RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 CRXO43186 299 aaPredicted RBP8□□□□□ -1.13
LIG1-220ENST00000601091 LGALS3P17931 250 aaKnown RBP8□□□□□ -1.13
LIG1-220ENST00000601091 SVEP1Q4LDE5 3571 aa8□□□□□ -1.13
LIG1-220ENST00000601091 CFAP126Q5VTH2 177 aa8□□□□□ -1.13
LIG1-220ENST00000601091 NTN5Q8WTR8 489 aaPredicted RBP8□□□□□ -1.13
LIG1-220ENST00000601091 IGLV2-11P01706 119 aa8□□□□□ -1.13
LIG1-220ENST00000601091 APOC4P55056 127 aa8□□□□□ -1.13
LIG1-220ENST00000601091 C12orf74Q32Q52 190 aa8□□□□□ -1.13
LIG1-220ENST00000601091 RHPN1-AS1Q9BWJ2 59 aa8□□□□□ -1.13
LIG1-220ENST00000601091 PAX4O43316 350 aa7.99□□□□□ -1.13
LIG1-220ENST00000601091 COX7CP15954 63 aa7.99□□□□□ -1.13
LIG1-220ENST00000601091 LINC01549A6NIU2 74 aa7.99□□□□□ -1.13
LIG1-220ENST00000601091 KNCNA6PVL3 124 aa7.99□□□□□ -1.13
LIG1-220ENST00000601091 HOXA3O43365 443 aaPredicted RBP7.99□□□□□ -1.13
LIG1-220ENST00000601091 TCL1BO95988 128 aa7.99□□□□□ -1.13
LIG1-220ENST00000601091 PLEKHB2Q96CS7 222 aa7.99□□□□□ -1.13
LIG1-220ENST00000601091 IGF2RP11717 2491 aa7.99□□□□□ -1.13
LIG1-220ENST00000601091 TRAV26-2A0A0B4J265 109 aa7.98□□□□□ -1.13
LIG1-220ENST00000601091 IGHV1-69DA0A0B4J2H0 117 aa7.98□□□□□ -1.13
LIG1-220ENST00000601091 ZNF815PA8K554 130 aa7.98□□□□□ -1.13
LIG1-220ENST00000601091 IGHV1-69P01742 117 aa7.98□□□□□ -1.13
LIG1-220ENST00000601091 CRIP1P50238 77 aa7.98□□□□□ -1.13
LIG1-220ENST00000601091 SUMO2P61956 95 aaKnown RBP7.98□□□□□ -1.13
LIG1-220ENST00000601091 GATA1P15976 413 aaPredicted RBP7.98□□□□□ -1.13
LIG1-220ENST00000601091 ZFP36P26651 326 aaKnown RBP7.98□□□□□ -1.13
LIG1-220ENST00000601091 ANKRD11Q6UB99 2663 aaPredicted RBP7.98□□□□□ -1.13
LIG1-220ENST00000601091 PRAC2D3DTV9 90 aa7.98□□□□□ -1.13
LIG1-220ENST00000601091 F6UB75 175 aa7.98□□□□□ -1.13
LIG1-220ENST00000601091 DYNLRB2Q8TF09 96 aa7.98□□□□□ -1.13
LIG1-220ENST00000601091 MRPL35Q9NZE8 188 aaKnown RBP7.98□□□□□ -1.13
LIG1-220ENST00000601091 ASH1LQ9NR48 2969 aaKnown RBP7.98□□□□□ -1.13
LIG1-220ENST00000601091 ODF3BA8MYP8 253 aa7.97□□□□□ -1.13
LIG1-220ENST00000601091 HLA-DRB4P13762 266 aa7.97□□□□□ -1.13
LIG1-220ENST00000601091 DAZ1Q9NQZ3 744 aaKnown RBP7.97□□□□□ -1.13
LIG1-220ENST00000601091 HLA-DRB4X5D2U9 266 aa7.97□□□□□ -1.13
LIG1-220ENST00000601091 NDUFA4O00483 81 aa7.97□□□□□ -1.13
LIG1-220ENST00000601091 GNLYP22749 145 aa7.97□□□□□ -1.13
LIG1-220ENST00000601091 DAZ2Q13117 558 aaKnown RBP7.97□□□□□ -1.13
LIG1-220ENST00000601091 DAZ4Q86SG3 579 aaKnown RBP7.97□□□□□ -1.13
LIG1-220ENST00000601091 DAZ3Q9NR90 486 aaKnown RBP7.97□□□□□ -1.13
LIG1-220ENST00000601091 PTPRBP23467 1997 aa7.97□□□□□ -1.13
LIG1-220ENST00000601091 OVOL3O00110 214 aa7.97□□□□□ -1.13
LIG1-220ENST00000601091 PRSS2P07478 247 aa7.97□□□□□ -1.13
LIG1-220ENST00000601091 LENEPQ9Y5L5 61 aa7.97□□□□□ -1.13
LIG1-220ENST00000601091 SMIM2Q9BVW6 85 aa7.96□□□□□ -1.13
LIG1-220ENST00000601091 C11orf68Q9H3H3 251 aaKnown RBP7.96□□□□□ -1.13
LIG1-220ENST00000601091 PRO0461Q9UI25 63 aa7.96□□□□□ -1.13
LIG1-220ENST00000601091 ACACBO00763 2458 aa7.96□□□□□ -1.13
LIG1-220ENST00000601091 VCYO14598 125 aa7.96□□□□□ -1.13
LIG1-220ENST00000601091 ZNF80P51504 273 aaPredicted RBP7.96□□□□□ -1.13
LIG1-220ENST00000601091 AGRNO00468 2067 aa7.96□□□□□ -1.14
LIG1-220ENST00000601091 CEMP1Q6PRD7 247 aaPredicted RBP7.96□□□□□ -1.14
LIG1-220ENST00000601091 C2orf66Q6UXQ4 117 aa7.96□□□□□ -1.14
LIG1-220ENST00000601091 CUL9Q8IWT3 2517 aa7.96□□□□□ -1.14
LIG1-220ENST00000601091 TRAV12-3A0A0B4J271 114 aa7.95□□□□□ -1.14
LIG1-220ENST00000601091 SLC25A20O43772 301 aa7.95□□□□□ -1.14
LIG1-220ENST00000601091 LRBAP50851 2863 aa7.95□□□□□ -1.14
LIG1-220ENST00000601091 CSPG4Q6UVK1 2322 aa7.95□□□□□ -1.14
LIG1-220ENST00000601091 IGHG4P01861 327 aa7.95□□□□□ -1.14
LIG1-220ENST00000601091 PRIMA1Q86XR5 153 aa7.95□□□□□ -1.14
LIG1-220ENST00000601091 B4DSR2 109 aa7.95□□□□□ -1.14
LIG1-220ENST00000601091 F8VRH5 84 aa7.95□□□□□ -1.14
LIG1-220ENST00000601091 M0R2P5 195 aa7.95□□□□□ -1.14
LIG1-220ENST00000601091 MPLKIPQ8TAP9 179 aa7.95□□□□□ -1.14
LIG1-220ENST00000601091 RELNP78509 3460 aa7.95□□□□□ -1.14
LIG1-220ENST00000601091 LINC01548A6NM66 108 aa7.94□□□□□ -1.14
LIG1-220ENST00000601091 SYNJ2BPP57105 145 aa7.94□□□□□ -1.14
LIG1-220ENST00000601091 ZZEF1O43149 2961 aa7.94□□□□□ -1.14
LIG1-220ENST00000601091 COX6B1P14854 86 aa7.94□□□□□ -1.14
LIG1-220ENST00000601091 SMCPP49901 116 aaPredicted RBP7.94□□□□□ -1.14
LIG1-220ENST00000601091 EBI3Q14213 229 aa7.94□□□□□ -1.14
LIG1-220ENST00000601091 SS18Q15532 418 aa7.94□□□□□ -1.14
LIG1-220ENST00000601091 TMEM243Q9BU79 118 aa7.94□□□□□ -1.14
LIG1-220ENST00000601091 FAM208BQ5VWN6 2430 aa7.93□□□□□ -1.14
LIG1-220ENST00000601091 DAD1P61803 113 aa7.93□□□□□ -1.14
LIG1-220ENST00000601091 A0A087WWL8 130 aa7.93□□□□□ -1.14
LIG1-220ENST00000601091 MRGPRG-AS1Q2M3A8 158 aa7.93□□□□□ -1.14
LIG1-220ENST00000601091 UBE2E2Q96LR5 201 aa7.93□□□□□ -1.14
LIG1-220ENST00000601091 MSMBP08118 114 aa7.93□□□□□ -1.14
LIG1-220ENST00000601091 C9orf47Q6ZRZ4 202 aa7.93□□□□□ -1.14
LIG1-220ENST00000601091 C5orf56Q8N8D9 126 aa7.93□□□□□ -1.14
LIG1-220ENST00000601091 TRBV25-1A0A075B6N4 114 aa7.92□□□□□ -1.14
LIG1-220ENST00000601091 CACNA1AO00555 2505 aa7.92□□□□□ -1.14
LIG1-220ENST00000601091 COL12A1Q99715 3063 aa7.92□□□□□ -1.14
LIG1-220ENST00000601091 COX6CP09669 75 aa7.92□□□□□ -1.14
LIG1-220ENST00000601091 ZFP2Q6ZN57 461 aa7.92□□□□□ -1.14
LIG1-220ENST00000601091 IGF1P05019 195 aa7.92□□□□□ -1.14
LIG1-220ENST00000601091 MYMXA0A1B0GTQ4 84 aa7.91□□□□□ -1.14
LIG1-220ENST00000601091 H3BT86 120 aa7.91□□□□□ -1.14
LIG1-220ENST00000601091 DSCR9P59020 149 aa7.91□□□□□ -1.14
LIG1-220ENST00000601091 Q8N1Y9 231 aa7.91□□□□□ -1.14
LIG1-220ENST00000601091 SMAD5-AS1Q9Y6J3 95 aa7.91□□□□□ -1.14
LIG1-220ENST00000601091 U3KQK5 164 aa7.91□□□□□ -1.14
LIG1-220ENST00000601091 TNRC18O15417 2968 aaPredicted RBP7.91□□□□□ -1.14
LIG1-220ENST00000601091 IGKV3D-20A0A0C4DH25 116 aa7.91□□□□□ -1.14
LIG1-220ENST00000601091 IGHV7-4-1A0A0J9YVY3 117 aa7.91□□□□□ -1.14
LIG1-220ENST00000601091 H3BUA1 57 aa7.91□□□□□ -1.14
LIG1-220ENST00000601091 ATOX1O00244 68 aa7.91□□□□□ -1.14
LIG1-220ENST00000601091 TIMM17BO60830 172 aa7.91□□□□□ -1.14
LIG1-220ENST00000601091 GAS8-AS1O95177 125 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms