RNA–Protein interactions for RNA: ENST00000596624.1

PNKP-208, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-208ENST00000596624 FXYD6-FXYD2A0A087WZ82 144 aa6.79□□□□□ -1.32
PNKP-208ENST00000596624 TMSB15BA0A087X1C1 80 aa6.79□□□□□ -1.32
PNKP-208ENST00000596624 TMEM262E9PQX1 116 aa6.79□□□□□ -1.32
PNKP-208ENST00000596624 CRPP02741 224 aa6.79□□□□□ -1.32
PNKP-208ENST00000596624 ANGP03950 147 aaKnown RBP6.79□□□□□ -1.32
PNKP-208ENST00000596624 RPL37AP61513 92 aaKnown RBP6.79□□□□□ -1.32
PNKP-208ENST00000596624 CNBPP62633 177 aaKnown RBP6.79□□□□□ -1.32
PNKP-208ENST00000596624 IQCJQ1A5X6 159 aa6.79□□□□□ -1.32
PNKP-208ENST00000596624 CLRN3Q8NCR9 226 aa6.79□□□□□ -1.32
PNKP-208ENST00000596624 ZNF471Q9BX82 626 aaPredicted RBP6.79□□□□□ -1.32
PNKP-208ENST00000596624 PAGE4O60829 102 aa6.78□□□□□ -1.32
PNKP-208ENST00000596624 AKR1C3P42330 323 aa6.78□□□□□ -1.32
PNKP-208ENST00000596624 RBX1P62877 108 aa6.78□□□□□ -1.32
PNKP-208ENST00000596624 STOML3Q8TAV4 291 aa6.78□□□□□ -1.32
PNKP-208ENST00000596624 PLA2G2DQ9UNK4 145 aa6.78□□□□□ -1.32
PNKP-208ENST00000596624 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.78□□□□□ -1.32
PNKP-208ENST00000596624 A0A1B0GUV1 79 aa6.77□□□□□ -1.33
PNKP-208ENST00000596624 PANO1I0J062 215 aa6.77□□□□□ -1.33
PNKP-208ENST00000596624 ZNF56Q15929 161 aa6.77□□□□□ -1.33
PNKP-208ENST00000596624 CST9LP1Q5W188 147 aa6.77□□□□□ -1.33
PNKP-208ENST00000596624 Q6ZRU5 148 aa6.77□□□□□ -1.33
PNKP-208ENST00000596624 BAGE2Q86Y30 109 aa6.77□□□□□ -1.33
PNKP-208ENST00000596624 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.77□□□□□ -1.33
PNKP-208ENST00000596624 CHCHD5Q9BSY4 110 aa6.77□□□□□ -1.33
PNKP-208ENST00000596624 BATF3Q9NR55 127 aa6.77□□□□□ -1.33
PNKP-208ENST00000596624 TNXBP22105 4242 aa6.77□□□□□ -1.33
PNKP-208ENST00000596624 UMAD1C9J7I0 102 aa6.76□□□□□ -1.33
PNKP-208ENST00000596624 M0QY20 66 aa6.76□□□□□ -1.33
PNKP-208ENST00000596624 ZNF345Q14585 488 aa6.76□□□□□ -1.33
PNKP-208ENST00000596624 LINC00269Q8N2A0 174 aa6.76□□□□□ -1.33
PNKP-208ENST00000596624 TRBV25-1A0A075B6N4 114 aa6.75□□□□□ -1.33
PNKP-208ENST00000596624 TRAV8-4A0A0B4J246 113 aa6.75□□□□□ -1.33
PNKP-208ENST00000596624 SCO2A0A1W2PP80 73 aa6.75□□□□□ -1.33
PNKP-208ENST00000596624 P01737 135 aa6.75□□□□□ -1.33
PNKP-208ENST00000596624 HLA-DQA1P01909 254 aa6.75□□□□□ -1.33
PNKP-208ENST00000596624 IGLC6P0CF74 106 aa6.75□□□□□ -1.33
PNKP-208ENST00000596624 SPANXN1Q5VSR9 72 aa6.75□□□□□ -1.33
PNKP-208ENST00000596624 KCNRGQ8N5I3 272 aa6.75□□□□□ -1.33
PNKP-208ENST00000596624 C20orf203Q8NBC4 194 aa6.75□□□□□ -1.33
PNKP-208ENST00000596624 RNF185Q96GF1 192 aa6.75□□□□□ -1.33
PNKP-208ENST00000596624 DERL1Q9BUN8 251 aa6.75□□□□□ -1.33
PNKP-208ENST00000596624 IGHV1-24A0A0C4DH33 117 aa6.74□□□□□ -1.33
PNKP-208ENST00000596624 ARPC5O15511 151 aa6.74□□□□□ -1.33
PNKP-208ENST00000596624 SLPIP03973 132 aa6.74□□□□□ -1.33
PNKP-208ENST00000596624 GZMBP10144 247 aa6.74□□□□□ -1.33
PNKP-208ENST00000596624 REG3AQ06141 175 aa6.74□□□□□ -1.33
PNKP-208ENST00000596624 TMUB2Q71RG4 321 aa6.74□□□□□ -1.33
PNKP-208ENST00000596624 SFT2D1Q8WV19 159 aa6.74□□□□□ -1.33
PNKP-208ENST00000596624 C11orf52Q96A22 123 aa6.74□□□□□ -1.33
PNKP-208ENST00000596624 PGLYRP4Q96LB8 373 aa6.74□□□□□ -1.33
PNKP-208ENST00000596624 AP1S3Q96PC3 154 aa6.74□□□□□ -1.33
PNKP-208ENST00000596624 A0A0D9SG52 128 aa6.73□□□□□ -1.33
PNKP-208ENST00000596624 C19orf71A6NCJ1 209 aa6.73□□□□□ -1.33
PNKP-208ENST00000596624 F5H697 171 aa6.73□□□□□ -1.33
PNKP-208ENST00000596624 GAGE6Q13070 117 aa6.73□□□□□ -1.33
PNKP-208ENST00000596624 TRAV1-1A0A0B4J248 108 aa6.72□□□□□ -1.33
PNKP-208ENST00000596624 MUC21A0A0G2JKD1 596 aa6.72□□□□□ -1.33
PNKP-208ENST00000596624 MUC21A0A140T8X8 626 aa6.72□□□□□ -1.33
PNKP-208ENST00000596624 HMSDA8MTL9 139 aa6.72□□□□□ -1.33
PNKP-208ENST00000596624 H7C1H1 209 aa6.72□□□□□ -1.33
PNKP-208ENST00000596624 RPL35P42766 123 aaKnown RBP6.72□□□□□ -1.33
PNKP-208ENST00000596624 SPACA4Q8TDM5 124 aa6.72□□□□□ -1.33
PNKP-208ENST00000596624 SMIM12Q96EX1 92 aa6.72□□□□□ -1.33
PNKP-208ENST00000596624 GFRA4Q9GZZ7 299 aa6.72□□□□□ -1.33
PNKP-208ENST00000596624 PLAC8Q9NZF1 115 aa6.72□□□□□ -1.33
PNKP-208ENST00000596624 IGLV4-60A0A075B6I1 120 aa6.71□□□□□ -1.34
PNKP-208ENST00000596624 A0A087WYN8 130 aa6.71□□□□□ -1.34
PNKP-208ENST00000596624 PFDN1O60925 122 aa6.71□□□□□ -1.34
PNKP-208ENST00000596624 SMIM17P0DL12 118 aa6.71□□□□□ -1.34
PNKP-208ENST00000596624 RPS20P60866 119 aaKnown RBP6.71□□□□□ -1.34
PNKP-208ENST00000596624 CACNG7P62955 275 aa6.71□□□□□ -1.34
PNKP-208ENST00000596624 SUMO4Q6EEV6 95 aa6.71□□□□□ -1.34
PNKP-208ENST00000596624 WDR73Q6P4I2 378 aa6.71□□□□□ -1.34
PNKP-208ENST00000596624 CLPSL2Q6UWE3 100 aa6.71□□□□□ -1.34
PNKP-208ENST00000596624 FAM213BQ8TBF2 198 aa6.71□□□□□ -1.34
PNKP-208ENST00000596624 LRP2P98164 4655 aa6.71□□□□□ -1.34
PNKP-208ENST00000596624 IGHV3-64A0A075B6Q5 118 aa6.7□□□□□ -1.34
PNKP-208ENST00000596624 F2Z2F3 143 aa6.7□□□□□ -1.34
PNKP-208ENST00000596624 H2AFB1P0C5Y9 115 aa6.7□□□□□ -1.34
PNKP-208ENST00000596624 RASL11AQ6T310 242 aa6.7□□□□□ -1.34
PNKP-208ENST00000596624 FER1L6-AS1Q8NA97 138 aa6.7□□□□□ -1.34
PNKP-208ENST00000596624 TMEM243Q9BU79 118 aa6.7□□□□□ -1.34
PNKP-208ENST00000596624 CNFNQ9BYD5 112 aa6.7□□□□□ -1.34
PNKP-208ENST00000596624 NIT2Q9NQR4 276 aa6.7□□□□□ -1.34
PNKP-208ENST00000596624 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.69□□□□□ -1.34
PNKP-208ENST00000596624 hDV102S1A0JD36 115 aa6.69□□□□□ -1.34
PNKP-208ENST00000596624 C9orf62Q8N4C0 152 aa6.69□□□□□ -1.34
PNKP-208ENST00000596624 C15orf56Q8N910 161 aa6.69□□□□□ -1.34
PNKP-208ENST00000596624 MANBALQ9NQG1 85 aa6.69□□□□□ -1.34
PNKP-208ENST00000596624 IGLV10-54A0A075B6I4 117 aa6.68□□□□□ -1.34
PNKP-208ENST00000596624 BCL2L11O43521 198 aa6.68□□□□□ -1.34
PNKP-208ENST00000596624 NKX2-5P52952 324 aaPredicted RBP6.68□□□□□ -1.34
PNKP-208ENST00000596624 CCL20P78556 96 aa6.68□□□□□ -1.34
PNKP-208ENST00000596624 AP5S1Q9NUS5 200 aa6.68□□□□□ -1.34
PNKP-208ENST00000596624 TRBV20OR9-2A0A075B6H5 130 aa6.67□□□□□ -1.34
PNKP-208ENST00000596624 SMLR1H3BR10 107 aa6.67□□□□□ -1.34
PNKP-208ENST00000596624 TRGC1P0CF51 173 aa6.67□□□□□ -1.34
PNKP-208ENST00000596624 CHTF8P0CG12 524 aa6.67□□□□□ -1.34
PNKP-208ENST00000596624 CTRLP40313 264 aa6.67□□□□□ -1.34
PNKP-208ENST00000596624 EIF5AP63241 154 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms