RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 LYZL1Q6UWQ5 148 aa8.7□□□□□ -1.02
USE1-207ENST00000596136 CNFNQ9BYD5 112 aa8.7□□□□□ -1.02
USE1-207ENST00000596136 Q9HAA7 133 aa8.7□□□□□ -1.02
USE1-207ENST00000596136 TRBV6-8A0A0A6YYG3 113 aa8.69□□□□□ -1.02
USE1-207ENST00000596136 F5H697 171 aa8.69□□□□□ -1.02
USE1-207ENST00000596136 M0QY20 66 aa8.69□□□□□ -1.02
USE1-207ENST00000596136 PSCAO43653 123 aa8.69□□□□□ -1.02
USE1-207ENST00000596136 TPPP3Q9BW30 176 aa8.69□□□□□ -1.02
USE1-207ENST00000596136 TM2D2Q9BX73 214 aa8.69□□□□□ -1.02
USE1-207ENST00000596136 NTF3P20783 257 aa8.68□□□□□ -1.02
USE1-207ENST00000596136 TMEM97Q5BJF2 176 aa8.68□□□□□ -1.02
USE1-207ENST00000596136 LCE2DQ5TA82 110 aaPredicted RBP8.68□□□□□ -1.02
USE1-207ENST00000596136 FAM231DQ6ZW35 169 aa8.68□□□□□ -1.02
USE1-207ENST00000596136 DNAJC30Q96LL9 226 aa8.68□□□□□ -1.02
USE1-207ENST00000596136 FAM210AQ96ND0 272 aa8.68□□□□□ -1.02
USE1-207ENST00000596136 RNASE7Q9H1E1 156 aaKnown RBP8.68□□□□□ -1.02
USE1-207ENST00000596136 RPP21Q9H633 154 aaKnown RBP8.68□□□□□ -1.02
USE1-207ENST00000596136 TRGC1P0CF51 173 aa8.67□□□□□ -1.02
USE1-207ENST00000596136 FUSP35637 526 aaKnown RBP eCLIP8.67□□□□□ -1.02
USE1-207ENST00000596136 NTM-AS1Q6ZSK4 140 aa8.67□□□□□ -1.02
USE1-207ENST00000596136 NTN5Q8WTR8 489 aaPredicted RBP8.67□□□□□ -1.02
USE1-207ENST00000596136 COX11Q9Y6N1 276 aa8.67□□□□□ -1.02
USE1-207ENST00000596136 URGCP-MRPS24S4R325 110 aa8.67□□□□□ -1.02
USE1-207ENST00000596136 A0A087WX48 190 aa8.66□□□□□ -1.02
USE1-207ENST00000596136 H7C1H1 209 aa8.66□□□□□ -1.02
USE1-207ENST00000596136 ELOBQ15370 118 aa8.66□□□□□ -1.02
USE1-207ENST00000596136 SUMO4Q6EEV6 95 aa8.66□□□□□ -1.02
USE1-207ENST00000596136 ATRAIDQ6UW56 229 aa8.66□□□□□ -1.02
USE1-207ENST00000596136 Q8N814 137 aa8.66□□□□□ -1.02
USE1-207ENST00000596136 MAPKAPK5-AS1Q8N8E1 139 aa8.66□□□□□ -1.02
USE1-207ENST00000596136 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.66□□□□□ -1.02
USE1-207ENST00000596136 KRTAP4-5Q9BYR2 181 aa8.66□□□□□ -1.02
USE1-207ENST00000596136 DPH3P1Q9H4G8 78 aa8.66□□□□□ -1.02
USE1-207ENST00000596136 DNAH8Q96JB1 4490 aa8.65□□□□□ -1.02
USE1-207ENST00000596136 FOXA3P55318 350 aaPredicted RBP8.65□□□□□ -1.02
USE1-207ENST00000596136 KRTAP10-1P60331 282 aa8.65□□□□□ -1.02
USE1-207ENST00000596136 CT83Q5H943 113 aa8.65□□□□□ -1.02
USE1-207ENST00000596136 Q8N1X5 172 aa8.65□□□□□ -1.02
USE1-207ENST00000596136 GTSF1Q8WW33 167 aa8.65□□□□□ -1.02
USE1-207ENST00000596136 EIF5A2Q9GZV4 153 aaKnown RBP8.65□□□□□ -1.02
USE1-207ENST00000596136 KLK12Q9UKR0 248 aa8.65□□□□□ -1.02
USE1-207ENST00000596136 GATCO43716 136 aaKnown RBP8.64□□□□□ -1.03
USE1-207ENST00000596136 MGPP08493 103 aa8.64□□□□□ -1.03
USE1-207ENST00000596136 SRP19P09132 144 aaKnown RBP8.64□□□□□ -1.03
USE1-207ENST00000596136 GCSHP23434 173 aa8.64□□□□□ -1.03
USE1-207ENST00000596136 PKIAP61925 76 aa8.64□□□□□ -1.03
USE1-207ENST00000596136 IQCJQ1A5X6 159 aa8.64□□□□□ -1.03
USE1-207ENST00000596136 RASL11AQ6T310 242 aa8.64□□□□□ -1.03
USE1-207ENST00000596136 RMI2Q96E14 147 aa8.64□□□□□ -1.03
USE1-207ENST00000596136 SMIM7Q9BQ49 75 aa8.64□□□□□ -1.03
USE1-207ENST00000596136 A8MWL6 223 aa8.63□□□□□ -1.03
USE1-207ENST00000596136 XGP55808 180 aa8.63□□□□□ -1.03
USE1-207ENST00000596136 Q0VG73 95 aa8.63□□□□□ -1.03
USE1-207ENST00000596136 WFDC2Q14508 124 aa8.63□□□□□ -1.03
USE1-207ENST00000596136 TWIST1Q15672 202 aa8.63□□□□□ -1.03
USE1-207ENST00000596136 MPV17L2Q567V2 206 aa8.63□□□□□ -1.03
USE1-207ENST00000596136 KCNIP4Q6PIL6 250 aa8.63□□□□□ -1.03
USE1-207ENST00000596136 LINC01551Q86U37 167 aa8.63□□□□□ -1.03
USE1-207ENST00000596136 FRZBQ92765 325 aa8.63□□□□□ -1.03
USE1-207ENST00000596136 NIT2Q9NQR4 276 aa8.63□□□□□ -1.03
USE1-207ENST00000596136 TRBV25-1A0A075B6N4 114 aa8.62□□□□□ -1.03
USE1-207ENST00000596136 TMEM262E9PQX1 116 aa8.62□□□□□ -1.03
USE1-207ENST00000596136 TEX261Q6UWH6 196 aa8.62□□□□□ -1.03
USE1-207ENST00000596136 ENHOQ6UWT2 76 aa8.62□□□□□ -1.03
USE1-207ENST00000596136 UBE2WQ96B02 151 aa8.62□□□□□ -1.03
USE1-207ENST00000596136 CHCHD5Q9BSY4 110 aa8.62□□□□□ -1.03
USE1-207ENST00000596136 IGLV5-52A0A0A0MRZ9 124 aa8.61□□□□□ -1.03
USE1-207ENST00000596136 FAM231BA6NCW3 169 aa8.61□□□□□ -1.03
USE1-207ENST00000596136 ZNF727A8MUV8 499 aa8.61□□□□□ -1.03
USE1-207ENST00000596136 CEBPGP53567 150 aa8.61□□□□□ -1.03
USE1-207ENST00000596136 PGLYRP4Q96LB8 373 aa8.61□□□□□ -1.03
USE1-207ENST00000596136 OSTCQ9NRP0 149 aa8.61□□□□□ -1.03
USE1-207ENST00000596136 PRR34Q9NV39 138 aa8.61□□□□□ -1.03
USE1-207ENST00000596136 FAT1Q14517 4588 aa8.61□□□□□ -1.03
USE1-207ENST00000596136 IGKV2D-24A0A075B6R9 120 aa8.6□□□□□ -1.03
USE1-207ENST00000596136 IGHV1-24A0A0C4DH33 117 aa8.6□□□□□ -1.03
USE1-207ENST00000596136 FAM74A3Q4VXF1 159 aa8.6□□□□□ -1.03
USE1-207ENST00000596136 GATD1Q8NB37 220 aa8.6□□□□□ -1.03
USE1-207ENST00000596136 BAALCQ8WXS3 180 aa8.6□□□□□ -1.03
USE1-207ENST00000596136 GFRA4Q9GZZ7 299 aa8.6□□□□□ -1.03
USE1-207ENST00000596136 RBX1P62877 108 aa8.59□□□□□ -1.03
USE1-207ENST00000596136 C15orf54Q8N8G6 183 aa8.59□□□□□ -1.03
USE1-207ENST00000596136 Q8N976 141 aa8.59□□□□□ -1.03
USE1-207ENST00000596136 TSKUQ8WUA8 353 aa8.59□□□□□ -1.03
USE1-207ENST00000596136 TMEM70Q9BUB7 260 aa8.59□□□□□ -1.03
USE1-207ENST00000596136 SMDT1Q9H4I9 107 aa8.59□□□□□ -1.03
USE1-207ENST00000596136 VPS13BQ7Z7G8 4022 aa8.59□□□□□ -1.03
USE1-207ENST00000596136 A0A1B0GUV1 79 aa8.58□□□□□ -1.04
USE1-207ENST00000596136 C9JQL5 133 aa8.58□□□□□ -1.04
USE1-207ENST00000596136 ANGP03950 147 aaKnown RBP8.58□□□□□ -1.04
USE1-207ENST00000596136 GAGE6Q13070 117 aa8.58□□□□□ -1.04
USE1-207ENST00000596136 MIAQ16674 131 aa8.58□□□□□ -1.04
USE1-207ENST00000596136 TMEM241Q24JQ0 296 aa8.58□□□□□ -1.04
USE1-207ENST00000596136 SMIM15Q7Z3B0 74 aa8.58□□□□□ -1.04
USE1-207ENST00000596136 C1orf43Q9BWL3 253 aa8.58□□□□□ -1.04
USE1-207ENST00000596136 LECT2O14960 151 aa8.57□□□□□ -1.04
USE1-207ENST00000596136 V9GYV3 84 aa8.57□□□□□ -1.04
USE1-207ENST00000596136 TRAV26-2A0A0B4J265 109 aa8.56□□□□□ -1.04
USE1-207ENST00000596136 A0A1B0GUT8 65 aa8.56□□□□□ -1.04
USE1-207ENST00000596136 HIGD1CA8MV81 97 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms