RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 CTXND1A0A1B0GTU2 59 aa14.78□□□□□ -0.04
MMP28-203ENST00000612672 hDV102S1A0JD36 115 aa14.78□□□□□ -0.04
MMP28-203ENST00000612672 LTAP01374 205 aa14.78□□□□□ -0.04
MMP28-203ENST00000612672 Q5BKY6 102 aa14.78□□□□□ -0.04
MMP28-203ENST00000612672 GFRA4Q9GZZ7 299 aa14.78□□□□□ -0.04
MMP28-203ENST00000612672 RPL7L1Q6DKI1 246 aaKnown RBP14.77□□□□□ -0.05
MMP28-203ENST00000612672 FMC1Q96HJ9 113 aa14.77□□□□□ -0.05
MMP28-203ENST00000612672 TRBV6-1A0A0K0K1D8 114 aa14.76□□□□□ -0.05
MMP28-203ENST00000612672 C20orf203Q8NBC4 194 aa14.76□□□□□ -0.05
MMP28-203ENST00000612672 CLRN3Q8NCR9 226 aa14.76□□□□□ -0.05
MMP28-203ENST00000612672 DERL1Q9BUN8 251 aa14.76□□□□□ -0.05
MMP28-203ENST00000612672 IGHV3-64A0A075B6Q5 118 aa14.75□□□□□ -0.05
MMP28-203ENST00000612672 PKIAP61925 76 aa14.75□□□□□ -0.05
MMP28-203ENST00000612672 UBE2G1P62253 170 aa14.75□□□□□ -0.05
MMP28-203ENST00000612672 REG3AQ06141 175 aa14.75□□□□□ -0.05
MMP28-203ENST00000612672 LINC01600Q96MT4 127 aa14.75□□□□□ -0.05
MMP28-203ENST00000612672 PLAC8Q9NZF1 115 aa14.75□□□□□ -0.05
MMP28-203ENST00000612672 KIF25-AS1Q9Y6Z4 181 aa14.75□□□□□ -0.05
MMP28-203ENST00000612672 RNF185Q96GF1 192 aa14.74□□□□□ -0.05
MMP28-203ENST00000612672 ALG5Q9Y673 324 aa14.74□□□□□ -0.05
MMP28-203ENST00000612672 IGLV4-60A0A075B6I1 120 aa14.72□□□□□ -0.05
MMP28-203ENST00000612672 SNAI2O43623 268 aa14.72□□□□□ -0.05
MMP28-203ENST00000612672 IQCJQ1A5X6 159 aa14.72□□□□□ -0.05
MMP28-203ENST00000612672 NKX6-2Q9C056 277 aaPredicted RBP14.72□□□□□ -0.05
MMP28-203ENST00000612672 TRBV25-1A0A075B6N4 114 aa14.71□□□□□ -0.05
MMP28-203ENST00000612672 RAB5CP51148 216 aa14.71□□□□□ -0.05
MMP28-203ENST00000612672 DEFA1P59665 94 aa14.71□□□□□ -0.05
MMP28-203ENST00000612672 SSTP61278 116 aa14.71□□□□□ -0.05
MMP28-203ENST00000612672 DPH3Q96FX2 82 aa14.71□□□□□ -0.05
MMP28-203ENST00000612672 SSBP4Q9BWG4 385 aaPredicted RBP14.71□□□□□ -0.05
MMP28-203ENST00000612672 ZNF471Q9BX82 626 aaPredicted RBP14.71□□□□□ -0.05
MMP28-203ENST00000612672 F5H697 171 aa14.7□□□□□ -0.06
MMP28-203ENST00000612672 INO80EQ8NBZ0 244 aaPredicted RBP14.7□□□□□ -0.06
MMP28-203ENST00000612672 PRR3P79522 188 aaKnown RBP14.69□□□□□ -0.06
MMP28-203ENST00000612672 TMEM97Q5BJF2 176 aa14.69□□□□□ -0.06
MMP28-203ENST00000612672 C15orf56Q8N910 161 aa14.69□□□□□ -0.06
MMP28-203ENST00000612672 MAP1LC3B2A6NCE7 125 aa14.68□□□□□ -0.06
MMP28-203ENST00000612672 CXCL1P09341 107 aa14.68□□□□□ -0.06
MMP28-203ENST00000612672 AKR1C3P42330 323 aa14.68□□□□□ -0.06
MMP28-203ENST00000612672 MAP1LC3BQ9GZQ8 125 aa14.68□□□□□ -0.06
MMP28-203ENST00000612672 IGHV1-24A0A0C4DH33 117 aa14.67□□□□□ -0.06
MMP28-203ENST00000612672 OR5AL1P0C617 328 aa14.67□□□□□ -0.06
MMP28-203ENST00000612672 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.67□□□□□ -0.06
MMP28-203ENST00000612672 KRTAP10-8P60410 259 aa14.66□□□□□ -0.06
MMP28-203ENST00000612672 COX6A2Q02221 97 aa14.66□□□□□ -0.06
MMP28-203ENST00000612672 SPANXN1Q5VSR9 72 aa14.66□□□□□ -0.06
MMP28-203ENST00000612672 CST9LP1Q5W188 147 aa14.66□□□□□ -0.06
MMP28-203ENST00000612672 MLST8Q9BVC4 326 aa14.66□□□□□ -0.06
MMP28-203ENST00000612672 AP5S1Q9NUS5 200 aa14.66□□□□□ -0.06
MMP28-203ENST00000612672 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.65□□□□□ -0.06
MMP28-203ENST00000612672 A0A0J9YXV3 536 aa14.65□□□□□ -0.06
MMP28-203ENST00000612672 PRSS3P2Q8NHM4 247 aa14.65□□□□□ -0.06
MMP28-203ENST00000612672 C7orf33Q8WU49 177 aa14.65□□□□□ -0.06
MMP28-203ENST00000612672 DPH3P1Q9H4G8 78 aa14.65□□□□□ -0.06
MMP28-203ENST00000612672 TRAV8-4A0A0B4J246 113 aa14.64□□□□□ -0.07
MMP28-203ENST00000612672 M0QY20 66 aa14.64□□□□□ -0.07
MMP28-203ENST00000612672 P01737 135 aa14.64□□□□□ -0.07
MMP28-203ENST00000612672 FHITP49789 147 aa14.64□□□□□ -0.07
MMP28-203ENST00000612672 WDR73Q6P4I2 378 aa14.64□□□□□ -0.07
MMP28-203ENST00000612672 AKR1C8PQ5T2L2 129 aa14.63□□□□□ -0.07
MMP28-203ENST00000612672 GTSF1Q8WW33 167 aa14.63□□□□□ -0.07
MMP28-203ENST00000612672 IGKV2-24A0A0C4DH68 120 aa14.62□□□□□ -0.07
MMP28-203ENST00000612672 SCO2A0A1W2PP80 73 aa14.62□□□□□ -0.07
MMP28-203ENST00000612672 GAS8-AS1O95177 125 aa14.62□□□□□ -0.07
MMP28-203ENST00000612672 MAJINQ3KP22 176 aa14.62□□□□□ -0.07
MMP28-203ENST00000612672 SUMO4Q6EEV6 95 aa14.62□□□□□ -0.07
MMP28-203ENST00000612672 BORCS7-ASMTA0A0B4J1R7 106 aa14.61□□□□□ -0.07
MMP28-203ENST00000612672 A0A1B0GUV1 79 aa14.61□□□□□ -0.07
MMP28-203ENST00000612672 PAGE4O60829 102 aa14.61□□□□□ -0.07
MMP28-203ENST00000612672 HIGD2BQ4VC39 106 aa14.61□□□□□ -0.07
MMP28-203ENST00000612672 LYPD6BQ8NI32 183 aa14.61□□□□□ -0.07
MMP28-203ENST00000612672 STOML3Q8TAV4 291 aa14.61□□□□□ -0.07
MMP28-203ENST00000612672 AP1S3Q96PC3 154 aa14.61□□□□□ -0.07
MMP28-203ENST00000612672 TCEAL7Q9BRU2 100 aa14.61□□□□□ -0.07
MMP28-203ENST00000612672 MGPP08493 103 aa14.6□□□□□ -0.07
MMP28-203ENST00000612672 NKX2-5P52952 324 aaPredicted RBP14.6□□□□□ -0.07
MMP28-203ENST00000612672 TMEM243Q9BU79 118 aa14.6□□□□□ -0.07
MMP28-203ENST00000612672 FXYD6-FXYD2A0A087WZ82 144 aa14.59□□□□□ -0.07
MMP28-203ENST00000612672 GAGE12HA6NDE8 117 aa14.59□□□□□ -0.07
MMP28-203ENST00000612672 GZMBP10144 247 aa14.59□□□□□ -0.07
MMP28-203ENST00000612672 STPG4Q8N801 248 aa14.59□□□□□ -0.07
MMP28-203ENST00000612672 CYTL1Q9NRR1 136 aa14.59□□□□□ -0.07
MMP28-203ENST00000612672 A0A096LNI7 61 aa14.58□□□□□ -0.08
MMP28-203ENST00000612672 NDUFS6O75380 124 aaKnown RBP14.58□□□□□ -0.08
MMP28-203ENST00000612672 SMIM17P0DL12 118 aa14.58□□□□□ -0.08
MMP28-203ENST00000612672 G3V3Q6 166 aa14.57□□□□□ -0.08
MMP28-203ENST00000612672 RPS10P46783 165 aaKnown RBP14.57□□□□□ -0.08
MMP28-203ENST00000612672 BAGE2Q86Y30 109 aa14.57□□□□□ -0.08
MMP28-203ENST00000612672 MED28Q9H204 178 aa14.57□□□□□ -0.08
MMP28-203ENST00000612672 GIPP09681 153 aaPredicted RBP14.56□□□□□ -0.08
MMP28-203ENST00000612672 A0A1B0GV50 99 aa14.55□□□□□ -0.08
MMP28-203ENST00000612672 IGLC6P0CF74 106 aa14.54□□□□□ -0.08
MMP28-203ENST00000612672 IGKV3OR2-268A0A0C4DH90 116 aa14.53□□□□□ -0.08
MMP28-203ENST00000612672 SRSF9Q13242 221 aaKnown RBP eCLIP14.53□□□□□ -0.08
MMP28-203ENST00000612672 MUC2Q02817 5179 aa14.52□□□□□ -0.08
MMP28-203ENST00000612672 SULT1A2P50226 295 aa14.52□□□□□ -0.09
MMP28-203ENST00000612672 SPINK6Q6UWN8 80 aa14.52□□□□□ -0.09
MMP28-203ENST00000612672 PGLYRP4Q96LB8 373 aa14.52□□□□□ -0.09
MMP28-203ENST00000612672 TPPP3Q9BW30 176 aa14.52□□□□□ -0.09
MMP28-203ENST00000612672 S100A9P06702 114 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms