RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 CRLF1O75462 422 aa11.61□□□□□ -0.55
IRF3-219ENST00000597636 MUSTN1Q8IVN3 82 aa11.61□□□□□ -0.55
IRF3-219ENST00000597636 TMEM223A0PJW6 202 aa11.61□□□□□ -0.55
IRF3-219ENST00000597636 F5H697 171 aa11.61□□□□□ -0.55
IRF3-219ENST00000597636 DOPEY1Q5JWR5 2465 aa11.61□□□□□ -0.55
IRF3-219ENST00000597636 A0A087WWL8 130 aa11.61□□□□□ -0.55
IRF3-219ENST00000597636 SAA4P35542 130 aa11.61□□□□□ -0.55
IRF3-219ENST00000597636 ATXN8Q156A1 80 aa11.61□□□□□ -0.55
IRF3-219ENST00000597636 LINC01620Q4KN68 170 aa11.61□□□□□ -0.55
IRF3-219ENST00000597636 LINC01600Q96MT4 127 aa11.61□□□□□ -0.55
IRF3-219ENST00000597636 ABCA12Q86UK0 2595 aa11.6□□□□□ -0.55
IRF3-219ENST00000597636 ELANEP08246 267 aa11.6□□□□□ -0.55
IRF3-219ENST00000597636 A0A1W2PPR1 153 aa11.6□□□□□ -0.55
IRF3-219ENST00000597636 FAM223BA6NKX1 122 aa11.6□□□□□ -0.55
IRF3-219ENST00000597636 FAM223AQ8IWN6 122 aa11.6□□□□□ -0.55
IRF3-219ENST00000597636 C5orf56Q8N8D9 126 aa11.6□□□□□ -0.55
IRF3-219ENST00000597636 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.59□□□□□ -0.55
IRF3-219ENST00000597636 TRBV6-5A0A0K0K1A5 114 aa11.59□□□□□ -0.55
IRF3-219ENST00000597636 RPL11P62913 178 aaKnown RBP11.59□□□□□ -0.55
IRF3-219ENST00000597636 C11orf71Q6IPW1 123 aa11.59□□□□□ -0.55
IRF3-219ENST00000597636 FBXL19-AS1Q494R0 122 aa11.59□□□□□ -0.55
IRF3-219ENST00000597636 OPRPNQ99935 248 aaPredicted RBP11.59□□□□□ -0.55
IRF3-219ENST00000597636 TRAV41A0A0B4J266 112 aa11.58□□□□□ -0.56
IRF3-219ENST00000597636 GAGE12JA6NER3 117 aa11.58□□□□□ -0.56
IRF3-219ENST00000597636 NDUFA4O00483 81 aa11.58□□□□□ -0.56
IRF3-219ENST00000597636 GAGE7O76087 117 aa11.58□□□□□ -0.56
IRF3-219ENST00000597636 TRBV12-3P01733 135 aa11.58□□□□□ -0.56
IRF3-219ENST00000597636 IGHV1-69P01742 117 aa11.58□□□□□ -0.56
IRF3-219ENST00000597636 GAGE12FP0CL80 117 aa11.58□□□□□ -0.56
IRF3-219ENST00000597636 GAGE12GP0CL81 117 aa11.58□□□□□ -0.56
IRF3-219ENST00000597636 GAGE12IP0CL82 117 aa11.58□□□□□ -0.56
IRF3-219ENST00000597636 RPL13AP40429 203 aaKnown RBP11.58□□□□□ -0.56
IRF3-219ENST00000597636 GAGE4Q13068 117 aa11.58□□□□□ -0.56
IRF3-219ENST00000597636 Q1RN00 199 aa11.58□□□□□ -0.56
IRF3-219ENST00000597636 TTC32Q5I0X7 151 aa11.58□□□□□ -0.56
IRF3-219ENST00000597636 Q6Q795 121 aa11.58□□□□□ -0.56
IRF3-219ENST00000597636 LINC00527Q9UJ94 153 aa11.58□□□□□ -0.56
IRF3-219ENST00000597636 IFITM1P13164 125 aa11.58□□□□□ -0.56
IRF3-219ENST00000597636 FAM159AQ6UWV7 190 aa11.58□□□□□ -0.56
IRF3-219ENST00000597636 ZNF256Q9Y2P7 627 aaPredicted RBP11.58□□□□□ -0.56
IRF3-219ENST00000597636 LGALS9O00182 355 aa11.57□□□□□ -0.56
IRF3-219ENST00000597636 IGHV4-39P01824 125 aa11.57□□□□□ -0.56
IRF3-219ENST00000597636 PTPN13Q12923 2485 aa11.57□□□□□ -0.56
IRF3-219ENST00000597636 TEX49A0A1B0GTD5 131 aa11.57□□□□□ -0.56
IRF3-219ENST00000597636 ZNF22P17026 224 aaPredicted RBP11.57□□□□□ -0.56
IRF3-219ENST00000597636 C19orf54Q5BKX5 351 aa11.57□□□□□ -0.56
IRF3-219ENST00000597636 ODF3Q96PU9 254 aa11.57□□□□□ -0.56
IRF3-219ENST00000597636 IGHV3-64A0A075B6Q5 118 aa11.57□□□□□ -0.56
IRF3-219ENST00000597636 TRBV10-2A0A0K0K1G8 114 aa11.57□□□□□ -0.56
IRF3-219ENST00000597636 KLLNB2CW77 178 aa11.57□□□□□ -0.56
IRF3-219ENST00000597636 M0R2P5 195 aa11.57□□□□□ -0.56
IRF3-219ENST00000597636 IGKV3-7A0A075B6H7 116 aa11.56□□□□□ -0.56
IRF3-219ENST00000597636 TRAV8-4A0A0B4J246 113 aa11.56□□□□□ -0.56
IRF3-219ENST00000597636 A0A0J9YX75 114 aa11.56□□□□□ -0.56
IRF3-219ENST00000597636 TRBV30A0A0K0K1B3 111 aa11.56□□□□□ -0.56
IRF3-219ENST00000597636 USP9YO00507 2555 aaPredicted RBP11.56□□□□□ -0.56
IRF3-219ENST00000597636 DOPEY2Q9Y3R5 2298 aa11.56□□□□□ -0.56
IRF3-219ENST00000597636 NSUN5P1Q3KNT7 163 aa11.56□□□□□ -0.56
IRF3-219ENST00000597636 CCDC179H3BU77 68 aa11.55□□□□□ -0.56
IRF3-219ENST00000597636 RHOHQ15669 191 aa11.55□□□□□ -0.56
IRF3-219ENST00000597636 TMEM219Q86XT9 240 aa11.55□□□□□ -0.56
IRF3-219ENST00000597636 BEX4Q9NWD9 120 aaPredicted RBP11.55□□□□□ -0.56
IRF3-219ENST00000597636 FAM74A4Q5TZK3 123 aa11.55□□□□□ -0.56
IRF3-219ENST00000597636 A0A0J9YXY3 114 aa11.54□□□□□ -0.56
IRF3-219ENST00000597636 TRIAP1O43715 76 aa11.54□□□□□ -0.56
IRF3-219ENST00000597636 C15orf53Q8NAA6 179 aa11.54□□□□□ -0.56
IRF3-219ENST00000597636 UBTD1Q9HAC8 227 aa11.54□□□□□ -0.56
IRF3-219ENST00000597636 A0A0J9YXV3 536 aa11.53□□□□□ -0.56
IRF3-219ENST00000597636 H3BMM0 161 aa11.53□□□□□ -0.56
IRF3-219ENST00000597636 M0QY20 66 aa11.53□□□□□ -0.56
IRF3-219ENST00000597636 UBE2WQ96B02 151 aa11.53□□□□□ -0.56
IRF3-219ENST00000597636 MDFICQ9P1T7 246 aa11.53□□□□□ -0.56
IRF3-219ENST00000597636 NBPF19A0A087WUL8 3843 aa11.53□□□□□ -0.56
IRF3-219ENST00000597636 NPFFO15130 113 aa11.53□□□□□ -0.56
IRF3-219ENST00000597636 C20orf203Q8NBC4 194 aa11.53□□□□□ -0.56
IRF3-219ENST00000597636 ZNF580Q9UK33 172 aa11.53□□□□□ -0.56
IRF3-219ENST00000597636 RHPN1-AS1Q9BWJ2 59 aa11.52□□□□□ -0.57
IRF3-219ENST00000597636 MOB4Q9Y3A3 225 aa11.52□□□□□ -0.57
IRF3-219ENST00000597636 TRAV12-3A0A0B4J271 114 aa11.52□□□□□ -0.57
IRF3-219ENST00000597636 ZNF56Q15929 161 aa11.51□□□□□ -0.57
IRF3-219ENST00000597636 C2orf82Q6UX34 121 aa11.51□□□□□ -0.57
IRF3-219ENST00000597636 LITAFQ99732 161 aa11.51□□□□□ -0.57
IRF3-219ENST00000597636 IGLV4-3A0A075B6K6 122 aa11.5□□□□□ -0.57
IRF3-219ENST00000597636 C9orf85Q96MD7 179 aa11.5□□□□□ -0.57
IRF3-219ENST00000597636 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.5□□□□□ -0.577e-9■■■■■ 30
IRF3-219ENST00000597636 H7C423 109 aa11.5□□□□□ -0.57
IRF3-219ENST00000597636 IGHV3-11P01762 117 aa11.5□□□□□ -0.57
IRF3-219ENST00000597636 IGHV3-30-3P0DP02 117 aa11.5□□□□□ -0.57
IRF3-219ENST00000597636 IGHV3-16A0A0C4DH30 117 aa11.5□□□□□ -0.57
IRF3-219ENST00000597636 ADARB2-AS1A8MUL3 147 aa11.5□□□□□ -0.57
IRF3-219ENST00000597636 PRSS2P07478 247 aa11.5□□□□□ -0.57
IRF3-219ENST00000597636 ICOSQ9Y6W8 199 aa11.5□□□□□ -0.57
IRF3-219ENST00000597636 SPXQ9BT56 116 aa11.49□□□□□ -0.57
IRF3-219ENST00000597636 HELZ2Q9BYK8 2649 aaKnown RBP11.49□□□□□ -0.57
IRF3-219ENST00000597636 FBN2P35556 2912 aa11.49□□□□□ -0.57
IRF3-219ENST00000597636 USMG5Q96IX5 58 aa11.49□□□□□ -0.57
IRF3-219ENST00000597636 H3BT86 120 aa11.48□□□□□ -0.57
IRF3-219ENST00000597636 I3L3M4 83 aa11.48□□□□□ -0.57
IRF3-219ENST00000597636 MRPL23Q16540 153 aaKnown RBP11.48□□□□□ -0.57
IRF3-219ENST00000597636 NRGNQ92686 78 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms