RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 ANGP03950 147 aaKnown RBP11.61□□□□□ -0.55
CHMP2A-208ENST00000601220 PRSS1P07477 247 aa11.61□□□□□ -0.55
CHMP2A-208ENST00000601220 BAGE2Q86Y30 109 aa11.61□□□□□ -0.55
CHMP2A-208ENST00000601220 SFT2D1Q8WV19 159 aa11.61□□□□□ -0.55
CHMP2A-208ENST00000601220 SMLR1H3BR10 107 aa11.6□□□□□ -0.55
CHMP2A-208ENST00000601220 CRPP02741 224 aa11.6□□□□□ -0.55
CHMP2A-208ENST00000601220 MIAQ16674 131 aa11.6□□□□□ -0.55
CHMP2A-208ENST00000601220 SERTAD4-AS1Q5TG53 156 aa11.6□□□□□ -0.55
CHMP2A-208ENST00000601220 CHCHD5Q9BSY4 110 aa11.6□□□□□ -0.55
CHMP2A-208ENST00000601220 HNRNPA3P51991 378 aaKnown RBP11.59□□□□□ -0.55
CHMP2A-208ENST00000601220 KCNRGQ8N5I3 272 aa11.59□□□□□ -0.55
CHMP2A-208ENST00000601220 RBX1P62877 108 aa11.58□□□□□ -0.56
CHMP2A-208ENST00000601220 SPANXN1Q5VSR9 72 aa11.58□□□□□ -0.56
CHMP2A-208ENST00000601220 DGAT2L7PQ6IED9 249 aa11.58□□□□□ -0.56
CHMP2A-208ENST00000601220 C9orf163Q8N9P6 203 aa11.58□□□□□ -0.56
CHMP2A-208ENST00000601220 FAM213BQ8TBF2 198 aa11.58□□□□□ -0.56
CHMP2A-208ENST00000601220 DAZAP1Q96EP5 407 aaKnown RBP11.58□□□□□ -0.56
CHMP2A-208ENST00000601220 A0A1B0GV50 99 aa11.57□□□□□ -0.56
CHMP2A-208ENST00000601220 PANO1I0J062 215 aa11.57□□□□□ -0.56
CHMP2A-208ENST00000601220 PKIAP61925 76 aa11.57□□□□□ -0.56
CHMP2A-208ENST00000601220 ZNF345Q14585 488 aa11.57□□□□□ -0.56
CHMP2A-208ENST00000601220 TMEM97Q5BJF2 176 aa11.57□□□□□ -0.56
CHMP2A-208ENST00000601220 TMUB2Q71RG4 321 aa11.57□□□□□ -0.56
CHMP2A-208ENST00000601220 UMAD1C9J7I0 102 aa11.56□□□□□ -0.56
CHMP2A-208ENST00000601220 F5H697 171 aa11.56□□□□□ -0.56
CHMP2A-208ENST00000601220 HLA-DQA1P01909 254 aa11.56□□□□□ -0.56
CHMP2A-208ENST00000601220 SSTP61278 116 aa11.56□□□□□ -0.56
CHMP2A-208ENST00000601220 LINC00269Q8N2A0 174 aa11.56□□□□□ -0.56
CHMP2A-208ENST00000601220 DERL1Q9BUN8 251 aa11.56□□□□□ -0.56
CHMP2A-208ENST00000601220 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.56□□□□□ -0.56
CHMP2A-208ENST00000601220 UBR4Q5T4S7 5183 aa11.56□□□□□ -0.56
CHMP2A-208ENST00000601220 M0QY20 66 aa11.55□□□□□ -0.56
CHMP2A-208ENST00000601220 RPL37AP61513 92 aaKnown RBP11.55□□□□□ -0.56
CHMP2A-208ENST00000601220 GAGE6Q13070 117 aa11.55□□□□□ -0.56
CHMP2A-208ENST00000601220 IQCJQ1A5X6 159 aa11.55□□□□□ -0.56
CHMP2A-208ENST00000601220 SDIM1Q6ZPB5 146 aa11.55□□□□□ -0.56
CHMP2A-208ENST00000601220 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.55□□□□□ -0.56
CHMP2A-208ENST00000601220 RPL35P42766 123 aaKnown RBP11.54□□□□□ -0.56
CHMP2A-208ENST00000601220 CLPSL2Q6UWE3 100 aa11.54□□□□□ -0.56
CHMP2A-208ENST00000601220 PFDN1O60925 122 aa11.53□□□□□ -0.56
CHMP2A-208ENST00000601220 IGLC6P0CF74 106 aa11.53□□□□□ -0.56
CHMP2A-208ENST00000601220 CCL20P78556 96 aa11.53□□□□□ -0.56
CHMP2A-208ENST00000601220 TRBV25-1A0A075B6N4 114 aa11.52□□□□□ -0.57
CHMP2A-208ENST00000601220 HMSDA8MTL9 139 aa11.52□□□□□ -0.57
CHMP2A-208ENST00000601220 H2AFB1P0C5Y9 115 aa11.52□□□□□ -0.57
CHMP2A-208ENST00000601220 GZMBP10144 247 aa11.52□□□□□ -0.57
CHMP2A-208ENST00000601220 RGS21Q2M5E4 152 aa11.52□□□□□ -0.57
CHMP2A-208ENST00000601220 C11orf52Q96A22 123 aa11.52□□□□□ -0.57
CHMP2A-208ENST00000601220 AP1S3Q96PC3 154 aa11.52□□□□□ -0.57
CHMP2A-208ENST00000601220 SMIM17P0DL12 118 aa11.51□□□□□ -0.57
CHMP2A-208ENST00000601220 CIRBPQ14011 172 aaKnown RBP11.51□□□□□ -0.57
CHMP2A-208ENST00000601220 C20orf203Q8NBC4 194 aa11.51□□□□□ -0.57
CHMP2A-208ENST00000601220 IGHV1-24A0A0C4DH33 117 aa11.5□□□□□ -0.57
CHMP2A-208ENST00000601220 C19orf71A6NCJ1 209 aa11.5□□□□□ -0.57
CHMP2A-208ENST00000601220 BCL2L11O43521 198 aa11.5□□□□□ -0.57
CHMP2A-208ENST00000601220 CNBPP62633 177 aaKnown RBP11.5□□□□□ -0.57
CHMP2A-208ENST00000601220 REG3AQ06141 175 aa11.5□□□□□ -0.57
CHMP2A-208ENST00000601220 SUMO4Q6EEV6 95 aa11.5□□□□□ -0.57
CHMP2A-208ENST00000601220 CLRN3Q8NCR9 226 aa11.5□□□□□ -0.57
CHMP2A-208ENST00000601220 GFRA4Q9GZZ7 299 aa11.5□□□□□ -0.57
CHMP2A-208ENST00000601220 IGLV10-54A0A075B6I4 117 aa11.49□□□□□ -0.57
CHMP2A-208ENST00000601220 A0A0D9SG52 128 aa11.49□□□□□ -0.57
CHMP2A-208ENST00000601220 A0A1B0GUV1 79 aa11.49□□□□□ -0.57
CHMP2A-208ENST00000601220 SLPIP03973 132 aa11.49□□□□□ -0.57
CHMP2A-208ENST00000601220 IGLV4-60A0A075B6I1 120 aa11.48□□□□□ -0.57
CHMP2A-208ENST00000601220 TRAV1-1A0A0B4J248 108 aa11.48□□□□□ -0.57
CHMP2A-208ENST00000601220 MT1HL1P0DM35 61 aa11.48□□□□□ -0.57
CHMP2A-208ENST00000601220 CENPWQ5EE01 88 aa11.48□□□□□ -0.57
CHMP2A-208ENST00000601220 FER1L6-AS1Q8NA97 138 aa11.48□□□□□ -0.57
CHMP2A-208ENST00000601220 MGPP08493 103 aa11.47□□□□□ -0.57
CHMP2A-208ENST00000601220 OR2D3Q8NGH3 330 aa11.47□□□□□ -0.57
CHMP2A-208ENST00000601220 MANBALQ9NQG1 85 aa11.47□□□□□ -0.57
CHMP2A-208ENST00000601220 PLA2G2DQ9UNK4 145 aa11.47□□□□□ -0.57
CHMP2A-208ENST00000601220 TRAV8-4A0A0B4J246 113 aa11.46□□□□□ -0.57
CHMP2A-208ENST00000601220 KANTRA0A1W2PQU2 76 aa11.46□□□□□ -0.57
CHMP2A-208ENST00000601220 RAB19A4D1S5 217 aa11.46□□□□□ -0.57
CHMP2A-208ENST00000601220 H7C1H1 209 aa11.46□□□□□ -0.57
CHMP2A-208ENST00000601220 P01737 135 aa11.46□□□□□ -0.57
CHMP2A-208ENST00000601220 NKX2-5P52952 324 aaPredicted RBP11.46□□□□□ -0.57
CHMP2A-208ENST00000601220 RPS20P60866 119 aaKnown RBP11.46□□□□□ -0.57
CHMP2A-208ENST00000601220 CACNG7P62955 275 aa11.46□□□□□ -0.57
CHMP2A-208ENST00000601220 TPPP3Q9BW30 176 aa11.46□□□□□ -0.57
CHMP2A-208ENST00000601220 GNG13Q9P2W3 67 aa11.46□□□□□ -0.57
CHMP2A-208ENST00000601220 RASL11AQ6T310 242 aa11.45□□□□□ -0.58
CHMP2A-208ENST00000601220 TMEM243Q9BU79 118 aa11.45□□□□□ -0.58
CHMP2A-208ENST00000601220 hDV102S1A0JD36 115 aa11.44□□□□□ -0.58
CHMP2A-208ENST00000601220 SMIM12Q96EX1 92 aa11.44□□□□□ -0.58
CHMP2A-208ENST00000601220 PGLYRP4Q96LB8 373 aa11.44□□□□□ -0.58
CHMP2A-208ENST00000601220 TRBV20OR9-2A0A075B6H5 130 aa11.43□□□□□ -0.58
CHMP2A-208ENST00000601220 F2Z2F3 143 aa11.43□□□□□ -0.58
CHMP2A-208ENST00000601220 EIF5AP63241 154 aaKnown RBP11.43□□□□□ -0.58
CHMP2A-208ENST00000601220 LYZL1Q6UWQ5 148 aa11.43□□□□□ -0.58
CHMP2A-208ENST00000601220 NIT2Q9NQR4 276 aa11.43□□□□□ -0.58
CHMP2A-208ENST00000601220 NTF3P20783 257 aa11.42□□□□□ -0.58
CHMP2A-208ENST00000601220 RAB5CP51148 216 aa11.42□□□□□ -0.58
CHMP2A-208ENST00000601220 Q6ZRU5 148 aa11.42□□□□□ -0.58
CHMP2A-208ENST00000601220 C9orf62Q8N4C0 152 aa11.42□□□□□ -0.58
CHMP2A-208ENST00000601220 TNXBP22105 4242 aa11.41□□□□□ -0.58
CHMP2A-208ENST00000601220 IGHV3-64A0A075B6Q5 118 aa11.41□□□□□ -0.58
CHMP2A-208ENST00000601220 CHTF8P0CG12 524 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms