RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 TMEM70Q9BUB7 260 aa11.79□□□□□ -0.52
PNKP-206ENST00000595792 BIN3Q9NQY0 253 aa11.79□□□□□ -0.52
PNKP-206ENST00000595792 MED9Q9NWA0 146 aa11.79□□□□□ -0.52
PNKP-206ENST00000595792 GNG4P50150 75 aa11.78□□□□□ -0.52
PNKP-206ENST00000595792 VAX2Q9UIW0 290 aa11.78□□□□□ -0.52
PNKP-206ENST00000595792 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.77□□□□□ -0.53
PNKP-206ENST00000595792 ALKAL2Q6UX46 152 aa11.77□□□□□ -0.53
PNKP-206ENST00000595792 TM2D2Q9BX73 214 aa11.77□□□□□ -0.53
PNKP-206ENST00000595792 NTM-AS1Q6ZSK4 140 aa11.76□□□□□ -0.53
PNKP-206ENST00000595792 FER1L6-AS1Q8NA97 138 aa11.76□□□□□ -0.53
PNKP-206ENST00000595792 BAALCQ8WXS3 180 aa11.76□□□□□ -0.53
PNKP-206ENST00000595792 KLK12Q9UKR0 248 aa11.76□□□□□ -0.53
PNKP-206ENST00000595792 TRBV6-8A0A0A6YYG3 113 aa11.75□□□□□ -0.53
PNKP-206ENST00000595792 TRAV8-3A0A0A6YYJ7 113 aa11.75□□□□□ -0.53
PNKP-206ENST00000595792 A0A1B0GVG6 124 aa11.75□□□□□ -0.53
PNKP-206ENST00000595792 F5H697 171 aa11.75□□□□□ -0.53
PNKP-206ENST00000595792 FAM229AH3BQW9 127 aa11.75□□□□□ -0.53
PNKP-206ENST00000595792 K7EN84 100 aa11.75□□□□□ -0.53
PNKP-206ENST00000595792 LINC01620Q4KN68 170 aa11.75□□□□□ -0.53
PNKP-206ENST00000595792 DAZAP1Q96EP5 407 aaKnown RBP11.75□□□□□ -0.53
PNKP-206ENST00000595792 TPPP3Q9BW30 176 aa11.75□□□□□ -0.53
PNKP-206ENST00000595792 SRRM2Q9UQ35 2752 aaKnown RBP11.74□□□□□ -0.53
PNKP-206ENST00000595792 RPS20P60866 119 aaKnown RBP11.74□□□□□ -0.53
PNKP-206ENST00000595792 NUDT10Q8NFP7 164 aa11.74□□□□□ -0.53
PNKP-206ENST00000595792 NUDT11Q96G61 164 aa11.74□□□□□ -0.53
PNKP-206ENST00000595792 AP1S3Q96PC3 154 aa11.74□□□□□ -0.53
PNKP-206ENST00000595792 XKRY2A2RUG3 117 aa11.73□□□□□ -0.53
PNKP-206ENST00000595792 P01737 135 aa11.73□□□□□ -0.53
PNKP-206ENST00000595792 NKX2-5P52952 324 aaPredicted RBP11.73□□□□□ -0.53
PNKP-206ENST00000595792 LYZL1Q6UWQ5 148 aa11.73□□□□□ -0.53
PNKP-206ENST00000595792 LYPD6BQ8NI32 183 aa11.73□□□□□ -0.53
PNKP-206ENST00000595792 OCC1Q8TAD7 63 aa11.73□□□□□ -0.53
PNKP-206ENST00000595792 M0QY20 66 aa11.72□□□□□ -0.53
PNKP-206ENST00000595792 MPV17L2Q567V2 206 aa11.72□□□□□ -0.53
PNKP-206ENST00000595792 TOR2AQ5JU69 321 aa11.72□□□□□ -0.53
PNKP-206ENST00000595792 SUMO4Q6EEV6 95 aa11.72□□□□□ -0.53
PNKP-206ENST00000595792 UBE2WQ96B02 151 aa11.72□□□□□ -0.53
PNKP-206ENST00000595792 RNASE7Q9H1E1 156 aaKnown RBP11.72□□□□□ -0.53
PNKP-206ENST00000595792 URGCP-MRPS24S4R325 110 aa11.72□□□□□ -0.53
PNKP-206ENST00000595792 IGKV2D-24A0A075B6R9 120 aa11.71□□□□□ -0.53
PNKP-206ENST00000595792 MGPP08493 103 aa11.71□□□□□ -0.53
PNKP-206ENST00000595792 SMIM17P0DL12 118 aa11.71□□□□□ -0.53
PNKP-206ENST00000595792 CACNG7P62955 275 aa11.71□□□□□ -0.53
PNKP-206ENST00000595792 ENHOQ6UWT2 76 aa11.71□□□□□ -0.53
PNKP-206ENST00000595792 CHCHD7Q9BUK0 85 aa11.71□□□□□ -0.53
PNKP-206ENST00000595792 FLG2Q5D862 2391 aaPredicted RBP11.71□□□□□ -0.54
PNKP-206ENST00000595792 A0A087WX48 190 aa11.7□□□□□ -0.54
PNKP-206ENST00000595792 NDUFS6O75380 124 aaKnown RBP11.7□□□□□ -0.54
PNKP-206ENST00000595792 CTRLP40313 264 aa11.7□□□□□ -0.54
PNKP-206ENST00000595792 ATRAIDQ6UW56 229 aa11.7□□□□□ -0.54
PNKP-206ENST00000595792 Q6ZSA8 131 aa11.7□□□□□ -0.54
PNKP-206ENST00000595792 DMBT1Q9UGM3 2413 aaPredicted RBP11.7□□□□□ -0.54
PNKP-206ENST00000595792 TMEM262E9PQX1 116 aa11.69□□□□□ -0.54
PNKP-206ENST00000595792 NTF3P20783 257 aa11.69□□□□□ -0.54
PNKP-206ENST00000595792 Q8N976 141 aa11.69□□□□□ -0.54
PNKP-206ENST00000595792 F2Z2F3 143 aa11.68□□□□□ -0.54
PNKP-206ENST00000595792 TMEM250H0YL14 139 aa11.68□□□□□ -0.54
PNKP-206ENST00000595792 C15orf54Q8N8G6 183 aa11.67□□□□□ -0.54
PNKP-206ENST00000595792 GTSF1Q8WW33 167 aa11.67□□□□□ -0.54
PNKP-206ENST00000595792 RMI2Q96E14 147 aa11.67□□□□□ -0.54
PNKP-206ENST00000595792 CHCHD5Q9BSY4 110 aa11.67□□□□□ -0.54
PNKP-206ENST00000595792 CNFNQ9BYD5 112 aa11.67□□□□□ -0.54
PNKP-206ENST00000595792 RPP21Q9H633 154 aaKnown RBP11.67□□□□□ -0.54
PNKP-206ENST00000595792 GAGE6Q13070 117 aa11.66□□□□□ -0.54
PNKP-206ENST00000595792 ELOBQ15370 118 aa11.66□□□□□ -0.54
PNKP-206ENST00000595792 LINC00528Q8N1L1 170 aa11.66□□□□□ -0.54
PNKP-206ENST00000595792 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.66□□□□□ -0.54
PNKP-206ENST00000595792 DEFB104AQ8WTQ1 72 aa11.66□□□□□ -0.54
PNKP-206ENST00000595792 COX11Q9Y6N1 276 aa11.66□□□□□ -0.54
PNKP-206ENST00000595792 ANGP03950 147 aaKnown RBP11.65□□□□□ -0.54
PNKP-206ENST00000595792 WDR73Q6P4I2 378 aa11.65□□□□□ -0.54
PNKP-206ENST00000595792 SCXQ7RTU7 201 aa11.65□□□□□ -0.54
PNKP-206ENST00000595792 DPH3P1Q9H4G8 78 aa11.65□□□□□ -0.54
PNKP-206ENST00000595792 TRGC1P0CF51 173 aa11.64□□□□□ -0.55
PNKP-206ENST00000595792 FOXA3P55318 350 aaPredicted RBP11.64□□□□□ -0.55
PNKP-206ENST00000595792 RBX1P62877 108 aa11.64□□□□□ -0.55
PNKP-206ENST00000595792 IQCJQ1A5X6 159 aa11.64□□□□□ -0.55
PNKP-206ENST00000595792 KRTAP26-1Q6PEX3 210 aa11.64□□□□□ -0.55
PNKP-206ENST00000595792 KCNIP4Q6PIL6 250 aa11.64□□□□□ -0.55
PNKP-206ENST00000595792 RASL11AQ6T310 242 aa11.64□□□□□ -0.55
PNKP-206ENST00000595792 Q0VG73 95 aa11.63□□□□□ -0.55
PNKP-206ENST00000595792 TMEM97Q5BJF2 176 aa11.63□□□□□ -0.55
PNKP-206ENST00000595792 CLPSL2Q6UWE3 100 aa11.63□□□□□ -0.55
PNKP-206ENST00000595792 EIF5A2Q9GZV4 153 aaKnown RBP11.63□□□□□ -0.55
PNKP-206ENST00000595792 TRBV25-1A0A075B6N4 114 aa11.62□□□□□ -0.55
PNKP-206ENST00000595792 H7C1H1 209 aa11.62□□□□□ -0.55
PNKP-206ENST00000595792 TWIST1Q15672 202 aa11.62□□□□□ -0.55
PNKP-206ENST00000595792 GATD1Q8NB37 220 aa11.62□□□□□ -0.55
PNKP-206ENST00000595792 C1orf43Q9BWL3 253 aa11.62□□□□□ -0.55
PNKP-206ENST00000595792 NIT2Q9NQR4 276 aa11.62□□□□□ -0.55
PNKP-206ENST00000595792 PRR34Q9NV39 138 aa11.62□□□□□ -0.55
PNKP-206ENST00000595792 TRAV26-2A0A0B4J265 109 aa11.61□□□□□ -0.55
PNKP-206ENST00000595792 IGHV1-24A0A0C4DH33 117 aa11.61□□□□□ -0.55
PNKP-206ENST00000595792 GATCO43716 136 aaKnown RBP11.61□□□□□ -0.55
PNKP-206ENST00000595792 CEBPGP53567 150 aa11.61□□□□□ -0.55
PNKP-206ENST00000595792 FAM231DQ6ZW35 169 aa11.61□□□□□ -0.55
PNKP-206ENST00000595792 C20orf203Q8NBC4 194 aa11.61□□□□□ -0.55
PNKP-206ENST00000595792 FAM210AQ96ND0 272 aa11.61□□□□□ -0.55
PNKP-206ENST00000595792 CRPP02741 224 aa11.6□□□□□ -0.55
PNKP-206ENST00000595792 PLA2G1BP04054 148 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms