RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.77□□□□□ -1.65
SNX13-213ENST00000611725 A0A0U1RRA0 63 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 E9PLD3 99 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 ADAMTSL5Q6ZMM2 481 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 C1QTNF4Q9BXJ3 329 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 IGHV3-16A0A0C4DH30 117 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 KLK9Q2XQG4 91 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 DLX4Q92988 240 aaPredicted RBP4.77□□□□□ -1.65
SNX13-213ENST00000611725 ODF3Q96PU9 254 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 PSMG3-AS1Q96PY0 264 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 ERG28Q9UKR5 140 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 DCANP1Q8TF63 244 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 F8P00451 2351 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 H3BMG7 143 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 LGALS9O00182 355 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 UBE2L6O14933 153 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 UFSP1Q6NVU6 142 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 NEXN-AS1Q8NBZ9 246 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 NDUFA12Q9UI09 145 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 TRAV13-1A0A0B4J241 112 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 TRGV4A0A0C4DH28 118 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 H3BMM0 161 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 SOCS3O14543 225 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 POLR2KP53803 58 aaKnown RBP4.77□□□□□ -1.65
SNX13-213ENST00000611725 APRG1Q8IVJ8 170 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 BAALCQ8WXS3 180 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 TM2D2Q9BX73 214 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 RPL13AP40429 203 aaKnown RBP4.77□□□□□ -1.65
SNX13-213ENST00000611725 MTURNQ8N3F0 131 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 ZNRF2Q8NHG8 242 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 TMEM101Q96IK0 257 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 CHCHD5Q9BSY4 110 aa4.77□□□□□ -1.65
SNX13-213ENST00000611725 DSCAML1Q8TD84 2053 aa4.76□□□□□ -1.65
SNX13-213ENST00000611725 IGHV3-38A0A0C4DH36 116 aa4.76□□□□□ -1.65
SNX13-213ENST00000611725 M0R2P5 195 aa4.76□□□□□ -1.65
SNX13-213ENST00000611725 Q6YL49 198 aa4.76□□□□□ -1.65
SNX13-213ENST00000611725 TOMM7Q9P0U1 55 aa4.76□□□□□ -1.65
SNX13-213ENST00000611725 ZNF580Q9UK33 172 aa4.76□□□□□ -1.65
SNX13-213ENST00000611725 TNRC6BQ9UPQ9 1833 aaKnown RBP4.76□□□□□ -1.65
SNX13-213ENST00000611725 KALRNO60229 2985 aa4.76□□□□□ -1.65
SNX13-213ENST00000611725 DMXL2Q8TDJ6 3036 aa4.76□□□□□ -1.65
SNX13-213ENST00000611725 TRBV27A0A0K0K1C4 114 aa4.76□□□□□ -1.65
SNX13-213ENST00000611725 RPL32P62910 135 aaKnown RBP4.76□□□□□ -1.65
SNX13-213ENST00000611725 RNF152Q8N8N0 203 aa4.76□□□□□ -1.65
SNX13-213ENST00000611725 WFDC11Q8NEX6 87 aa4.76□□□□□ -1.65
SNX13-213ENST00000611725 EYSQ5T1H1 3165 aa4.75□□□□□ -1.65
SNX13-213ENST00000611725 RIPPLY3P57055 190 aa4.75□□□□□ -1.65
SNX13-213ENST00000611725 OPRPNQ99935 248 aaPredicted RBP4.75□□□□□ -1.65
SNX13-213ENST00000611725 GAGE12JA6NER3 117 aa4.75□□□□□ -1.65
SNX13-213ENST00000611725 GAGE4Q13068 117 aa4.75□□□□□ -1.65
SNX13-213ENST00000611725 GAGE5Q13069 117 aa4.75□□□□□ -1.65
SNX13-213ENST00000611725 COPS9Q8WXC6 57 aa4.75□□□□□ -1.65
SNX13-213ENST00000611725 ADARB2-AS1A8MUL3 147 aa4.75□□□□□ -1.65
SNX13-213ENST00000611725 M0QY20 66 aa4.75□□□□□ -1.65
SNX13-213ENST00000611725 PRO1854Q9UHT4 67 aa4.75□□□□□ -1.65
SNX13-213ENST00000611725 ITPR1Q14643 2758 aa4.75□□□□□ -1.65
SNX13-213ENST00000611725 COL12A1Q99715 3063 aa4.75□□□□□ -1.65
SNX13-213ENST00000611725 IGHV4-31P0DP07 118 aa4.75□□□□□ -1.65
SNX13-213ENST00000611725 NSUN5P1Q3KNT7 163 aa4.75□□□□□ -1.65
SNX13-213ENST00000611725 MAPKAPK5-AS1Q8N8E1 139 aa4.75□□□□□ -1.65
SNX13-213ENST00000611725 TRBV6-5A0A0K0K1A5 114 aa4.75□□□□□ -1.65
SNX13-213ENST00000611725 CRYGDP07320 174 aa4.75□□□□□ -1.65
SNX13-213ENST00000611725 KRTAP10-9P60411 292 aa4.75□□□□□ -1.65
SNX13-213ENST00000611725 MORN3Q6PF18 240 aaPredicted RBP4.75□□□□□ -1.65
SNX13-213ENST00000611725 ZNF625Q96I27 306 aaPredicted RBP4.75□□□□□ -1.65
SNX13-213ENST00000611725 TEX48A0A1B0GUV7 120 aa4.75□□□□□ -1.65
SNX13-213ENST00000611725 DEFB130BP0DP73 79 aa4.75□□□□□ -1.65
SNX13-213ENST00000611725 DEFB130AP0DP74 79 aa4.75□□□□□ -1.65
SNX13-213ENST00000611725 RPL35AP18077 110 aaKnown RBP4.75□□□□□ -1.65
SNX13-213ENST00000611725 EDN2P20800 178 aa4.75□□□□□ -1.65
SNX13-213ENST00000611725 RNASE13Q5GAN3 156 aaKnown RBP4.75□□□□□ -1.65
SNX13-213ENST00000611725 PRIMA1Q86XR5 153 aa4.75□□□□□ -1.65
SNX13-213ENST00000611725 LRRC75A-AS1Q8N1F1 130 aa4.75□□□□□ -1.65
SNX13-213ENST00000611725 IGLV2-18A0A075B6J9 118 aa4.74□□□□□ -1.65
SNX13-213ENST00000611725 F8W1H4 67 aa4.74□□□□□ -1.65
SNX13-213ENST00000611725 TMEM86BQ8N661 226 aa4.74□□□□□ -1.65
SNX13-213ENST00000611725 AZU1P20160 251 aa4.74□□□□□ -1.65
SNX13-213ENST00000611725 ZNF702PQ9H963 129 aa4.74□□□□□ -1.65
SNX13-213ENST00000611725 SPANXA1Q9NS26 97 aa4.74□□□□□ -1.65
SNX13-213ENST00000611725 AGRNO00468 2067 aa4.74□□□□□ -1.65
SNX13-213ENST00000611725 TRBV20-1A0A075B6N2 111 aa4.74□□□□□ -1.65
SNX13-213ENST00000611725 J3QKU1 62 aa4.74□□□□□ -1.65
SNX13-213ENST00000611725 CCL24O00175 119 aa4.74□□□□□ -1.65
SNX13-213ENST00000611725 C10orf126Q8N4M7 172 aa4.74□□□□□ -1.65
SNX13-213ENST00000611725 ZMAT4Q9H898 229 aa4.74□□□□□ -1.65
SNX13-213ENST00000611725 TEP1Q99973 2627 aaKnown RBP4.73□□□□□ -1.65
SNX13-213ENST00000611725 PRSS47A8MTI9 375 aa4.73□□□□□ -1.65
SNX13-213ENST00000611725 MAP6D1Q9H9H5 199 aa4.73□□□□□ -1.65
SNX13-213ENST00000611725 UBR5O95071 2799 aaPredicted RBP4.73□□□□□ -1.65
SNX13-213ENST00000611725 Q6ZSV7 163 aa4.73□□□□□ -1.65
SNX13-213ENST00000611725 C9orf85Q96MD7 179 aa4.73□□□□□ -1.65
SNX13-213ENST00000611725 GAGE7O76087 117 aa4.73□□□□□ -1.65
SNX13-213ENST00000611725 GAGE12FP0CL80 117 aa4.73□□□□□ -1.65
SNX13-213ENST00000611725 GAGE12GP0CL81 117 aa4.73□□□□□ -1.65
SNX13-213ENST00000611725 GAGE12IP0CL82 117 aa4.73□□□□□ -1.65
SNX13-213ENST00000611725 DEFB114Q30KQ6 69 aa4.73□□□□□ -1.65
SNX13-213ENST00000611725 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.73□□□□□ -1.65
SNX13-213ENST00000611725 IGKV2-29A2NJV5 120 aaPredicted RBP4.73□□□□□ -1.65
SNX13-213ENST00000611725 A4D1N5 150 aa4.73□□□□□ -1.65
SNX13-213ENST00000611725 TRAV25A0A0B4J276 109 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms