RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 SDIM1Q6ZPB5 146 aa3.52□□□□□ -1.85
LINC01109-201ENST00000603837 TMEM263Q8WUH6 116 aaKnown RBP3.52□□□□□ -1.85
LINC01109-201ENST00000603837 SPENQ96T58 3664 aaKnown RBP3.52□□□□□ -1.85
LINC01109-201ENST00000603837 TRGV5A0A0B4J1U4 118 aa3.52□□□□□ -1.85
LINC01109-201ENST00000603837 LINC00473A8K010 186 aa3.52□□□□□ -1.85
LINC01109-201ENST00000603837 FOLR3P41439 243 aa3.52□□□□□ -1.85
LINC01109-201ENST00000603837 RBM3P98179 157 aaKnown RBP3.52□□□□□ -1.85
LINC01109-201ENST00000603837 ERCC8Q13216 396 aa3.52□□□□□ -1.85
LINC01109-201ENST00000603837 FAM53AQ6NSI3 398 aaPredicted RBP3.52□□□□□ -1.85
LINC01109-201ENST00000603837 TMEM190Q8WZ59 177 aa3.52□□□□□ -1.85
LINC01109-201ENST00000603837 MAP6D1Q9H9H5 199 aa3.52□□□□□ -1.85
LINC01109-201ENST00000603837 DYNLRB1Q9NP97 96 aa3.52□□□□□ -1.85
LINC01109-201ENST00000603837 EPG5Q9HCE0 2579 aa3.52□□□□□ -1.85
LINC01109-201ENST00000603837 TRAV12-1A0A0B4J245 112 aa3.52□□□□□ -1.85
LINC01109-201ENST00000603837 IGHV3-20A0A0C4DH32 117 aa3.52□□□□□ -1.85
LINC01109-201ENST00000603837 TRBV30A0A0K0K1B3 111 aa3.52□□□□□ -1.85
LINC01109-201ENST00000603837 M0R378 163 aa3.52□□□□□ -1.85
LINC01109-201ENST00000603837 LST1O00453 97 aa3.52□□□□□ -1.85
LINC01109-201ENST00000603837 RNASE2P10153 161 aaKnown RBP3.52□□□□□ -1.85
LINC01109-201ENST00000603837 COX6B1P14854 86 aa3.52□□□□□ -1.85
LINC01109-201ENST00000603837 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.52□□□□□ -1.85
LINC01109-201ENST00000603837 FAM223AQ8IWN6 122 aa3.52□□□□□ -1.85
LINC01109-201ENST00000603837 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.52□□□□□ -1.85
LINC01109-201ENST00000603837 KLHL30-AS1Q8NEE0 82 aa3.52□□□□□ -1.85
LINC01109-201ENST00000603837 NUP37Q8NFH4 326 aa3.52□□□□□ -1.85
LINC01109-201ENST00000603837 MAP1AP78559 2803 aaPredicted RBP3.51□□□□□ -1.85
LINC01109-201ENST00000603837 TRAV3A0A0B4J244 114 aa3.51□□□□□ -1.85
LINC01109-201ENST00000603837 COX6CP09669 75 aa3.51□□□□□ -1.85
LINC01109-201ENST00000603837 LINC00313P59037 77 aa3.51□□□□□ -1.85
LINC01109-201ENST00000603837 C6orf99Q4VX62 202 aa3.51□□□□□ -1.85
LINC01109-201ENST00000603837 COPS9Q8WXC6 57 aa3.51□□□□□ -1.85
LINC01109-201ENST00000603837 NBEAQ8NFP9 2946 aa3.51□□□□□ -1.85
LINC01109-201ENST00000603837 ICE1Q9Y2F5 2266 aa3.51□□□□□ -1.85
LINC01109-201ENST00000603837 TNRC6BQ9UPQ9 1833 aaKnown RBP3.51□□□□□ -1.85
LINC01109-201ENST00000603837 PTPRQQ9UMZ3 2332 aa3.51□□□□□ -1.85
LINC01109-201ENST00000603837 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.51□□□□□ -1.85
LINC01109-201ENST00000603837 WNT9BO14905 357 aa3.51□□□□□ -1.85
LINC01109-201ENST00000603837 CCL4P13236 92 aa3.51□□□□□ -1.85
LINC01109-201ENST00000603837 ZNF80P51504 273 aaPredicted RBP3.51□□□□□ -1.85
LINC01109-201ENST00000603837 ATP1A1-AS1Q5TC04 95 aa3.51□□□□□ -1.85
LINC01109-201ENST00000603837 C16orf47Q6ZP98 133 aaPredicted RBP3.51□□□□□ -1.85
LINC01109-201ENST00000603837 SLC25A29Q8N8R3 303 aa3.51□□□□□ -1.85
LINC01109-201ENST00000603837 ZNRF1Q8ND25 227 aa3.51□□□□□ -1.85
LINC01109-201ENST00000603837 SLC50A1Q9BRV3 221 aa3.51□□□□□ -1.85
LINC01109-201ENST00000603837 Q9H3A6 140 aa3.51□□□□□ -1.85
LINC01109-201ENST00000603837 Q9HAA7 133 aa3.51□□□□□ -1.85
LINC01109-201ENST00000603837 DOCK10Q96BY6 2186 aa3.5□□□□□ -1.85
LINC01109-201ENST00000603837 IGKV3D-11A0A0A0MRZ8 115 aa3.5□□□□□ -1.85
LINC01109-201ENST00000603837 RNASE6Q93091 150 aaKnown RBP3.5□□□□□ -1.85
LINC01109-201ENST00000603837 KALRNO60229 2985 aa3.5□□□□□ -1.85
LINC01109-201ENST00000603837 ADGRG4Q8IZF6 3080 aa3.5□□□□□ -1.85
LINC01109-201ENST00000603837 AKAP6Q13023 2319 aa3.5□□□□□ -1.85
LINC01109-201ENST00000603837 LY6G6EA0A0G2JKS1 128 aa3.5□□□□□ -1.85
LINC01109-201ENST00000603837 IGKV3-11P04433 115 aa3.5□□□□□ -1.85
LINC01109-201ENST00000603837 C10orf128Q5T292 105 aa3.5□□□□□ -1.85
LINC01109-201ENST00000603837 FGF23Q9GZV9 251 aaPredicted RBP3.5□□□□□ -1.85
LINC01109-201ENST00000603837 U3KQA8 63 aa3.5□□□□□ -1.85
LINC01109-201ENST00000603837 DSCAML1Q8TD84 2053 aa3.5□□□□□ -1.85
LINC01109-201ENST00000603837 PRR14LQ5THK1 2151 aa3.5□□□□□ -1.85
LINC01109-201ENST00000603837 FAM223BA6NKX1 122 aa3.5□□□□□ -1.85
LINC01109-201ENST00000603837 PRSS2P07478 247 aa3.5□□□□□ -1.85
LINC01109-201ENST00000603837 GFRALQ6UXV0 394 aa3.5□□□□□ -1.85
LINC01109-201ENST00000603837 PATE2Q6UY27 113 aa3.5□□□□□ -1.85
LINC01109-201ENST00000603837 CLEC2BQ92478 149 aa3.5□□□□□ -1.85
LINC01109-201ENST00000603837 C8orf49Q96NF6 230 aa3.5□□□□□ -1.85
LINC01109-201ENST00000603837 LINC00474Q9P2X8 69 aa3.5□□□□□ -1.85
LINC01109-201ENST00000603837 SLC25A15Q9Y619 301 aa3.5□□□□□ -1.85
LINC01109-201ENST00000603837 ICOSQ9Y6W8 199 aa3.5□□□□□ -1.85
LINC01109-201ENST00000603837 CENPEQ02224 2701 aa3.49□□□□□ -1.85
LINC01109-201ENST00000603837 IGHV5-10-1A0A0J9YXX1 117 aa3.49□□□□□ -1.85
LINC01109-201ENST00000603837 TMEM223A0PJW6 202 aa3.49□□□□□ -1.85
LINC01109-201ENST00000603837 COX7A2LO14548 114 aa3.49□□□□□ -1.85
LINC01109-201ENST00000603837 TIMM17BO60830 172 aa3.49□□□□□ -1.85
LINC01109-201ENST00000603837 GAS8-AS1O95177 125 aa3.49□□□□□ -1.85
LINC01109-201ENST00000603837 IGHG2P01859 326 aa3.49□□□□□ -1.85
LINC01109-201ENST00000603837 MRPS36P82909 103 aaKnown RBP3.49□□□□□ -1.85
LINC01109-201ENST00000603837 C17orf82Q86X59 251 aaPredicted RBP3.49□□□□□ -1.85
LINC01109-201ENST00000603837 TIMM21Q9BVV7 248 aa3.49□□□□□ -1.85
LINC01109-201ENST00000603837 CTSZQ9UBR2 303 aa3.49□□□□□ -1.85
LINC01109-201ENST00000603837 CACNA1BQ00975 2339 aa3.49□□□□□ -1.85
LINC01109-201ENST00000603837 INAFM1C9JVW0 142 aa3.49□□□□□ -1.85
LINC01109-201ENST00000603837 H0Y9J4 135 aa3.49□□□□□ -1.85
LINC01109-201ENST00000603837 M0R3E3 92 aa3.49□□□□□ -1.85
LINC01109-201ENST00000603837 MP68P56378 58 aa3.49□□□□□ -1.85
LINC01109-201ENST00000603837 C20orf197Q8N268 126 aa3.49□□□□□ -1.85
LINC01109-201ENST00000603837 NRACQ8N912 160 aa3.49□□□□□ -1.85
LINC01109-201ENST00000603837 RNF185Q96GF1 192 aa3.49□□□□□ -1.85
LINC01109-201ENST00000603837 SCGB3A1Q96QR1 104 aa3.49□□□□□ -1.85
LINC01109-201ENST00000603837 IGLV2-18A0A075B6J9 118 aa3.48□□□□□ -1.85
LINC01109-201ENST00000603837 TRBV19A0A075B6N1 114 aa3.48□□□□□ -1.85
LINC01109-201ENST00000603837 A0A087WVE0 104 aa3.48□□□□□ -1.85
LINC01109-201ENST00000603837 IGKV3D-7A0A0C4DH55 119 aa3.48□□□□□ -1.85
LINC01109-201ENST00000603837 TRBV6-1A0A0K0K1D8 114 aa3.48□□□□□ -1.85
LINC01109-201ENST00000603837 C12orf77C9JDV5 145 aa3.48□□□□□ -1.85
LINC01109-201ENST00000603837 IGLV2-11P01706 119 aa3.48□□□□□ -1.85
LINC01109-201ENST00000603837 ZNF32P17041 273 aa3.48□□□□□ -1.85
LINC01109-201ENST00000603837 FAM27BQ5VT28 67 aa3.48□□□□□ -1.85
LINC01109-201ENST00000603837 C14orf178Q8N769 122 aaPredicted RBP3.48□□□□□ -1.85
LINC01109-201ENST00000603837 IGHV3-43A0A0B4J1X8 118 aa3.48□□□□□ -1.85
LINC01109-201ENST00000603837 KRTAP9-7A8MTY7 169 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms