RNA–Protein interactions for RNA: ENST00000606213.5

PTPRN-219, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-219ENST00000606213 H7C1H1 209 aa15.72■□□□□ 0.11
PTPRN-219ENST00000606213 TRGC1P0CF51 173 aa15.72■□□□□ 0.11
PTPRN-219ENST00000606213 NIT1Q86X76 327 aa15.72■□□□□ 0.11
PTPRN-219ENST00000606213 RNASE7Q9H1E1 156 aaKnown RBP15.72■□□□□ 0.11
PTPRN-219ENST00000606213 RPP21Q9H633 154 aaKnown RBP15.72■□□□□ 0.11
PTPRN-219ENST00000606213 TMEM262E9PQX1 116 aa15.71■□□□□ 0.11
PTPRN-219ENST00000606213 FUSP35637 526 aaKnown RBP eCLIP15.71■□□□□ 0.11
PTPRN-219ENST00000606213 KIF25-AS1Q9Y6Z4 181 aa15.71■□□□□ 0.11
PTPRN-219ENST00000606213 ELOBQ15370 118 aa15.7■□□□□ 0.1
PTPRN-219ENST00000606213 TRBV6-8A0A0A6YYG3 113 aa15.69■□□□□ 0.1
PTPRN-219ENST00000606213 K7EN84 100 aa15.69■□□□□ 0.1
PTPRN-219ENST00000606213 NTF3P20783 257 aa15.69■□□□□ 0.1
PTPRN-219ENST00000606213 TMEM97Q5BJF2 176 aa15.69■□□□□ 0.1
PTPRN-219ENST00000606213 RMI2Q96E14 147 aa15.69■□□□□ 0.1
PTPRN-219ENST00000606213 CHCHD7Q9BUK0 85 aa15.69■□□□□ 0.1
PTPRN-219ENST00000606213 RYR1P21817 5038 aa15.69■□□□□ 0.1
PTPRN-219ENST00000606213 TWIST1Q15672 202 aa15.68■□□□□ 0.1
PTPRN-219ENST00000606213 KLK12Q9UKR0 248 aa15.68■□□□□ 0.1
PTPRN-219ENST00000606213 COX11Q9Y6N1 276 aa15.68■□□□□ 0.1
PTPRN-219ENST00000606213 SMIM7Q9BQ49 75 aa15.67■□□□□ 0.1
PTPRN-219ENST00000606213 CHCHD5Q9BSY4 110 aa15.67■□□□□ 0.1
PTPRN-219ENST00000606213 DPH3P1Q9H4G8 78 aa15.67■□□□□ 0.1
PTPRN-219ENST00000606213 GATCO43716 136 aaKnown RBP15.66■□□□□ 0.1
PTPRN-219ENST00000606213 CTRLP40313 264 aa15.66■□□□□ 0.1
PTPRN-219ENST00000606213 PKIAP61925 76 aa15.66■□□□□ 0.1
PTPRN-219ENST00000606213 WDR73Q6P4I2 378 aa15.66■□□□□ 0.1
PTPRN-219ENST00000606213 MAPKAPK5-AS1Q8N8E1 139 aa15.66■□□□□ 0.1
PTPRN-219ENST00000606213 DNAJC30Q96LL9 226 aa15.66■□□□□ 0.1
PTPRN-219ENST00000606213 FAM210AQ96ND0 272 aa15.66■□□□□ 0.1
PTPRN-219ENST00000606213 LRCOL1A6NCL2 159 aa15.65■□□□□ 0.1
PTPRN-219ENST00000606213 SUMO4Q6EEV6 95 aa15.65■□□□□ 0.1
PTPRN-219ENST00000606213 SMIM15Q7Z3B0 74 aa15.65■□□□□ 0.1
PTPRN-219ENST00000606213 UBE2WQ96B02 151 aa15.65■□□□□ 0.1
PTPRN-219ENST00000606213 IGLV5-52A0A0A0MRZ9 124 aa15.64■□□□□ 0.09
PTPRN-219ENST00000606213 M0QY20 66 aa15.64■□□□□ 0.09
PTPRN-219ENST00000606213 IGKV2D-24A0A075B6R9 120 aa15.63■□□□□ 0.09
PTPRN-219ENST00000606213 A8MWL6 223 aa15.63■□□□□ 0.09
PTPRN-219ENST00000606213 RASL11AQ6T310 242 aa15.63■□□□□ 0.09
PTPRN-219ENST00000606213 NTN5Q8WTR8 489 aaPredicted RBP15.63■□□□□ 0.09
PTPRN-219ENST00000606213 LRP1BQ9NZR2 4599 aa15.62■□□□□ 0.09
PTPRN-219ENST00000606213 TRBV25-1A0A075B6N4 114 aa15.62■□□□□ 0.09
PTPRN-219ENST00000606213 ZNF727A8MUV8 499 aa15.62■□□□□ 0.09
PTPRN-219ENST00000606213 CRPP02741 224 aa15.62■□□□□ 0.09
PTPRN-219ENST00000606213 GCSHP23434 173 aa15.62■□□□□ 0.09
PTPRN-219ENST00000606213 FAM231DQ6ZW35 169 aa15.62■□□□□ 0.09
PTPRN-219ENST00000606213 Q8N814 137 aa15.62■□□□□ 0.09
PTPRN-219ENST00000606213 HSPG2P98160 4391 aa15.61■□□□□ 0.09
PTPRN-219ENST00000606213 NDUFS6O75380 124 aaKnown RBP15.61■□□□□ 0.09
PTPRN-219ENST00000606213 Q0VG73 95 aa15.61■□□□□ 0.09
PTPRN-219ENST00000606213 BORCS7Q96B45 105 aa15.61■□□□□ 0.09
PTPRN-219ENST00000606213 ANGP03950 147 aaKnown RBP15.6■□□□□ 0.09
PTPRN-219ENST00000606213 C15orf54Q8N8G6 183 aa15.6■□□□□ 0.09
PTPRN-219ENST00000606213 CNFNQ9BYD5 112 aa15.6■□□□□ 0.09
PTPRN-219ENST00000606213 NIT2Q9NQR4 276 aa15.6■□□□□ 0.09
PTPRN-219ENST00000606213 ABCA13Q86UQ4 5058 aa15.59■□□□□ 0.09
PTPRN-219ENST00000606213 MPV17L2Q567V2 206 aa15.59■□□□□ 0.09
PTPRN-219ENST00000606213 GTSF1Q8WW33 167 aa15.59■□□□□ 0.09
PTPRN-219ENST00000606213 IGHV1-24A0A0C4DH33 117 aa15.58■□□□□ 0.08
PTPRN-219ENST00000606213 LECT2O14960 151 aa15.58■□□□□ 0.08
PTPRN-219ENST00000606213 SRP19P09132 144 aaKnown RBP15.58■□□□□ 0.08
PTPRN-219ENST00000606213 CT83Q5H943 113 aa15.58■□□□□ 0.08
PTPRN-219ENST00000606213 NTM-AS1Q6ZSK4 140 aa15.58■□□□□ 0.08
PTPRN-219ENST00000606213 PGLYRP4Q96LB8 373 aa15.58■□□□□ 0.08
PTPRN-219ENST00000606213 LINC01551Q86U37 167 aa15.57■□□□□ 0.08
PTPRN-219ENST00000606213 BAALCQ8WXS3 180 aa15.57■□□□□ 0.08
PTPRN-219ENST00000606213 C1orf43Q9BWL3 253 aa15.57■□□□□ 0.08
PTPRN-219ENST00000606213 KRTAP10-1P60331 282 aa15.56■□□□□ 0.08
PTPRN-219ENST00000606213 GAGE6Q13070 117 aa15.56■□□□□ 0.08
PTPRN-219ENST00000606213 ATRAIDQ6UW56 229 aa15.56■□□□□ 0.08
PTPRN-219ENST00000606213 TEX261Q6UWH6 196 aa15.56■□□□□ 0.08
PTPRN-219ENST00000606213 KRTAP4-5Q9BYR2 181 aa15.56■□□□□ 0.08
PTPRN-219ENST00000606213 Q8N976 141 aa15.55■□□□□ 0.08
PTPRN-219ENST00000606213 IQCJQ1A5X6 159 aa15.54■□□□□ 0.08
PTPRN-219ENST00000606213 FAM74A3Q4VXF1 159 aa15.54■□□□□ 0.08
PTPRN-219ENST00000606213 Q8N1X5 172 aa15.54■□□□□ 0.08
PTPRN-219ENST00000606213 FRZBQ92765 325 aa15.54■□□□□ 0.08
PTPRN-219ENST00000606213 WFDC2Q14508 124 aa15.53■□□□□ 0.08
PTPRN-219ENST00000606213 TMEM241Q24JQ0 296 aa15.53■□□□□ 0.08
PTPRN-219ENST00000606213 TSKUQ8WUA8 353 aa15.53■□□□□ 0.08
PTPRN-219ENST00000606213 TMEM243Q9BU79 118 aa15.53■□□□□ 0.08
PTPRN-219ENST00000606213 OSTCQ9NRP0 149 aa15.53■□□□□ 0.08
PTPRN-219ENST00000606213 DNAH5Q8TE73 4624 aa15.52■□□□□ 0.08
PTPRN-219ENST00000606213 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.52■□□□□ 0.08
PTPRN-219ENST00000606213 TRAV26-2A0A0B4J265 109 aa15.52■□□□□ 0.08
PTPRN-219ENST00000606213 UBE2L6O14933 153 aa15.52■□□□□ 0.08
PTPRN-219ENST00000606213 RBX1P62877 108 aa15.52■□□□□ 0.08
PTPRN-219ENST00000606213 COTL1Q14019 142 aa15.52■□□□□ 0.08
PTPRN-219ENST00000606213 PEA15Q15121 130 aa15.52■□□□□ 0.08
PTPRN-219ENST00000606213 HIGD1CA8MV81 97 aa15.51■□□□□ 0.07
PTPRN-219ENST00000606213 FOXA3P55318 350 aaPredicted RBP15.51■□□□□ 0.07
PTPRN-219ENST00000606213 MIAQ16674 131 aa15.51■□□□□ 0.07
PTPRN-219ENST00000606213 ENHOQ6UWT2 76 aa15.51■□□□□ 0.07
PTPRN-219ENST00000606213 GATD1Q8NB37 220 aa15.51■□□□□ 0.07
PTPRN-219ENST00000606213 GFRA4Q9GZZ7 299 aa15.51■□□□□ 0.07
PTPRN-219ENST00000606213 A0A1B0GUT8 65 aa15.5■□□□□ 0.07
PTPRN-219ENST00000606213 DEFB104AQ8WTQ1 72 aa15.5■□□□□ 0.07
PTPRN-219ENST00000606213 FAM231BA6NCW3 169 aa15.49■□□□□ 0.07
PTPRN-219ENST00000606213 AMTP48728 403 aa15.49■□□□□ 0.07
PTPRN-219ENST00000606213 ADIRFQ15847 76 aa15.49■□□□□ 0.07
PTPRN-219ENST00000606213 CLPSL2Q6UWE3 100 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms