RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 UNQ9165/PRO28630Q6UXU0 137 aa8.38□□□□□ -1.07
ATF3-211ENST00000613954 Q6ZUT4 128 aa8.38□□□□□ -1.07
ATF3-211ENST00000613954 WFDC11Q8NEX6 87 aa8.38□□□□□ -1.07
ATF3-211ENST00000613954 GEMIN7Q9H840 131 aaKnown RBP8.38□□□□□ -1.07
ATF3-211ENST00000613954 APCP25054 2843 aa8.38□□□□□ -1.07
ATF3-211ENST00000613954 TRBV6-5A0A0K0K1A5 114 aa8.37□□□□□ -1.07
ATF3-211ENST00000613954 SPRY2O43597 315 aa8.37□□□□□ -1.07
ATF3-211ENST00000613954 CFC1BP0CG36 223 aa8.37□□□□□ -1.07
ATF3-211ENST00000613954 CFC1P0CG37 223 aa8.37□□□□□ -1.07
ATF3-211ENST00000613954 LGALS3P17931 250 aaKnown RBP8.37□□□□□ -1.07
ATF3-211ENST00000613954 RPL11P62913 178 aaKnown RBP8.37□□□□□ -1.07
ATF3-211ENST00000613954 TMEM170BQ5T4T1 132 aa8.37□□□□□ -1.07
ATF3-211ENST00000613954 SUMO4Q6EEV6 95 aa8.37□□□□□ -1.07
ATF3-211ENST00000613954 TRBV27A0A0K0K1C4 114 aa8.37□□□□□ -1.07
ATF3-211ENST00000613954 KLLNB2CW77 178 aa8.37□□□□□ -1.07
ATF3-211ENST00000613954 J3QQQ9 107 aa8.37□□□□□ -1.07
ATF3-211ENST00000613954 ZNF688P0C7X2 276 aa8.37□□□□□ -1.07
ATF3-211ENST00000613954 SCGB1C2P0DMR2 95 aa8.37□□□□□ -1.07
ATF3-211ENST00000613954 BLCAPP62952 87 aa8.37□□□□□ -1.07
ATF3-211ENST00000613954 SPANXA1Q9NS26 97 aa8.37□□□□□ -1.07
ATF3-211ENST00000613954 LINC00527Q9UJ94 153 aa8.37□□□□□ -1.07
ATF3-211ENST00000613954 PRRC2AP48634 2157 aaKnown RBP8.37□□□□□ -1.07
ATF3-211ENST00000613954 SDHAF1A6NFY7 115 aa8.36□□□□□ -1.07
ATF3-211ENST00000613954 LGALS9O00182 355 aa8.36□□□□□ -1.07
ATF3-211ENST00000613954 SFTA2Q6UW10 78 aa8.36□□□□□ -1.07
ATF3-211ENST00000613954 Q6YL49 198 aa8.36□□□□□ -1.07
ATF3-211ENST00000613954 MAP1AP78559 2803 aaPredicted RBP8.36□□□□□ -1.07
ATF3-211ENST00000613954 F5H697 171 aa8.36□□□□□ -1.07
ATF3-211ENST00000613954 ID1P41134 155 aa8.36□□□□□ -1.07
ATF3-211ENST00000613954 RHOHQ15669 191 aa8.36□□□□□ -1.07
ATF3-211ENST00000613954 TEX29Q8N6K0 151 aa8.36□□□□□ -1.07
ATF3-211ENST00000613954 CARD19Q96LW7 228 aa8.36□□□□□ -1.07
ATF3-211ENST00000613954 ZNF580Q9UK33 172 aa8.36□□□□□ -1.07
ATF3-211ENST00000613954 F6UB75 175 aa8.35□□□□□ -1.07
ATF3-211ENST00000613954 LEPROTO15243 131 aa8.35□□□□□ -1.07
ATF3-211ENST00000613954 MT-ATP8P03928 68 aa8.35□□□□□ -1.07
ATF3-211ENST00000613954 EMP1P54849 157 aa8.35□□□□□ -1.07
ATF3-211ENST00000613954 XGP55808 180 aa8.35□□□□□ -1.07
ATF3-211ENST00000613954 RPL39P62891 51 aaKnown RBP8.35□□□□□ -1.07
ATF3-211ENST00000613954 Q6ZS46 218 aa8.35□□□□□ -1.07
ATF3-211ENST00000613954 ZNRF2Q8NHG8 242 aa8.35□□□□□ -1.07
ATF3-211ENST00000613954 PTH2Q96A98 100 aa8.35□□□□□ -1.07
ATF3-211ENST00000613954 VPREB3Q9UKI3 123 aa8.35□□□□□ -1.07
ATF3-211ENST00000613954 A0A0B4J2C4 111 aa8.34□□□□□ -1.07
ATF3-211ENST00000613954 TRBV12-3P01733 135 aa8.34□□□□□ -1.07
ATF3-211ENST00000613954 TSPEAR-AS2P59090 65 aa8.34□□□□□ -1.07
ATF3-211ENST00000613954 NSUN5P1Q3KNT7 163 aa8.34□□□□□ -1.07
ATF3-211ENST00000613954 AMELXQ99217 191 aa8.34□□□□□ -1.07
ATF3-211ENST00000613954 RHPN1-AS1Q9BWJ2 59 aa8.34□□□□□ -1.07
ATF3-211ENST00000613954 CSMD2Q7Z408 3487 aa8.34□□□□□ -1.07
ATF3-211ENST00000613954 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.34□□□□□ -1.07
ATF3-211ENST00000613954 DEFB1P60022 68 aa8.34□□□□□ -1.07
ATF3-211ENST00000613954 FHL3Q13643 280 aa8.34□□□□□ -1.07
ATF3-211ENST00000613954 DAZ1Q9NQZ3 744 aaKnown RBP8.34□□□□□ -1.07
ATF3-211ENST00000613954 HELZ2Q9BYK8 2649 aaKnown RBP8.33□□□□□ -1.08
ATF3-211ENST00000613954 SLC25A20O43772 301 aa8.33□□□□□ -1.08
ATF3-211ENST00000613954 IGLV1-40P01703 118 aa8.33□□□□□ -1.08
ATF3-211ENST00000613954 P0DMU3 169 aa8.33□□□□□ -1.08
ATF3-211ENST00000613954 FAM231AP0DMU4 169 aa8.33□□□□□ -1.08
ATF3-211ENST00000613954 FAM231CP0DMU5 169 aa8.33□□□□□ -1.08
ATF3-211ENST00000613954 ANKRD29Q8N6D5 301 aa8.33□□□□□ -1.08
ATF3-211ENST00000613954 ODF3Q96PU9 254 aa8.33□□□□□ -1.08
ATF3-211ENST00000613954 SPXQ9BT56 116 aa8.33□□□□□ -1.08
ATF3-211ENST00000613954 MUC4Q99102 2169 aa8.33□□□□□ -1.08
ATF3-211ENST00000613954 A0A087WWL8 130 aa8.32□□□□□ -1.08
ATF3-211ENST00000613954 A0A0J9YX75 114 aa8.32□□□□□ -1.08
ATF3-211ENST00000613954 TMEM223A0PJW6 202 aa8.32□□□□□ -1.08
ATF3-211ENST00000613954 CFHR3Q02985 330 aa8.32□□□□□ -1.08
ATF3-211ENST00000613954 TRPT1Q86TN4 253 aaKnown RBP8.32□□□□□ -1.08
ATF3-211ENST00000613954 ERG28Q9UKR5 140 aa8.32□□□□□ -1.08
ATF3-211ENST00000613954 A4D1N5 150 aa8.32□□□□□ -1.08
ATF3-211ENST00000613954 K7EMT4 169 aa8.32□□□□□ -1.08
ATF3-211ENST00000613954 PF4V1P10720 104 aa8.32□□□□□ -1.08
ATF3-211ENST00000613954 RAX2Q96IS3 184 aa8.32□□□□□ -1.08
ATF3-211ENST00000613954 C9orf85Q96MD7 179 aa8.32□□□□□ -1.08
ATF3-211ENST00000613954 MDFICQ9P1T7 246 aa8.32□□□□□ -1.08
ATF3-211ENST00000613954 CELSR1Q9NYQ6 3014 aa8.31□□□□□ -1.08
ATF3-211ENST00000613954 IGHV3-33P01772 117 aa8.31□□□□□ -1.08
ATF3-211ENST00000613954 TMEM263Q8WUH6 116 aaKnown RBP8.31□□□□□ -1.08
ATF3-211ENST00000613954 JPT2Q9H910 190 aa8.31□□□□□ -1.08
ATF3-211ENST00000613954 CREBBPQ92793 2442 aa8.31□□□□□ -1.08
ATF3-211ENST00000613954 IGKV3-7A0A075B6H7 116 aa8.3□□□□□ -1.08
ATF3-211ENST00000613954 IGHV3-11P01762 117 aa8.3□□□□□ -1.08
ATF3-211ENST00000613954 ATXN8Q156A1 80 aa8.3□□□□□ -1.08
ATF3-211ENST00000613954 ZNF56Q15929 161 aa8.3□□□□□ -1.08
ATF3-211ENST00000613954 ZFAND6Q6FIF0 208 aa8.3□□□□□ -1.08
ATF3-211ENST00000613954 LINC01600Q96MT4 127 aa8.3□□□□□ -1.08
ATF3-211ENST00000613954 ZNF256Q9Y2P7 627 aaPredicted RBP8.3□□□□□ -1.08
ATF3-211ENST00000613954 CSPG4Q6UVK1 2322 aa8.3□□□□□ -1.08
ATF3-211ENST00000613954 SVEP1Q4LDE5 3571 aa8.3□□□□□ -1.08
ATF3-211ENST00000613954 TMEM89A2RUT3 159 aa8.3□□□□□ -1.08
ATF3-211ENST00000613954 C9JAW5 83 aa8.3□□□□□ -1.08
ATF3-211ENST00000613954 M0QY20 66 aa8.3□□□□□ -1.08
ATF3-211ENST00000613954 RHODO00212 210 aa8.3□□□□□ -1.08
ATF3-211ENST00000613954 FAM74A4Q5TZK3 123 aa8.3□□□□□ -1.08
ATF3-211ENST00000613954 SHISA2Q6UWI4 295 aa8.3□□□□□ -1.08
ATF3-211ENST00000613954 PDZD2O15018 2839 aa8.29□□□□□ -1.08
ATF3-211ENST00000613954 ZANQ9Y493 2812 aa8.29□□□□□ -1.08
ATF3-211ENST00000613954 TRAV2A0A0B4J234 112 aa8.29□□□□□ -1.08
ATF3-211ENST00000613954 TRAV12-3A0A0B4J271 114 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms