RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 A0A0J9YXV3 536 aa13.83□□□□□ -0.2
ARHGEF1-221ENST00000600387 A0A1W2PPR1 153 aa13.83□□□□□ -0.2
ARHGEF1-221ENST00000600387 IGHV4-39P01824 125 aa13.83□□□□□ -0.2
ARHGEF1-221ENST00000600387 IGHG2P01859 326 aa13.83□□□□□ -0.2
ARHGEF1-221ENST00000600387 ELANEP08246 267 aa13.83□□□□□ -0.2
ARHGEF1-221ENST00000600387 PF4V1P10720 104 aa13.83□□□□□ -0.2
ARHGEF1-221ENST00000600387 TRAV4A0A0B4J268 109 aa13.82□□□□□ -0.2
ARHGEF1-221ENST00000600387 DCANP1Q8TF63 244 aa13.82□□□□□ -0.2
ARHGEF1-221ENST00000600387 K7EMT4 169 aa13.81□□□□□ -0.2
ARHGEF1-221ENST00000600387 SS18L2Q9UHA2 77 aa13.81□□□□□ -0.2
ARHGEF1-221ENST00000600387 TTC28Q96AY4 2481 aa13.81□□□□□ -0.2
ARHGEF1-221ENST00000600387 H3BMM0 161 aa13.81□□□□□ -0.2
ARHGEF1-221ENST00000600387 TRIAP1O43715 76 aa13.81□□□□□ -0.2
ARHGEF1-221ENST00000600387 TTC32Q5I0X7 151 aa13.81□□□□□ -0.2
ARHGEF1-221ENST00000600387 UBE2WQ96B02 151 aa13.81□□□□□ -0.2
ARHGEF1-221ENST00000600387 IGHV3-30-3P0DP02 117 aa13.8□□□□□ -0.2
ARHGEF1-221ENST00000600387 SPTBN1Q01082 2364 aaKnown RBP13.8□□□□□ -0.2
ARHGEF1-221ENST00000600387 IGHV3OR16-10A0A075B7F0 116 aa13.8□□□□□ -0.2
ARHGEF1-221ENST00000600387 TEX49A0A1B0GTD5 131 aa13.8□□□□□ -0.2
ARHGEF1-221ENST00000600387 IFITM1P13164 125 aa13.8□□□□□ -0.2
ARHGEF1-221ENST00000600387 TIMM21Q9BVV7 248 aa13.8□□□□□ -0.2
ARHGEF1-221ENST00000600387 UBTD1Q9HAC8 227 aa13.8□□□□□ -0.2
ARHGEF1-221ENST00000600387 RIF1Q5UIP0 2472 aaKnown RBP13.79□□□□□ -0.2
ARHGEF1-221ENST00000600387 CRLF1O75462 422 aa13.79□□□□□ -0.2
ARHGEF1-221ENST00000600387 BEX4Q9NWD9 120 aaPredicted RBP13.79□□□□□ -0.2
ARHGEF1-221ENST00000600387 PYGO1Q9Y3Y4 419 aa13.79□□□□□ -0.2
ARHGEF1-221ENST00000600387 B5MCH6 92 aa13.79□□□□□ -0.2
ARHGEF1-221ENST00000600387 LITAFQ99732 161 aa13.79□□□□□ -0.2
ARHGEF1-221ENST00000600387 PRRC2AP48634 2157 aaKnown RBP13.79□□□□□ -0.2
ARHGEF1-221ENST00000600387 SPANXDQ9BXN6 97 aa13.78□□□□□ -0.2
ARHGEF1-221ENST00000600387 SPANXCQ9NY87 97 aa13.78□□□□□ -0.2
ARHGEF1-221ENST00000600387 COX6CP09669 75 aa13.78□□□□□ -0.2
ARHGEF1-221ENST00000600387 SPXQ9BT56 116 aa13.78□□□□□ -0.2
ARHGEF1-221ENST00000600387 ICOSQ9Y6W8 199 aa13.78□□□□□ -0.2
ARHGEF1-221ENST00000600387 IGHV1OR15-1A0A075B7D0 117 aa13.77□□□□□ -0.21
ARHGEF1-221ENST00000600387 IGLV1-40P01703 118 aa13.77□□□□□ -0.21
ARHGEF1-221ENST00000600387 MRPS36P82909 103 aaKnown RBP13.77□□□□□ -0.21
ARHGEF1-221ENST00000600387 C2orf82Q6UX34 121 aa13.77□□□□□ -0.21
ARHGEF1-221ENST00000600387 BRD3OSQ6XYD6 125 aa13.77□□□□□ -0.21
ARHGEF1-221ENST00000600387 ZNF580Q9UK33 172 aa13.77□□□□□ -0.21
ARHGEF1-221ENST00000600387 GAGE12JA6NER3 117 aa13.76□□□□□ -0.21
ARHGEF1-221ENST00000600387 H3BT86 120 aa13.76□□□□□ -0.21
ARHGEF1-221ENST00000600387 GAGE7O76087 117 aa13.76□□□□□ -0.21
ARHGEF1-221ENST00000600387 GAGE12FP0CL80 117 aa13.76□□□□□ -0.21
ARHGEF1-221ENST00000600387 GAGE12GP0CL81 117 aa13.76□□□□□ -0.21
ARHGEF1-221ENST00000600387 GAGE12IP0CL82 117 aa13.76□□□□□ -0.21
ARHGEF1-221ENST00000600387 GAGE4Q13068 117 aa13.76□□□□□ -0.21
ARHGEF1-221ENST00000600387 PTPRQQ9UMZ3 2332 aa13.76□□□□□ -0.21
ARHGEF1-221ENST00000600387 MRPL23Q16540 153 aaKnown RBP13.76□□□□□ -0.21
ARHGEF1-221ENST00000600387 LY6EQ16553 131 aa13.76□□□□□ -0.21
ARHGEF1-221ENST00000600387 C15orf53Q8NAA6 179 aa13.76□□□□□ -0.21
ARHGEF1-221ENST00000600387 TRAV12-2A0A075B6T6 113 aa13.75□□□□□ -0.21
ARHGEF1-221ENST00000600387 PRSS2P07478 247 aa13.75□□□□□ -0.21
ARHGEF1-221ENST00000600387 CD28P10747 220 aa13.75□□□□□ -0.21
ARHGEF1-221ENST00000600387 SVEP1Q4LDE5 3571 aa13.75□□□□□ -0.21
ARHGEF1-221ENST00000600387 IGHV1-58A0A0C4DH39 117 aa13.75□□□□□ -0.21
ARHGEF1-221ENST00000600387 EDN2P20800 178 aa13.75□□□□□ -0.21
ARHGEF1-221ENST00000600387 SPANXA1Q9NS26 97 aa13.75□□□□□ -0.21
ARHGEF1-221ENST00000600387 A6NDX4 124 aa13.74□□□□□ -0.21
ARHGEF1-221ENST00000600387 H7C423 109 aa13.74□□□□□ -0.21
ARHGEF1-221ENST00000600387 KLRB1Q12918 225 aa13.74□□□□□ -0.21
ARHGEF1-221ENST00000600387 FOXC1Q12948 553 aa13.74□□□□□ -0.21
ARHGEF1-221ENST00000600387 EDA2RQ9HAV5 297 aa13.74□□□□□ -0.21
ARHGEF1-221ENST00000600387 SNRPD3P62318 126 aaKnown RBP13.74□□□□□ -0.21
ARHGEF1-221ENST00000600387 ADARB2-AS1A8MUL3 147 aa13.73□□□□□ -0.21
ARHGEF1-221ENST00000600387 MIAQ16674 131 aa13.73□□□□□ -0.21
ARHGEF1-221ENST00000600387 NDUFA12Q9UI09 145 aa13.73□□□□□ -0.21
ARHGEF1-221ENST00000600387 H3BUX3 64 aa13.73□□□□□ -0.21
ARHGEF1-221ENST00000600387 ASH1LQ9NR48 2969 aaKnown RBP13.72□□□□□ -0.21
ARHGEF1-221ENST00000600387 TRGV11A0A075B6L2 103 aa13.72□□□□□ -0.21
ARHGEF1-221ENST00000600387 IGKV3-20P01619 116 aa13.72□□□□□ -0.21
ARHGEF1-221ENST00000600387 YAE1D1Q9NRH1 226 aa13.72□□□□□ -0.21
ARHGEF1-221ENST00000600387 TRAV8-3A0A0A6YYJ7 113 aa13.71□□□□□ -0.21
ARHGEF1-221ENST00000600387 FAM240AA0A1B0GVK7 77 aa13.71□□□□□ -0.21
ARHGEF1-221ENST00000600387 BLCAPP62952 87 aa13.71□□□□□ -0.21
ARHGEF1-221ENST00000600387 ADAMTSL4-AS1Q5T5F5 129 aa13.71□□□□□ -0.21
ARHGEF1-221ENST00000600387 FAM104AQ969W3 186 aa13.71□□□□□ -0.21
ARHGEF1-221ENST00000600387 CCDC179H3BU77 68 aa13.7□□□□□ -0.22
ARHGEF1-221ENST00000600387 CFHR3Q02985 330 aa13.7□□□□□ -0.22
ARHGEF1-221ENST00000600387 SPINK13Q1W4C9 94 aa13.7□□□□□ -0.22
ARHGEF1-221ENST00000600387 DEFB121Q5J5C9 76 aa13.7□□□□□ -0.22
ARHGEF1-221ENST00000600387 VSIG2Q96IQ7 327 aa13.7□□□□□ -0.22
ARHGEF1-221ENST00000600387 TINCRA0A1B0GVN0 87 aa13.7□□□□□ -0.22
ARHGEF1-221ENST00000600387 SPTA1P02549 2419 aa13.7□□□□□ -0.22
ARHGEF1-221ENST00000600387 PTPRZ1P23471 2315 aaPredicted RBP13.7□□□□□ -0.22
ARHGEF1-221ENST00000600387 RELNP78509 3460 aa13.69□□□□□ -0.22
ARHGEF1-221ENST00000600387 ZFHX2Q9C0A1 2572 aaPredicted RBP13.69□□□□□ -0.22
ARHGEF1-221ENST00000600387 LST1O00453 97 aa13.69□□□□□ -0.22
ARHGEF1-221ENST00000600387 ABCA2Q9BZC7 2435 aa13.69□□□□□ -0.22
ARHGEF1-221ENST00000600387 K7EQG2 157 aa13.69□□□□□ -0.22
ARHGEF1-221ENST00000600387 TIMM17BO60830 172 aa13.68□□□□□ -0.22
ARHGEF1-221ENST00000600387 IGHV4-38-2P0DP08 117 aa13.68□□□□□ -0.22
ARHGEF1-221ENST00000600387 TMEM61Q8N0U2 210 aa13.68□□□□□ -0.22
ARHGEF1-221ENST00000600387 RNF152Q8N8N0 203 aa13.68□□□□□ -0.22
ARHGEF1-221ENST00000600387 ZFHX3Q15911 3703 aa13.68□□□□□ -0.22
ARHGEF1-221ENST00000600387 NBL1P41271 181 aa13.66□□□□□ -0.22
ARHGEF1-221ENST00000600387 CLEC2BQ92478 149 aa13.66□□□□□ -0.22
ARHGEF1-221ENST00000600387 TNFRSF18Q9Y5U5 241 aa13.66□□□□□ -0.22
ARHGEF1-221ENST00000600387 COL6A6A6NMZ7 2263 aa13.66□□□□□ -0.22
ARHGEF1-221ENST00000600387 NBASA2RRP1 2371 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms