57
SMN2-213ENST00000614240 MBD3L1Q8WWY6 194 aa11.46□□□□□ -0.57
SMN2-213ENST00000614240 BATF3Q9NR55 127 aa11.46□□□□□ -0.57
SMN2-213ENST00000614240 G3V3Q6 166 aa11.45□□□□□ -0.58
SMN2-213ENST00000614240 H7C1H1 209 aa11.45□□□□□ -0.58
SMN2-213ENST00000614240 PANO1I0J062 215 aa11.45□□□□□ -0.58
SMN2-213ENST00000614240 IQCJQ1A5X6 159 aa11.45□□□□□ -0.58
SMN2-213ENST00000614240 KCNRGQ8N5I3 272 aa11.45□□□□□ -0.58
SMN2-213ENST00000614240 AP5S1Q9NUS5 200 aa11.45□□□□□ -0.58
SMN2-213ENST00000614240 KIF25-AS1Q9Y6Z4 181 aa11.45□□□□□ -0.58
SMN2-213ENST00000614240 DNAH8Q96JB1 4490 aa11.45□□□□□ -0.58
SMN2-213ENST00000614240 UMAD1C9J7I0 102 aa11.44□□□□□ -0.58
SMN2-213ENST00000614240 H2AFB1P0C5Y9 115 aa11.43□□□□□ -0.58
SMN2-213ENST00000614240 RAB5CP51148 216 aa11.43□□□□□ -0.58
SMN2-213ENST00000614240 IGHV3-64A0A075B6Q5 118 aa11.42□□□□□ -0.58
SMN2-213ENST00000614240 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.42□□□□□ -0.58
SMN2-213ENST00000614240 TRAV8-4A0A0B4J246 113 aa11.42□□□□□ -0.58
SMN2-213ENST00000614240 SMLR1H3BR10 107 aa11.42□□□□□ -0.58
SMN2-213ENST00000614240 M0QY20 66 aa11.42□□□□□ -0.58
SMN2-213ENST00000614240 P01737 135 aa11.42□□□□□ -0.58
SMN2-213ENST00000614240 RPL35P42766 123 aaKnown RBP11.42□□□□□ -0.58
SMN2-213ENST00000614240 FER1L6-AS1Q8NA97 138 aa11.42□□□□□ -0.58
SMN2-213ENST00000614240 TMEM243Q9BU79 118 aa11.42□□□□□ -0.58
SMN2-213ENST00000614240 GZMBP10144 247 aa11.41□□□□□ -0.58
SMN2-213ENST00000614240 NKX2-5P52952 324 aaPredicted RBP11.41□□□□□ -0.58
SMN2-213ENST00000614240 RPS20P60866 119 aaKnown RBP11.41□□□□□ -0.58
SMN2-213ENST00000614240 CNBPP62633 177 aaKnown RBP11.41□□□□□ -0.58
SMN2-213ENST00000614240 SUMO4Q6EEV6 95 aa11.41□□□□□ -0.58
SMN2-213ENST00000614240 Q6ZRU5 148 aa11.41□□□□□ -0.58
SMN2-213ENST00000614240 C20orf203Q8NBC4 194 aa11.41□□□□□ -0.58
SMN2-213ENST00000614240 CACNG7P62955 275 aa11.4□□□□□ -0.58
SMN2-213ENST00000614240 OR2D3Q8NGH3 330 aa11.4□□□□□ -0.58
SMN2-213ENST00000614240 A0A1B0GUV1 79 aa11.39□□□□□ -0.59
SMN2-213ENST00000614240 UBE2L6O14933 153 aa11.39□□□□□ -0.59
SMN2-213ENST00000614240 SULT1A2P50226 295 aa11.39□□□□□ -0.59
SMN2-213ENST00000614240 ZNF345Q14585 488 aa11.39□□□□□ -0.59
SMN2-213ENST00000614240 WDR73Q6P4I2 378 aa11.39□□□□□ -0.59
SMN2-213ENST00000614240 IGLV4-60A0A075B6I1 120 aa11.38□□□□□ -0.59
SMN2-213ENST00000614240 KANTRA0A1W2PQU2 76 aa11.38□□□□□ -0.59
SMN2-213ENST00000614240 CIRBPQ14011 172 aaKnown RBP11.38□□□□□ -0.59
SMN2-213ENST00000614240 RASL11AQ6T310 242 aa11.38□□□□□ -0.59
SMN2-213ENST00000614240 GNG13Q9P2W3 67 aa11.38□□□□□ -0.59
SMN2-213ENST00000614240 A0A087WYN8 130 aa11.37□□□□□ -0.59
SMN2-213ENST00000614240 XKRY2A2RUG3 117 aa11.37□□□□□ -0.59
SMN2-213ENST00000614240 IGLC6P0CF74 106 aa11.37□□□□□ -0.59
SMN2-213ENST00000614240 CHTF8P0CG12 524 aa11.37□□□□□ -0.59
SMN2-213ENST00000614240 EIF5AP63241 154 aaKnown RBP11.37□□□□□ -0.59
SMN2-213ENST00000614240 RGS21Q2M5E4 152 aa11.37□□□□□ -0.59
SMN2-213ENST00000614240 CENPWQ5EE01 88 aa11.37□□□□□ -0.59
SMN2-213ENST00000614240 RNF185Q96GF1 192 aa11.37□□□□□ -0.59
SMN2-213ENST00000614240 GFRA4Q9GZZ7 299 aa11.37□□□□□ -0.59
SMN2-213ENST00000614240 DPH3P1Q9H4G8 78 aa11.37□□□□□ -0.59
SMN2-213ENST00000614240 MANBALQ9NQG1 85 aa11.37□□□□□ -0.59
SMN2-213ENST00000614240 LRP1Q07954 4544 aaKnown RBP11.36□□□□□ -0.59
SMN2-213ENST00000614240 F2Z2F3 143 aa11.36□□□□□ -0.59
SMN2-213ENST00000614240 TRGC1P0CF51 173 aa11.36□□□□□ -0.59
SMN2-213ENST00000614240 MT1HL1P0DM35 61 aa11.36□□□□□ -0.59
SMN2-213ENST00000614240 AMTP48728 403 aa11.36□□□□□ -0.59
SMN2-213ENST00000614240 NIT2Q9NQR4 276 aa11.36□□□□□ -0.59
SMN2-213ENST00000614240 BCL2L11O43521 198 aa11.35□□□□□ -0.59
SMN2-213ENST00000614240 IFNA1P01562 189 aa11.35□□□□□ -0.59
SMN2-213ENST00000614240 COTL1Q14019 142 aa11.35□□□□□ -0.59
SMN2-213ENST00000614240 CFAP161Q6P656 301 aa11.35□□□□□ -0.59
SMN2-213ENST00000614240 C7orf33Q8WU49 177 aa11.35□□□□□ -0.59
SMN2-213ENST00000614240 C11orf52Q96A22 123 aa11.35□□□□□ -0.59
SMN2-213ENST00000614240 IGKV3OR2-268A0A0C4DH90 116 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms