RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 F5H697 171 aa6.81□□□□□ -1.32
LSM4-205ENST00000597776 SNAI2O43623 268 aa6.81□□□□□ -1.32
LSM4-205ENST00000597776 PRSS1P07477 247 aa6.81□□□□□ -1.32
LSM4-205ENST00000597776 CXCL1P09341 107 aa6.81□□□□□ -1.32
LSM4-205ENST00000597776 SPANXN1Q5VSR9 72 aa6.81□□□□□ -1.32
LSM4-205ENST00000597776 BAGE2Q86Y30 109 aa6.81□□□□□ -1.32
LSM4-205ENST00000597776 PFDN1O60925 122 aa6.8□□□□□ -1.32
LSM4-205ENST00000597776 S100A9P06702 114 aaKnown RBP6.8□□□□□ -1.32
LSM4-205ENST00000597776 OR5AL1P0C617 328 aa6.8□□□□□ -1.32
LSM4-205ENST00000597776 RPL37AP61513 92 aaKnown RBP6.8□□□□□ -1.32
LSM4-205ENST00000597776 RBX1P62877 108 aa6.8□□□□□ -1.32
LSM4-205ENST00000597776 GAGE6Q13070 117 aa6.8□□□□□ -1.32
LSM4-205ENST00000597776 MBD3L1Q8WWY6 194 aa6.8□□□□□ -1.32
LSM4-205ENST00000597776 SSBP4Q9BWG4 385 aaPredicted RBP6.8□□□□□ -1.32
LSM4-205ENST00000597776 PANO1I0J062 215 aa6.79□□□□□ -1.32
LSM4-205ENST00000597776 OXTP01178 125 aa6.79□□□□□ -1.32
LSM4-205ENST00000597776 HNRNPA3P51991 378 aaKnown RBP6.79□□□□□ -1.32
LSM4-205ENST00000597776 MIAQ16674 131 aa6.79□□□□□ -1.32
LSM4-205ENST00000597776 KRTAP26-1Q6PEX3 210 aa6.79□□□□□ -1.32
LSM4-205ENST00000597776 LINC00269Q8N2A0 174 aa6.79□□□□□ -1.32
LSM4-205ENST00000597776 KCNRGQ8N5I3 272 aa6.79□□□□□ -1.32
LSM4-205ENST00000597776 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.79□□□□□ -1.32
LSM4-205ENST00000597776 DERL1Q9BUN8 251 aa6.79□□□□□ -1.32
LSM4-205ENST00000597776 PRR34Q9NV39 138 aa6.79□□□□□ -1.32
LSM4-205ENST00000597776 VAX2Q9UIW0 290 aa6.79□□□□□ -1.32
LSM4-205ENST00000597776 KIF25-AS1Q9Y6Z4 181 aa6.79□□□□□ -1.32
LSM4-205ENST00000597776 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.79□□□□□ -1.32
LSM4-205ENST00000597776 UMAD1C9J7I0 102 aa6.78□□□□□ -1.32
LSM4-205ENST00000597776 MGPP08493 103 aa6.78□□□□□ -1.32
LSM4-205ENST00000597776 SMIM17P0DL12 118 aa6.78□□□□□ -1.32
LSM4-205ENST00000597776 GZMBP10144 247 aa6.78□□□□□ -1.32
LSM4-205ENST00000597776 RPL35P42766 123 aaKnown RBP6.78□□□□□ -1.32
LSM4-205ENST00000597776 PKIAP61925 76 aa6.78□□□□□ -1.32
LSM4-205ENST00000597776 SERTAD4-AS1Q5TG53 156 aa6.78□□□□□ -1.32
LSM4-205ENST00000597776 TMUB2Q71RG4 321 aa6.78□□□□□ -1.32
LSM4-205ENST00000597776 AP1S3Q96PC3 154 aa6.78□□□□□ -1.32
LSM4-205ENST00000597776 TPPP3Q9BW30 176 aa6.78□□□□□ -1.32
LSM4-205ENST00000597776 IGLV10-54A0A075B6I4 117 aa6.77□□□□□ -1.33
LSM4-205ENST00000597776 TRBV25-1A0A075B6N4 114 aa6.77□□□□□ -1.33
LSM4-205ENST00000597776 ZNF345Q14585 488 aa6.77□□□□□ -1.33
LSM4-205ENST00000597776 RGS21Q2M5E4 152 aa6.77□□□□□ -1.33
LSM4-205ENST00000597776 TMEM97Q5BJF2 176 aa6.77□□□□□ -1.33
LSM4-205ENST00000597776 C9orf163Q8N9P6 203 aa6.77□□□□□ -1.33
LSM4-205ENST00000597776 DAZAP1Q96EP5 407 aaKnown RBP6.77□□□□□ -1.33
LSM4-205ENST00000597776 IGHV1-24A0A0C4DH33 117 aa6.76□□□□□ -1.33
LSM4-205ENST00000597776 M0QY20 66 aa6.76□□□□□ -1.33
LSM4-205ENST00000597776 H2AFB1P0C5Y9 115 aa6.76□□□□□ -1.33
LSM4-205ENST00000597776 CCL20P78556 96 aa6.76□□□□□ -1.33
LSM4-205ENST00000597776 IQCJQ1A5X6 159 aa6.76□□□□□ -1.33
LSM4-205ENST00000597776 CENPWQ5EE01 88 aa6.76□□□□□ -1.33
LSM4-205ENST00000597776 SUMO4Q6EEV6 95 aa6.76□□□□□ -1.33
LSM4-205ENST00000597776 DGAT2L7PQ6IED9 249 aa6.76□□□□□ -1.33
LSM4-205ENST00000597776 GNG13Q9P2W3 67 aa6.76□□□□□ -1.33
LSM4-205ENST00000597776 KANTRA0A1W2PQU2 76 aa6.75□□□□□ -1.33
LSM4-205ENST00000597776 BCL2L11O43521 198 aa6.75□□□□□ -1.33
LSM4-205ENST00000597776 IGLC6P0CF74 106 aa6.75□□□□□ -1.33
LSM4-205ENST00000597776 NKX2-5P52952 324 aaPredicted RBP6.75□□□□□ -1.33
LSM4-205ENST00000597776 REG3AQ06141 175 aa6.75□□□□□ -1.33
LSM4-205ENST00000597776 SDIM1Q6ZPB5 146 aa6.75□□□□□ -1.33
LSM4-205ENST00000597776 FER1L6-AS1Q8NA97 138 aa6.75□□□□□ -1.33
LSM4-205ENST00000597776 C20orf203Q8NBC4 194 aa6.75□□□□□ -1.33
LSM4-205ENST00000597776 OR2D3Q8NGH3 330 aa6.75□□□□□ -1.33
LSM4-205ENST00000597776 C11orf52Q96A22 123 aa6.75□□□□□ -1.33
LSM4-205ENST00000597776 GFRA4Q9GZZ7 299 aa6.75□□□□□ -1.33
LSM4-205ENST00000597776 UBR4Q5T4S7 5183 aa6.75□□□□□ -1.33
LSM4-205ENST00000597776 IGLV4-60A0A075B6I1 120 aa6.74□□□□□ -1.33
LSM4-205ENST00000597776 hDV102S1A0JD36 115 aa6.74□□□□□ -1.33
LSM4-205ENST00000597776 RAB5CP51148 216 aa6.74□□□□□ -1.33
LSM4-205ENST00000597776 PLA2G2DQ9UNK4 145 aa6.74□□□□□ -1.33
LSM4-205ENST00000597776 A0A0D9SG52 128 aa6.73□□□□□ -1.33
LSM4-205ENST00000597776 RAB19A4D1S5 217 aa6.73□□□□□ -1.33
LSM4-205ENST00000597776 C19orf71A6NCJ1 209 aa6.73□□□□□ -1.33
LSM4-205ENST00000597776 HMSDA8MTL9 139 aa6.73□□□□□ -1.33
LSM4-205ENST00000597776 H7C1H1 209 aa6.73□□□□□ -1.33
LSM4-205ENST00000597776 TMEM243Q9BU79 118 aa6.73□□□□□ -1.33
LSM4-205ENST00000597776 MANBALQ9NQG1 85 aa6.73□□□□□ -1.33
LSM4-205ENST00000597776 SLPIP03973 132 aa6.72□□□□□ -1.33
LSM4-205ENST00000597776 CHTF8P0CG12 524 aa6.72□□□□□ -1.33
LSM4-205ENST00000597776 RPS20P60866 119 aaKnown RBP6.72□□□□□ -1.33
LSM4-205ENST00000597776 CNBPP62633 177 aaKnown RBP6.72□□□□□ -1.33
LSM4-205ENST00000597776 CACNG7P62955 275 aa6.72□□□□□ -1.33
LSM4-205ENST00000597776 RASL11AQ6T310 242 aa6.72□□□□□ -1.33
LSM4-205ENST00000597776 CLRN3Q8NCR9 226 aa6.72□□□□□ -1.33
LSM4-205ENST00000597776 TRBV20OR9-2A0A075B6H5 130 aa6.71□□□□□ -1.34
LSM4-205ENST00000597776 MT1HL1P0DM35 61 aa6.71□□□□□ -1.34
LSM4-205ENST00000597776 GNG4P50150 75 aa6.71□□□□□ -1.34
LSM4-205ENST00000597776 EIF5AP63241 154 aaKnown RBP6.71□□□□□ -1.34
LSM4-205ENST00000597776 CIRBPQ14011 172 aaKnown RBP6.71□□□□□ -1.34
LSM4-205ENST00000597776 LYZL1Q6UWQ5 148 aa6.71□□□□□ -1.34
LSM4-205ENST00000597776 IGHV3-64A0A075B6Q5 118 aa6.7□□□□□ -1.34
LSM4-205ENST00000597776 TRAV8-4A0A0B4J246 113 aa6.7□□□□□ -1.34
LSM4-205ENST00000597776 TRAV1-1A0A0B4J248 108 aa6.7□□□□□ -1.34
LSM4-205ENST00000597776 A0A1B0GUV1 79 aa6.7□□□□□ -1.34
LSM4-205ENST00000597776 IFNA1P01562 189 aa6.7□□□□□ -1.34
LSM4-205ENST00000597776 P01737 135 aa6.7□□□□□ -1.34
LSM4-205ENST00000597776 AMTP48728 403 aa6.7□□□□□ -1.34
LSM4-205ENST00000597776 NIT2Q9NQR4 276 aa6.7□□□□□ -1.34
LSM4-205ENST00000597776 A0A087WYN8 130 aa6.69□□□□□ -1.34
LSM4-205ENST00000597776 XKRY2A2RUG3 117 aa6.69□□□□□ -1.34
LSM4-205ENST00000597776 F2Z2F3 143 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms