RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 GAGE7O76087 117 aa14.4□□□□□ -0.1
ARHGEF1-218ENST00000599589 GAGE12FP0CL80 117 aa14.4□□□□□ -0.1
ARHGEF1-218ENST00000599589 GAGE12GP0CL81 117 aa14.4□□□□□ -0.1
ARHGEF1-218ENST00000599589 GAGE12IP0CL82 117 aa14.4□□□□□ -0.1
ARHGEF1-218ENST00000599589 UBE2E1P51965 193 aa14.4□□□□□ -0.1
ARHGEF1-218ENST00000599589 GAGE4Q13068 117 aa14.4□□□□□ -0.1
ARHGEF1-218ENST00000599589 TMEM219Q86XT9 240 aa14.4□□□□□ -0.1
ARHGEF1-218ENST00000599589 ODF3Q96PU9 254 aa14.4□□□□□ -0.1
ARHGEF1-218ENST00000599589 ZNF580Q9UK33 172 aa14.4□□□□□ -0.1
ARHGEF1-218ENST00000599589 FAM159AQ6UWV7 190 aa14.39□□□□□ -0.11
ARHGEF1-218ENST00000599589 C5orf56Q8N8D9 126 aa14.39□□□□□ -0.11
ARHGEF1-218ENST00000599589 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.39□□□□□ -0.11
ARHGEF1-218ENST00000599589 PKD1L2Q7Z442 2459 aa14.38□□□□□ -0.11
ARHGEF1-218ENST00000599589 TRAV41A0A0B4J266 112 aa14.38□□□□□ -0.11
ARHGEF1-218ENST00000599589 ZNF22P17026 224 aaPredicted RBP14.38□□□□□ -0.11
ARHGEF1-218ENST00000599589 C15orf53Q8NAA6 179 aa14.38□□□□□ -0.11
ARHGEF1-218ENST00000599589 TRIAP1O43715 76 aa14.38□□□□□ -0.11
ARHGEF1-218ENST00000599589 CACNA1AO00555 2505 aa14.37□□□□□ -0.11
ARHGEF1-218ENST00000599589 RPL13AP40429 203 aaKnown RBP14.37□□□□□ -0.11
ARHGEF1-218ENST00000599589 TRBV10-2A0A0K0K1G8 114 aa14.37□□□□□ -0.11
ARHGEF1-218ENST00000599589 FAM223BA6NKX1 122 aa14.37□□□□□ -0.11
ARHGEF1-218ENST00000599589 M0R2P5 195 aa14.37□□□□□ -0.11
ARHGEF1-218ENST00000599589 FAM223AQ8IWN6 122 aa14.37□□□□□ -0.11
ARHGEF1-218ENST00000599589 A0A0J9YXV3 536 aa14.36□□□□□ -0.11
ARHGEF1-218ENST00000599589 H3BMM0 161 aa14.36□□□□□ -0.11
ARHGEF1-218ENST00000599589 IGHV1-69P01742 117 aa14.36□□□□□ -0.11
ARHGEF1-218ENST00000599589 Q6Q795 121 aa14.36□□□□□ -0.11
ARHGEF1-218ENST00000599589 UBE2WQ96B02 151 aa14.36□□□□□ -0.11
ARHGEF1-218ENST00000599589 ADARB2-AS1A8MUL3 147 aa14.36□□□□□ -0.11
ARHGEF1-218ENST00000599589 LGALS9O00182 355 aa14.36□□□□□ -0.11
ARHGEF1-218ENST00000599589 NDUFA4O00483 81 aa14.36□□□□□ -0.11
ARHGEF1-218ENST00000599589 A0A0J9YXY3 114 aa14.35□□□□□ -0.11
ARHGEF1-218ENST00000599589 TRBV6-5A0A0K0K1A5 114 aa14.35□□□□□ -0.11
ARHGEF1-218ENST00000599589 ZNF56Q15929 161 aa14.35□□□□□ -0.11
ARHGEF1-218ENST00000599589 TRAV12-3A0A0B4J271 114 aa14.34□□□□□ -0.11
ARHGEF1-218ENST00000599589 TRBV30A0A0K0K1B3 111 aa14.34□□□□□ -0.11
ARHGEF1-218ENST00000599589 KLLNB2CW77 178 aa14.34□□□□□ -0.11
ARHGEF1-218ENST00000599589 TRBV7-9A0A0J9YWB2 115 aa14.34□□□□□ -0.11
ARHGEF1-218ENST00000599589 IGHV3-11P01762 117 aa14.34□□□□□ -0.11
ARHGEF1-218ENST00000599589 NSUN5P1Q3KNT7 163 aa14.34□□□□□ -0.11
ARHGEF1-218ENST00000599589 C2orf82Q6UX34 121 aa14.33□□□□□ -0.11
ARHGEF1-218ENST00000599589 LINC01600Q96MT4 127 aa14.33□□□□□ -0.11
ARHGEF1-218ENST00000599589 C19orf54Q5BKX5 351 aa14.32□□□□□ -0.12
ARHGEF1-218ENST00000599589 A0A0J9YX75 114 aa14.32□□□□□ -0.12
ARHGEF1-218ENST00000599589 M0QY20 66 aa14.32□□□□□ -0.12
ARHGEF1-218ENST00000599589 NPFFO15130 113 aa14.31□□□□□ -0.12
ARHGEF1-218ENST00000599589 PRSS2P07478 247 aa14.31□□□□□ -0.12
ARHGEF1-218ENST00000599589 RHOHQ15669 191 aa14.31□□□□□ -0.12
ARHGEF1-218ENST00000599589 SPXQ9BT56 116 aa14.31□□□□□ -0.12
ARHGEF1-218ENST00000599589 RHPN1-AS1Q9BWJ2 59 aa14.31□□□□□ -0.12
ARHGEF1-218ENST00000599589 H7C423 109 aa14.31□□□□□ -0.12
ARHGEF1-218ENST00000599589 CCL19Q99731 98 aa14.31□□□□□ -0.12
ARHGEF1-218ENST00000599589 MDFICQ9P1T7 246 aa14.31□□□□□ -0.12
ARHGEF1-218ENST00000599589 IGLV4-3A0A075B6K6 122 aa14.3□□□□□ -0.12
ARHGEF1-218ENST00000599589 IGHV3-30-3P0DP02 117 aa14.3□□□□□ -0.12
ARHGEF1-218ENST00000599589 C20orf203Q8NBC4 194 aa14.3□□□□□ -0.12
ARHGEF1-218ENST00000599589 ICOSQ9Y6W8 199 aa14.3□□□□□ -0.12
ARHGEF1-218ENST00000599589 LITAFQ99732 161 aa14.3□□□□□ -0.12
ARHGEF1-218ENST00000599589 PIMREGQ9BSJ6 248 aa14.3□□□□□ -0.12
ARHGEF1-218ENST00000599589 PRRC2AP48634 2157 aaKnown RBP14.3□□□□□ -0.12
ARHGEF1-218ENST00000599589 Q6ZSV7 163 aa14.29□□□□□ -0.12
ARHGEF1-218ENST00000599589 SMIM20Q8N5G0 67 aa14.29□□□□□ -0.12
ARHGEF1-218ENST00000599589 MOB4Q9Y3A3 225 aa14.29□□□□□ -0.12
ARHGEF1-218ENST00000599589 AKAP6Q13023 2319 aa14.29□□□□□ -0.12
ARHGEF1-218ENST00000599589 IGHV3OR16-10A0A075B7F0 116 aa14.28□□□□□ -0.12
ARHGEF1-218ENST00000599589 EDN2P20800 178 aa14.28□□□□□ -0.12
ARHGEF1-218ENST00000599589 ADAMTSL4-AS1Q5T5F5 129 aa14.28□□□□□ -0.12
ARHGEF1-218ENST00000599589 TRAV8-3A0A0A6YYJ7 113 aa14.28□□□□□ -0.12
ARHGEF1-218ENST00000599589 NPC2P61916 151 aa14.28□□□□□ -0.12
ARHGEF1-218ENST00000599589 CLEC2BQ92478 149 aa14.28□□□□□ -0.12
ARHGEF1-218ENST00000599589 TIMM21Q9BVV7 248 aa14.28□□□□□ -0.12
ARHGEF1-218ENST00000599589 IGHV3-16A0A0C4DH30 117 aa14.27□□□□□ -0.13
ARHGEF1-218ENST00000599589 C9orf85Q96MD7 179 aa14.27□□□□□ -0.13
ARHGEF1-218ENST00000599589 HERV-K104P63124 156 aa14.27□□□□□ -0.13
ARHGEF1-218ENST00000599589 C10orf105Q8TEF2 133 aa14.27□□□□□ -0.13
ARHGEF1-218ENST00000599589 DUX3Q96PT4 197 aa14.27□□□□□ -0.13
ARHGEF1-218ENST00000599589 TRAV12-2A0A075B6T6 113 aa14.26□□□□□ -0.13
ARHGEF1-218ENST00000599589 IGHV4-61A0A0C4DH41 118 aa14.26□□□□□ -0.13
ARHGEF1-218ENST00000599589 I3L3M4 83 aa14.26□□□□□ -0.13
ARHGEF1-218ENST00000599589 FAM110AQ9BQ89 295 aa14.26□□□□□ -0.13
ARHGEF1-218ENST00000599589 SHISA2Q6UWI4 295 aa14.25□□□□□ -0.13
ARHGEF1-218ENST00000599589 H3BT86 120 aa14.25□□□□□ -0.13
ARHGEF1-218ENST00000599589 IGKV3-20P01619 116 aa14.25□□□□□ -0.13
ARHGEF1-218ENST00000599589 CELSR1Q9NYQ6 3014 aa14.24□□□□□ -0.13
ARHGEF1-218ENST00000599589 COX6CP09669 75 aa14.24□□□□□ -0.13
ARHGEF1-218ENST00000599589 ATP5J2P56134 94 aa14.24□□□□□ -0.13
ARHGEF1-218ENST00000599589 MEIG1Q5JSS6 88 aa14.24□□□□□ -0.13
ARHGEF1-218ENST00000599589 CD28P10747 220 aa14.23□□□□□ -0.13
ARHGEF1-218ENST00000599589 PF4V1P10720 104 aa14.23□□□□□ -0.13
ARHGEF1-218ENST00000599589 RNASE13Q5GAN3 156 aaKnown RBP14.23□□□□□ -0.13
ARHGEF1-218ENST00000599589 CEMP1Q6PRD7 247 aaPredicted RBP14.23□□□□□ -0.13
ARHGEF1-218ENST00000599589 SPTAN1Q13813 2472 aaKnown RBP14.22□□□□□ -0.13
ARHGEF1-218ENST00000599589 A8MZ25 164 aa14.22□□□□□ -0.13
ARHGEF1-218ENST00000599589 CHCHD5Q9BSY4 110 aa14.22□□□□□ -0.13
ARHGEF1-218ENST00000599589 SPANXDQ9BXN6 97 aa14.22□□□□□ -0.13
ARHGEF1-218ENST00000599589 DAZ1Q9NQZ3 744 aaKnown RBP14.22□□□□□ -0.13
ARHGEF1-218ENST00000599589 SPANXCQ9NY87 97 aa14.22□□□□□ -0.13
ARHGEF1-218ENST00000599589 NDUFA12Q9UI09 145 aa14.22□□□□□ -0.13
ARHGEF1-218ENST00000599589 ID1P41134 155 aa14.22□□□□□ -0.13
ARHGEF1-218ENST00000599589 MRPL23Q16540 153 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 163.2 ms