RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 PKD1P98161 4303 aa11.14□□□□□ -0.63
LINC00240-203ENST00000606878 M0QY20 66 aa11.14□□□□□ -0.63
LINC00240-203ENST00000606878 PSCAO43653 123 aa11.14□□□□□ -0.63
LINC00240-203ENST00000606878 TMEM241Q24JQ0 296 aa11.14□□□□□ -0.63
LINC00240-203ENST00000606878 FAM74A3Q4VXF1 159 aa11.14□□□□□ -0.63
LINC00240-203ENST00000606878 KCNIP4Q6PIL6 250 aa11.14□□□□□ -0.63
LINC00240-203ENST00000606878 DAZ4Q86SG3 579 aaKnown RBP11.14□□□□□ -0.63
LINC00240-203ENST00000606878 LINC01551Q86U37 167 aa11.14□□□□□ -0.63
LINC00240-203ENST00000606878 DNAJC30Q96LL9 226 aa11.14□□□□□ -0.63
LINC00240-203ENST00000606878 CNFNQ9BYD5 112 aa11.14□□□□□ -0.63
LINC00240-203ENST00000606878 DPH3P1Q9H4G8 78 aa11.14□□□□□ -0.63
LINC00240-203ENST00000606878 DAZ3Q9NR90 486 aaKnown RBP11.14□□□□□ -0.63
LINC00240-203ENST00000606878 PGPEP1Q9NXJ5 209 aa11.14□□□□□ -0.63
LINC00240-203ENST00000606878 TRBV6-8A0A0A6YYG3 113 aa11.13□□□□□ -0.63
LINC00240-203ENST00000606878 LAGE3Q14657 143 aa11.13□□□□□ -0.63
LINC00240-203ENST00000606878 TMEM97Q5BJF2 176 aa11.13□□□□□ -0.63
LINC00240-203ENST00000606878 NIT1Q86X76 327 aa11.13□□□□□ -0.63
LINC00240-203ENST00000606878 GTSF1Q8WW33 167 aa11.13□□□□□ -0.63
LINC00240-203ENST00000606878 SMDT1Q9H4I9 107 aa11.13□□□□□ -0.63
LINC00240-203ENST00000606878 Q9HAA7 133 aa11.13□□□□□ -0.63
LINC00240-203ENST00000606878 A0A087WTM6 91 aa11.12□□□□□ -0.63
LINC00240-203ENST00000606878 A0A087WX48 190 aa11.12□□□□□ -0.63
LINC00240-203ENST00000606878 TRAV8-3A0A0A6YYJ7 113 aa11.12□□□□□ -0.63
LINC00240-203ENST00000606878 TMEM262E9PQX1 116 aa11.12□□□□□ -0.63
LINC00240-203ENST00000606878 FOXA3P55318 350 aaPredicted RBP11.12□□□□□ -0.63
LINC00240-203ENST00000606878 CT83Q5H943 113 aa11.12□□□□□ -0.63
LINC00240-203ENST00000606878 SUMO4Q6EEV6 95 aa11.12□□□□□ -0.63
LINC00240-203ENST00000606878 SMIM15Q7Z3B0 74 aa11.12□□□□□ -0.63
LINC00240-203ENST00000606878 TM2D2Q9BX73 214 aa11.12□□□□□ -0.63
LINC00240-203ENST00000606878 OSTCQ9NRP0 149 aa11.12□□□□□ -0.63
LINC00240-203ENST00000606878 DNAH11Q96DT5 4516 aa11.12□□□□□ -0.63
LINC00240-203ENST00000606878 KRTAP10-2P60368 255 aa11.11□□□□□ -0.63
LINC00240-203ENST00000606878 ELOBQ15370 118 aa11.11□□□□□ -0.63
LINC00240-203ENST00000606878 RASL11AQ6T310 242 aa11.11□□□□□ -0.63
LINC00240-203ENST00000606878 Q8N3U1 123 aa11.11□□□□□ -0.63
LINC00240-203ENST00000606878 PGLYRP4Q96LB8 373 aa11.11□□□□□ -0.63
LINC00240-203ENST00000606878 CHCHD7Q9BUK0 85 aa11.11□□□□□ -0.63
LINC00240-203ENST00000606878 C15orf54Q8N8G6 183 aa11.1□□□□□ -0.63
LINC00240-203ENST00000606878 BORCS7Q96B45 105 aa11.1□□□□□ -0.63
LINC00240-203ENST00000606878 NIT2Q9NQR4 276 aa11.1□□□□□ -0.63
LINC00240-203ENST00000606878 PKHD1P08F94 4074 aa11.09□□□□□ -0.63
LINC00240-203ENST00000606878 C9JQL5 133 aa11.09□□□□□ -0.63
LINC00240-203ENST00000606878 TSKUQ8WUA8 353 aa11.09□□□□□ -0.63
LINC00240-203ENST00000606878 CHCHD5Q9BSY4 110 aa11.09□□□□□ -0.63
LINC00240-203ENST00000606878 GFRA4Q9GZZ7 299 aa11.09□□□□□ -0.63
LINC00240-203ENST00000606878 KLK12Q9UKR0 248 aa11.09□□□□□ -0.63
LINC00240-203ENST00000606878 FAM231BA6NCW3 169 aa11.08□□□□□ -0.64
LINC00240-203ENST00000606878 RAB14P61106 215 aa11.08□□□□□ -0.64
LINC00240-203ENST00000606878 PKIAP61925 76 aa11.08□□□□□ -0.64
LINC00240-203ENST00000606878 SRSF3P84103 164 aaKnown RBP11.08□□□□□ -0.64
LINC00240-203ENST00000606878 NAT8Q9UHE5 227 aa11.08□□□□□ -0.64
LINC00240-203ENST00000606878 COX11Q9Y6N1 276 aa11.08□□□□□ -0.64
LINC00240-203ENST00000606878 RPL23P62829 140 aaKnown RBP11.07□□□□□ -0.64
LINC00240-203ENST00000606878 NTM-AS1Q6ZSK4 140 aa11.07□□□□□ -0.64
LINC00240-203ENST00000606878 FRZBQ92765 325 aa11.07□□□□□ -0.64
LINC00240-203ENST00000606878 RMI2Q96E14 147 aa11.07□□□□□ -0.64
LINC00240-203ENST00000606878 TRBV25-1A0A075B6N4 114 aa11.06□□□□□ -0.64
LINC00240-203ENST00000606878 A0A1B0GUT8 65 aa11.06□□□□□ -0.64
LINC00240-203ENST00000606878 HIGD1CA8MV81 97 aa11.06□□□□□ -0.64
LINC00240-203ENST00000606878 CDPF1Q6NVV7 123 aa11.06□□□□□ -0.64
LINC00240-203ENST00000606878 ISOC2Q96AB3 205 aa11.06□□□□□ -0.64
LINC00240-203ENST00000606878 DYNC1H1Q14204 4646 aaKnown RBP11.05□□□□□ -0.64
LINC00240-203ENST00000606878 LRCOL1A6NCL2 159 aa11.05□□□□□ -0.64
LINC00240-203ENST00000606878 ADIRFQ15847 76 aa11.05□□□□□ -0.64
LINC00240-203ENST00000606878 GATD1Q8NB37 220 aa11.05□□□□□ -0.64
LINC00240-203ENST00000606878 UBE2WQ96B02 151 aa11.05□□□□□ -0.64
LINC00240-203ENST00000606878 V9GYV3 84 aa11.05□□□□□ -0.64
LINC00240-203ENST00000606878 IGHV1-24A0A0C4DH33 117 aa11.04□□□□□ -0.64
LINC00240-203ENST00000606878 Q0VG73 95 aa11.04□□□□□ -0.64
LINC00240-203ENST00000606878 IQCJQ1A5X6 159 aa11.04□□□□□ -0.64
LINC00240-203ENST00000606878 KIAA1109Q2LD37 5005 aa11.03□□□□□ -0.64
LINC00240-203ENST00000606878 TRAV26-2A0A0B4J265 109 aa11.03□□□□□ -0.64
LINC00240-203ENST00000606878 ATRAIDQ6UW56 229 aa11.03□□□□□ -0.64
LINC00240-203ENST00000606878 IGKV2D-24A0A075B6R9 120 aa11.02□□□□□ -0.65
LINC00240-203ENST00000606878 CDK2AP2O75956 126 aa11.02□□□□□ -0.65
LINC00240-203ENST00000606878 ANGP03950 147 aaKnown RBP11.02□□□□□ -0.65
LINC00240-203ENST00000606878 FUSP35637 526 aaKnown RBP eCLIP11.02□□□□□ -0.65
LINC00240-203ENST00000606878 GAGE6Q13070 117 aa11.02□□□□□ -0.65
LINC00240-203ENST00000606878 RIGQ13278 110 aa11.02□□□□□ -0.65
LINC00240-203ENST00000606878 MPV17L2Q567V2 206 aa11.02□□□□□ -0.65
LINC00240-203ENST00000606878 NAT8BQ9UHF3 227 aa11.02□□□□□ -0.65
LINC00240-203ENST00000606878 COTL1Q14019 142 aa11.01□□□□□ -0.65
LINC00240-203ENST00000606878 Q8N976 141 aa11.01□□□□□ -0.65
LINC00240-203ENST00000606878 NUP35Q8NFH5 326 aa11.01□□□□□ -0.65
LINC00240-203ENST00000606878 TMEM243Q9BU79 118 aa11.01□□□□□ -0.65
LINC00240-203ENST00000606878 TMEM191AQ9H0A3 160 aa11.01□□□□□ -0.65
LINC00240-203ENST00000606878 CRPP02741 224 aa11□□□□□ -0.65
LINC00240-203ENST00000606878 RBX1P62877 108 aa11□□□□□ -0.65
LINC00240-203ENST00000606878 Q8N814 137 aa11□□□□□ -0.65
LINC00240-203ENST00000606878 NTN5Q8WTR8 489 aaPredicted RBP11□□□□□ -0.65
LINC00240-203ENST00000606878 ENHOQ6UWT2 76 aa10.99□□□□□ -0.65
LINC00240-203ENST00000606878 MAPKAPK5-AS1Q8N8E1 139 aa10.99□□□□□ -0.65
LINC00240-203ENST00000606878 BAALCQ8WXS3 180 aa10.99□□□□□ -0.65
LINC00240-203ENST00000606878 RPL39LQ96EH5 51 aaKnown RBP10.99□□□□□ -0.65
LINC00240-203ENST00000606878 IGLV5-52A0A0A0MRZ9 124 aa10.98□□□□□ -0.65
LINC00240-203ENST00000606878 SMIM27A0A1W2PRY6 76 aa10.98□□□□□ -0.65
LINC00240-203ENST00000606878 GCSHP23434 173 aa10.98□□□□□ -0.65
LINC00240-203ENST00000606878 AMTP48728 403 aa10.98□□□□□ -0.65
LINC00240-203ENST00000606878 DEFB104AQ8WTQ1 72 aa10.98□□□□□ -0.65
LINC00240-203ENST00000606878 C1orf43Q9BWL3 253 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms