RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 KIF25-AS1Q9Y6Z4 181 aa10.42□□□□□ -0.74
VRK3-221ENST00000600284 MUC21A0A0G2JKD1 596 aa10.41□□□□□ -0.74
VRK3-221ENST00000600284 MUC21A0A140T8X8 626 aa10.41□□□□□ -0.74
VRK3-221ENST00000600284 RBFOX3A6NFN3 312 aa10.41□□□□□ -0.74
VRK3-221ENST00000600284 TMEM262E9PQX1 116 aa10.41□□□□□ -0.74
VRK3-221ENST00000600284 LECT2O14960 151 aa10.41□□□□□ -0.74
VRK3-221ENST00000600284 IGLV2-8P01709 118 aa10.41□□□□□ -0.74
VRK3-221ENST00000600284 CENPWQ5EE01 88 aa10.41□□□□□ -0.74
VRK3-221ENST00000600284 Q6ZSA8 131 aa10.41□□□□□ -0.74
VRK3-221ENST00000600284 VAX2Q9UIW0 290 aa10.41□□□□□ -0.74
VRK3-221ENST00000600284 C19orf71A6NCJ1 209 aa10.4□□□□□ -0.74
VRK3-221ENST00000600284 IFNA1P01562 189 aa10.4□□□□□ -0.74
VRK3-221ENST00000600284 IGLC6P0CF74 106 aa10.4□□□□□ -0.74
VRK3-221ENST00000600284 GNG4P50150 75 aa10.4□□□□□ -0.74
VRK3-221ENST00000600284 MEF2BQ02080 365 aaPredicted RBP10.4□□□□□ -0.74
VRK3-221ENST00000600284 BIN3Q9NQY0 253 aa10.4□□□□□ -0.74
VRK3-221ENST00000600284 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.39□□□□□ -0.75
VRK3-221ENST00000600284 XKRY2A2RUG3 117 aa10.39□□□□□ -0.75
VRK3-221ENST00000600284 CACNG7P62955 275 aa10.39□□□□□ -0.75
VRK3-221ENST00000600284 HAMPP81172 84 aa10.39□□□□□ -0.75
VRK3-221ENST00000600284 SLC51BQ86UW2 128 aa10.39□□□□□ -0.75
VRK3-221ENST00000600284 FER1L6-AS1Q8NA97 138 aa10.39□□□□□ -0.75
VRK3-221ENST00000600284 OR2D3Q8NGH3 330 aa10.39□□□□□ -0.75
VRK3-221ENST00000600284 DNAJC30Q96LL9 226 aa10.39□□□□□ -0.75
VRK3-221ENST00000600284 RAB19A4D1S5 217 aa10.38□□□□□ -0.75
VRK3-221ENST00000600284 F2Z2F3 143 aa10.38□□□□□ -0.75
VRK3-221ENST00000600284 TAGLN2P37802 199 aaKnown RBP10.38□□□□□ -0.75
VRK3-221ENST00000600284 SSTP61278 116 aa10.38□□□□□ -0.75
VRK3-221ENST00000600284 ENHOQ6UWT2 76 aa10.38□□□□□ -0.75
VRK3-221ENST00000600284 C1orf43Q9BWL3 253 aa10.38□□□□□ -0.75
VRK3-221ENST00000600284 MED9Q9NWA0 146 aa10.38□□□□□ -0.75
VRK3-221ENST00000600284 H7C1H1 209 aa10.37□□□□□ -0.75
VRK3-221ENST00000600284 P01737 135 aa10.37□□□□□ -0.75
VRK3-221ENST00000600284 CRPP02741 224 aa10.37□□□□□ -0.75
VRK3-221ENST00000600284 BCL2P10415 239 aa10.37□□□□□ -0.75
VRK3-221ENST00000600284 C14orf177Q52M58 125 aa10.37□□□□□ -0.75
VRK3-221ENST00000600284 MPV17L2Q567V2 206 aa10.37□□□□□ -0.75
VRK3-221ENST00000600284 NTM-AS1Q6ZSK4 140 aa10.37□□□□□ -0.75
VRK3-221ENST00000600284 CHCHD5Q9BSY4 110 aa10.37□□□□□ -0.75
VRK3-221ENST00000600284 M0QY20 66 aa10.36□□□□□ -0.75
VRK3-221ENST00000600284 ANGP03950 147 aaKnown RBP10.36□□□□□ -0.75
VRK3-221ENST00000600284 GZMBP10144 247 aa10.36□□□□□ -0.75
VRK3-221ENST00000600284 C15orf54Q8N8G6 183 aa10.36□□□□□ -0.75
VRK3-221ENST00000600284 TPPP3Q9BW30 176 aa10.36□□□□□ -0.75
VRK3-221ENST00000600284 TRBV25-1A0A075B6N4 114 aa10.35□□□□□ -0.75
VRK3-221ENST00000600284 MIAQ16674 131 aa10.35□□□□□ -0.75
VRK3-221ENST00000600284 WDR73Q6P4I2 378 aa10.35□□□□□ -0.75
VRK3-221ENST00000600284 TRBV20OR9-2A0A075B6H5 130 aa10.34□□□□□ -0.75
VRK3-221ENST00000600284 TRGC1P0CF51 173 aa10.34□□□□□ -0.75
VRK3-221ENST00000600284 IQCJQ1A5X6 159 aa10.34□□□□□ -0.75
VRK3-221ENST00000600284 C9orf62Q8N4C0 152 aa10.34□□□□□ -0.75
VRK3-221ENST00000600284 PRR34Q9NV39 138 aa10.34□□□□□ -0.75
VRK3-221ENST00000600284 HERC1Q15751 4861 aa10.33□□□□□ -0.76
VRK3-221ENST00000600284 IGHV1-24A0A0C4DH33 117 aa10.33□□□□□ -0.76
VRK3-221ENST00000600284 PLA2G1BP04054 148 aaKnown RBP10.33□□□□□ -0.76
VRK3-221ENST00000600284 MGPP08493 103 aa10.33□□□□□ -0.76
VRK3-221ENST00000600284 SUMO4Q6EEV6 95 aa10.33□□□□□ -0.76
VRK3-221ENST00000600284 LYZL1Q6UWQ5 148 aa10.33□□□□□ -0.76
VRK3-221ENST00000600284 SRRM2Q9UQ35 2752 aaKnown RBP10.33□□□□□ -0.76
VRK3-221ENST00000600284 RBX1P62877 108 aa10.32□□□□□ -0.76
VRK3-221ENST00000600284 RASL11AQ6T310 242 aa10.32□□□□□ -0.76
VRK3-221ENST00000600284 Q6ZNX1 250 aa10.32□□□□□ -0.76
VRK3-221ENST00000600284 NUDT10Q8NFP7 164 aa10.32□□□□□ -0.76
VRK3-221ENST00000600284 NUDT11Q96G61 164 aa10.32□□□□□ -0.76
VRK3-221ENST00000600284 DPH3P1Q9H4G8 78 aa10.32□□□□□ -0.76
VRK3-221ENST00000600284 NTF3P20783 257 aa10.31□□□□□ -0.76
VRK3-221ENST00000600284 LINC01620Q4KN68 170 aa10.31□□□□□ -0.76
VRK3-221ENST00000600284 CNFNQ9BYD5 112 aa10.31□□□□□ -0.76
VRK3-221ENST00000600284 NIT2Q9NQR4 276 aa10.31□□□□□ -0.76
VRK3-221ENST00000600284 CTRLP40313 264 aa10.3□□□□□ -0.76
VRK3-221ENST00000600284 GAGE6Q13070 117 aa10.3□□□□□ -0.76
VRK3-221ENST00000600284 LINC00528Q8N1L1 170 aa10.3□□□□□ -0.76
VRK3-221ENST00000600284 LINC00269Q8N2A0 174 aa10.3□□□□□ -0.76
VRK3-221ENST00000600284 PGLYRP4Q96LB8 373 aa10.3□□□□□ -0.76
VRK3-221ENST00000600284 CHAC1Q9BUX1 264 aa10.3□□□□□ -0.76
VRK3-221ENST00000600284 MYCBP2O75592 4640 aa10.29□□□□□ -0.76
VRK3-221ENST00000600284 A0A1B0GUV1 79 aa10.29□□□□□ -0.76
VRK3-221ENST00000600284 USP17L23D6RBM5 183 aa10.29□□□□□ -0.76
VRK3-221ENST00000600284 NKX2-5P52952 324 aaPredicted RBP10.29□□□□□ -0.76
VRK3-221ENST00000600284 BLOC1S1P78537 153 aa10.29□□□□□ -0.76
VRK3-221ENST00000600284 DGAT2L7PQ6IED9 249 aa10.29□□□□□ -0.76
VRK3-221ENST00000600284 SCXQ7RTU7 201 aa10.29□□□□□ -0.76
VRK3-221ENST00000600284 TMEM250H0YL14 139 aa10.28□□□□□ -0.76
VRK3-221ENST00000600284 AKAP14Q86UN6 197 aa10.28□□□□□ -0.76
VRK3-221ENST00000600284 OCC1Q8TAD7 63 aa10.28□□□□□ -0.76
VRK3-221ENST00000600284 RPP21Q9H633 154 aaKnown RBP10.28□□□□□ -0.76
VRK3-221ENST00000600284 TRAV8-4A0A0B4J246 113 aa10.27□□□□□ -0.77
VRK3-221ENST00000600284 K7EN84 100 aa10.27□□□□□ -0.77
VRK3-221ENST00000600284 HLA-DQA1P01909 254 aa10.27□□□□□ -0.77
VRK3-221ENST00000600284 REG3AQ06141 175 aa10.27□□□□□ -0.77
VRK3-221ENST00000600284 TWIST1Q15672 202 aa10.27□□□□□ -0.77
VRK3-221ENST00000600284 KRTAP26-1Q6PEX3 210 aa10.27□□□□□ -0.77
VRK3-221ENST00000600284 TMEM243Q9BU79 118 aa10.27□□□□□ -0.77
VRK3-221ENST00000600284 DMBT1Q9UGM3 2413 aaPredicted RBP10.27□□□□□ -0.77
VRK3-221ENST00000600284 CLRN3Q8NCR9 226 aa10.26□□□□□ -0.77
VRK3-221ENST00000600284 LYPD6BQ8NI32 183 aa10.26□□□□□ -0.77
VRK3-221ENST00000600284 RNASE7Q9H1E1 156 aaKnown RBP10.26□□□□□ -0.77
VRK3-221ENST00000600284 FLG2Q5D862 2391 aaPredicted RBP10.26□□□□□ -0.77
VRK3-221ENST00000600284 PRSS1P07477 247 aa10.25□□□□□ -0.77
VRK3-221ENST00000600284 COTL1Q14019 142 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms