RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 Q8N8P6 123 aa6.37□□□□□ -1.39
SMAD4-217ENST00000611848 IL17DQ8TAD2 202 aa6.37□□□□□ -1.39
SMAD4-217ENST00000611848 MRAP2Q96G30 205 aa6.37□□□□□ -1.39
SMAD4-217ENST00000611848 MRPS16Q9Y3D3 137 aaKnown RBP6.37□□□□□ -1.39
SMAD4-217ENST00000611848 GOLT1BQ9Y3E0 138 aa6.37□□□□□ -1.39
SMAD4-217ENST00000611848 SMIM9A6NGZ8 99 aa6.36□□□□□ -1.39
SMAD4-217ENST00000611848 C3orf84H3BNL1 204 aa6.36□□□□□ -1.39
SMAD4-217ENST00000611848 RNASE3P12724 160 aaKnown RBP6.36□□□□□ -1.39
SMAD4-217ENST00000611848 GATA1P15976 413 aaPredicted RBP6.36□□□□□ -1.39
SMAD4-217ENST00000611848 LEPP41159 167 aa6.36□□□□□ -1.39
SMAD4-217ENST00000611848 LGALS9BQ3B8N2 356 aa6.36□□□□□ -1.39
SMAD4-217ENST00000611848 LGALS9CQ6DKI2 356 aa6.36□□□□□ -1.39
SMAD4-217ENST00000611848 Q6ZN92 141 aa6.36□□□□□ -1.39
SMAD4-217ENST00000611848 POM121L12Q8N7R1 296 aa6.36□□□□□ -1.39
SMAD4-217ENST00000611848 MUC7Q8TAX7 377 aa6.36□□□□□ -1.39
SMAD4-217ENST00000611848 C11orf68Q9H3H3 251 aaKnown RBP6.36□□□□□ -1.39
SMAD4-217ENST00000611848 X6R8D5 127 aa6.36□□□□□ -1.39
SMAD4-217ENST00000611848 hDV102S1A0JD36 115 aa6.36□□□□□ -1.39
SMAD4-217ENST00000611848 GNRH2O43555 120 aa6.36□□□□□ -1.39
SMAD4-217ENST00000611848 INSP01308 110 aa6.36□□□□□ -1.39
SMAD4-217ENST00000611848 S100A4P26447 101 aaKnown RBP6.36□□□□□ -1.39
SMAD4-217ENST00000611848 FCER1GP30273 86 aa6.36□□□□□ -1.39
SMAD4-217ENST00000611848 HNRNPA3P51991 378 aaKnown RBP6.36□□□□□ -1.39
SMAD4-217ENST00000611848 C1orf158Q8N1D5 194 aa6.36□□□□□ -1.39
SMAD4-217ENST00000611848 Q8NAQ8 132 aa6.36□□□□□ -1.39
SMAD4-217ENST00000611848 IGHV3OR16-12A0A075B7B8 117 aa6.35□□□□□ -1.39
SMAD4-217ENST00000611848 C7orf71A4D174 169 aa6.35□□□□□ -1.39
SMAD4-217ENST00000611848 HSBP1L1C9JCN9 74 aa6.35□□□□□ -1.39
SMAD4-217ENST00000611848 IFI27L1Q96BM0 104 aa6.35□□□□□ -1.39
SMAD4-217ENST00000611848 TMEM208Q9BTX3 173 aa6.35□□□□□ -1.39
SMAD4-217ENST00000611848 DPH3P1Q9H4G8 78 aa6.35□□□□□ -1.39
SMAD4-217ENST00000611848 PHLDA3Q9Y5J5 127 aa6.35□□□□□ -1.39
SMAD4-217ENST00000611848 TIMM8BQ9Y5J9 83 aaPredicted RBP6.35□□□□□ -1.39
SMAD4-217ENST00000611848 TRAV12-2A0A075B6T6 113 aa6.34□□□□□ -1.39
SMAD4-217ENST00000611848 IGHV4-28A0A0C4DH34 117 aa6.34□□□□□ -1.39
SMAD4-217ENST00000611848 M0R381 172 aa6.34□□□□□ -1.39
SMAD4-217ENST00000611848 FAM159AQ6UWV7 190 aa6.34□□□□□ -1.39
SMAD4-217ENST00000611848 TRAV26-2A0A0B4J265 109 aa6.33□□□□□ -1.4
SMAD4-217ENST00000611848 H0Y8G0 127 aa6.33□□□□□ -1.4
SMAD4-217ENST00000611848 RBMY1A1P0DJD3 496 aaKnown RBP6.33□□□□□ -1.4
SMAD4-217ENST00000611848 RBMY1CP0DJD4 496 aa6.33□□□□□ -1.4
SMAD4-217ENST00000611848 RBMY1FQ15415 496 aaKnown RBP6.33□□□□□ -1.4
SMAD4-217ENST00000611848 RRN3P1Q2M238 152 aa6.33□□□□□ -1.4
SMAD4-217ENST00000611848 LCE2CQ5TA81 110 aa6.33□□□□□ -1.4
SMAD4-217ENST00000611848 RASL10AQ92737 203 aa6.33□□□□□ -1.4
SMAD4-217ENST00000611848 AP1S3Q96PC3 154 aa6.33□□□□□ -1.4
SMAD4-217ENST00000611848 LINC01587Q99440 93 aa6.33□□□□□ -1.4
SMAD4-217ENST00000611848 C20orf78Q9BR46 151 aa6.33□□□□□ -1.4
SMAD4-217ENST00000611848 KIF25-AS1Q9Y6Z4 181 aa6.33□□□□□ -1.4
SMAD4-217ENST00000611848 CSMD3Q7Z407 3707 aa6.33□□□□□ -1.4
SMAD4-217ENST00000611848 TRAV12-3A0A0B4J271 114 aa6.32□□□□□ -1.4
SMAD4-217ENST00000611848 DEFB4AO15263 64 aa6.32□□□□□ -1.4
SMAD4-217ENST00000611848 LINC00315P59091 139 aa6.32□□□□□ -1.4
SMAD4-217ENST00000611848 LAGE3Q14657 143 aa6.32□□□□□ -1.4
SMAD4-217ENST00000611848 SLC25A34Q6PIV7 304 aa6.32□□□□□ -1.4
SMAD4-217ENST00000611848 C14orf178Q8N769 122 aaPredicted RBP6.32□□□□□ -1.4
SMAD4-217ENST00000611848 C11orf45Q8TAV5 145 aa6.32□□□□□ -1.4
SMAD4-217ENST00000611848 C9orf85Q96MD7 179 aa6.32□□□□□ -1.4
SMAD4-217ENST00000611848 PMCHL2Q9BQD1 86 aa6.32□□□□□ -1.4
SMAD4-217ENST00000611848 SMIM2Q9BVW6 85 aa6.32□□□□□ -1.4
SMAD4-217ENST00000611848 IGHV3-16A0A0C4DH30 117 aa6.32□□□□□ -1.4
SMAD4-217ENST00000611848 K7EMI3 77 aa6.32□□□□□ -1.4
SMAD4-217ENST00000611848 PPP1R17O96001 155 aa6.32□□□□□ -1.4
SMAD4-217ENST00000611848 COL5A1-AS1Q5SY13 56 aa6.32□□□□□ -1.4
SMAD4-217ENST00000611848 CASC10Q5T4H9 136 aa6.32□□□□□ -1.4
SMAD4-217ENST00000611848 LINC00469Q8N7U9 141 aa6.32□□□□□ -1.4
SMAD4-217ENST00000611848 IGHV1OR15-1A0A075B7D0 117 aa6.31□□□□□ -1.4
SMAD4-217ENST00000611848 TEX48A0A1B0GUV7 120 aa6.31□□□□□ -1.4
SMAD4-217ENST00000611848 ATP5LO75964 103 aa6.31□□□□□ -1.4
SMAD4-217ENST00000611848 SMIM17P0DL12 118 aa6.31□□□□□ -1.4
SMAD4-217ENST00000611848 COX8AP10176 69 aa6.31□□□□□ -1.4
SMAD4-217ENST00000611848 SUMO2P61956 95 aaKnown RBP6.31□□□□□ -1.4
SMAD4-217ENST00000611848 RPL32P62910 135 aaKnown RBP6.31□□□□□ -1.4
SMAD4-217ENST00000611848 STARD9Q9P2P6 4700 aa6.31□□□□□ -1.4
SMAD4-217ENST00000611848 TCAPO15273 167 aa6.3□□□□□ -1.4
SMAD4-217ENST00000611848 SPART-AS1P0CW21 52 aa6.3□□□□□ -1.4
SMAD4-217ENST00000611848 ODF1Q14990 250 aa6.3□□□□□ -1.4
SMAD4-217ENST00000611848 BATFQ16520 125 aa6.3□□□□□ -1.4
SMAD4-217ENST00000611848 ZFAND6Q6FIF0 208 aa6.3□□□□□ -1.4
SMAD4-217ENST00000611848 STPG4Q8N801 248 aa6.3□□□□□ -1.4
SMAD4-217ENST00000611848 C16orf74Q96GX8 76 aa6.3□□□□□ -1.4
SMAD4-217ENST00000611848 C18orf15Q96N68 181 aa6.3□□□□□ -1.4
SMAD4-217ENST00000611848 NUPR2A6NF83 97 aa6.29□□□□□ -1.4
SMAD4-217ENST00000611848 FGF6P10767 208 aa6.29□□□□□ -1.4
SMAD4-217ENST00000611848 HTN1P15515 57 aa6.29□□□□□ -1.4
SMAD4-217ENST00000611848 EMP1P54849 157 aa6.29□□□□□ -1.4
SMAD4-217ENST00000611848 NANOS2P60321 138 aaKnown RBP6.29□□□□□ -1.4
SMAD4-217ENST00000611848 ORMDL2Q53FV1 153 aa6.29□□□□□ -1.4
SMAD4-217ENST00000611848 TMEM263Q8WUH6 116 aaKnown RBP6.29□□□□□ -1.4
SMAD4-217ENST00000611848 RPL39LQ96EH5 51 aaKnown RBP6.29□□□□□ -1.4
SMAD4-217ENST00000611848 LINC00467Q9BRT7 94 aa6.29□□□□□ -1.4
SMAD4-217ENST00000611848 MDFICQ9P1T7 246 aa6.29□□□□□ -1.4
SMAD4-217ENST00000611848 DKK2Q9UBU2 259 aa6.29□□□□□ -1.4
SMAD4-217ENST00000611848 DYNC2H1Q8NCM8 4307 aaKnown RBP6.29□□□□□ -1.4
SMAD4-217ENST00000611848 PLECQ15149 4684 aaKnown RBP6.29□□□□□ -1.4
SMAD4-217ENST00000611848 DLEU1O43261 78 aa6.28□□□□□ -1.4
SMAD4-217ENST00000611848 PRM2P04554 102 aa6.28□□□□□ -1.4
SMAD4-217ENST00000611848 MGPP08493 103 aa6.28□□□□□ -1.4
SMAD4-217ENST00000611848 AZU1P20160 251 aa6.28□□□□□ -1.4
SMAD4-217ENST00000611848 HINT1P49773 126 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms