RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 M0QY20 66 aa7.36□□□□□ -1.23
SHKBP1-206ENST00000595523 SMIM17P0DL12 118 aa7.36□□□□□ -1.23
SHKBP1-206ENST00000595523 SUMO4Q6EEV6 95 aa7.36□□□□□ -1.23
SHKBP1-206ENST00000595523 WDR73Q6P4I2 378 aa7.36□□□□□ -1.23
SHKBP1-206ENST00000595523 DAZ4Q86SG3 579 aaKnown RBP7.36□□□□□ -1.23
SHKBP1-206ENST00000595523 NIT1Q86X76 327 aa7.36□□□□□ -1.23
SHKBP1-206ENST00000595523 DAZ3Q9NR90 486 aaKnown RBP7.36□□□□□ -1.23
SHKBP1-206ENST00000595523 A0A087WTM6 91 aa7.35□□□□□ -1.23
SHKBP1-206ENST00000595523 ZNF727A8MUV8 499 aa7.35□□□□□ -1.23
SHKBP1-206ENST00000595523 C16orf90A8MZG2 172 aa7.35□□□□□ -1.23
SHKBP1-206ENST00000595523 GATCO43716 136 aaKnown RBP7.35□□□□□ -1.23
SHKBP1-206ENST00000595523 MGPP08493 103 aa7.35□□□□□ -1.23
SHKBP1-206ENST00000595523 FUSP35637 526 aaKnown RBP eCLIP7.35□□□□□ -1.23
SHKBP1-206ENST00000595523 LAGE3Q14657 143 aa7.35□□□□□ -1.23
SHKBP1-206ENST00000595523 Q9HAA7 133 aa7.35□□□□□ -1.23
SHKBP1-206ENST00000595523 ABCA13Q86UQ4 5058 aa7.34□□□□□ -1.23
SHKBP1-206ENST00000595523 PCLOQ9Y6V0 5065 aa7.34□□□□□ -1.23
SHKBP1-206ENST00000595523 TRBV6-8A0A0A6YYG3 113 aa7.34□□□□□ -1.23
SHKBP1-206ENST00000595523 TRGC1P0CF51 173 aa7.34□□□□□ -1.23
SHKBP1-206ENST00000595523 ERVFC1-1P60608 527 aa7.34□□□□□ -1.23
SHKBP1-206ENST00000595523 CT83Q5H943 113 aa7.34□□□□□ -1.23
SHKBP1-206ENST00000595523 NTM-AS1Q6ZSK4 140 aa7.34□□□□□ -1.23
SHKBP1-206ENST00000595523 DNAJC30Q96LL9 226 aa7.34□□□□□ -1.23
SHKBP1-206ENST00000595523 DPH3P1Q9H4G8 78 aa7.34□□□□□ -1.23
SHKBP1-206ENST00000595523 LRCOL1A6NCL2 159 aa7.33□□□□□ -1.24
SHKBP1-206ENST00000595523 FOXA3P55318 350 aaPredicted RBP7.33□□□□□ -1.24
SHKBP1-206ENST00000595523 TWIST1Q15672 202 aa7.33□□□□□ -1.24
SHKBP1-206ENST00000595523 A8MWL6 223 aa7.32□□□□□ -1.24
SHKBP1-206ENST00000595523 RPL23P62829 140 aaKnown RBP7.32□□□□□ -1.24
SHKBP1-206ENST00000595523 RASL11AQ6T310 242 aa7.32□□□□□ -1.24
SHKBP1-206ENST00000595523 ISOC2Q96AB3 205 aa7.32□□□□□ -1.24
SHKBP1-206ENST00000595523 PGLYRP4Q96LB8 373 aa7.32□□□□□ -1.24
SHKBP1-206ENST00000595523 KRTAP17-1Q9BYP8 105 aa7.32□□□□□ -1.24
SHKBP1-206ENST00000595523 OSTCQ9NRP0 149 aa7.32□□□□□ -1.24
SHKBP1-206ENST00000595523 V9GYV3 84 aa7.32□□□□□ -1.24
SHKBP1-206ENST00000595523 TRAV26-2A0A0B4J265 109 aa7.31□□□□□ -1.24
SHKBP1-206ENST00000595523 H7C1H1 209 aa7.31□□□□□ -1.24
SHKBP1-206ENST00000595523 TMEM241Q24JQ0 296 aa7.31□□□□□ -1.24
SHKBP1-206ENST00000595523 FAM74A3Q4VXF1 159 aa7.31□□□□□ -1.24
SHKBP1-206ENST00000595523 MPV17L2Q567V2 206 aa7.31□□□□□ -1.24
SHKBP1-206ENST00000595523 MAPKAPK5-AS1Q8N8E1 139 aa7.31□□□□□ -1.24
SHKBP1-206ENST00000595523 GATD1Q8NB37 220 aa7.31□□□□□ -1.24
SHKBP1-206ENST00000595523 TSKUQ8WUA8 353 aa7.31□□□□□ -1.24
SHKBP1-206ENST00000595523 CHCHD7Q9BUK0 85 aa7.31□□□□□ -1.24
SHKBP1-206ENST00000595523 KLK12Q9UKR0 248 aa7.31□□□□□ -1.24
SHKBP1-206ENST00000595523 HIGD1CA8MV81 97 aa7.3□□□□□ -1.24
SHKBP1-206ENST00000595523 WFDC2Q14508 124 aa7.3□□□□□ -1.24
SHKBP1-206ENST00000595523 PEA15Q15121 130 aa7.3□□□□□ -1.24
SHKBP1-206ENST00000595523 GFRA4Q9GZZ7 299 aa7.3□□□□□ -1.24
SHKBP1-206ENST00000595523 SMDT1Q9H4I9 107 aa7.3□□□□□ -1.24
SHKBP1-206ENST00000595523 NIT2Q9NQR4 276 aa7.3□□□□□ -1.24
SHKBP1-206ENST00000595523 URGCP-MRPS24S4R325 110 aa7.3□□□□□ -1.24
SHKBP1-206ENST00000595523 DNAH8Q96JB1 4490 aa7.3□□□□□ -1.24
SHKBP1-206ENST00000595523 A0A087WX48 190 aa7.29□□□□□ -1.24
SHKBP1-206ENST00000595523 TRAV8-3A0A0A6YYJ7 113 aa7.29□□□□□ -1.24
SHKBP1-206ENST00000595523 FAM231BA6NCW3 169 aa7.29□□□□□ -1.24
SHKBP1-206ENST00000595523 EREGO14944 169 aa7.29□□□□□ -1.24
SHKBP1-206ENST00000595523 PSCAO43653 123 aa7.29□□□□□ -1.24
SHKBP1-206ENST00000595523 CDK2AP2O75956 126 aa7.29□□□□□ -1.24
SHKBP1-206ENST00000595523 ADIRFQ15847 76 aa7.29□□□□□ -1.24
SHKBP1-206ENST00000595523 IQCJQ1A5X6 159 aa7.29□□□□□ -1.24
SHKBP1-206ENST00000595523 RPL39LQ96EH5 51 aaKnown RBP7.29□□□□□ -1.24
SHKBP1-206ENST00000595523 PGPEP1Q9NXJ5 209 aa7.29□□□□□ -1.24
SHKBP1-206ENST00000595523 NAT8Q9UHE5 227 aa7.29□□□□□ -1.24
SHKBP1-206ENST00000595523 A0A1B0GUT8 65 aa7.28□□□□□ -1.24
SHKBP1-206ENST00000595523 GAS8-AS1O95177 125 aa7.28□□□□□ -1.24
SHKBP1-206ENST00000595523 TMEM97Q5BJF2 176 aa7.28□□□□□ -1.24
SHKBP1-206ENST00000595523 CDPF1Q6NVV7 123 aa7.28□□□□□ -1.24
SHKBP1-206ENST00000595523 ATRAIDQ6UW56 229 aa7.28□□□□□ -1.24
SHKBP1-206ENST00000595523 ENHOQ6UWT2 76 aa7.28□□□□□ -1.24
SHKBP1-206ENST00000595523 C15orf54Q8N8G6 183 aa7.28□□□□□ -1.24
SHKBP1-206ENST00000595523 Q8N976 141 aa7.28□□□□□ -1.24
SHKBP1-206ENST00000595523 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.28□□□□□ -1.24
SHKBP1-206ENST00000595523 DEFB104AQ8WTQ1 72 aa7.28□□□□□ -1.24
SHKBP1-206ENST00000595523 UBE2WQ96B02 151 aa7.28□□□□□ -1.24
SHKBP1-206ENST00000595523 CHCHD5Q9BSY4 110 aa7.28□□□□□ -1.24
SHKBP1-206ENST00000595523 TRBV25-1A0A075B6N4 114 aa7.27□□□□□ -1.25
SHKBP1-206ENST00000595523 IGHV1-24A0A0C4DH33 117 aa7.27□□□□□ -1.25
SHKBP1-206ENST00000595523 TMEM262E9PQX1 116 aa7.27□□□□□ -1.25
SHKBP1-206ENST00000595523 GAGE6Q13070 117 aa7.27□□□□□ -1.25
SHKBP1-206ENST00000595523 Q8N814 137 aa7.27□□□□□ -1.25
SHKBP1-206ENST00000595523 NUP35Q8NFH5 326 aa7.27□□□□□ -1.25
SHKBP1-206ENST00000595523 FRZBQ92765 325 aa7.27□□□□□ -1.25
SHKBP1-206ENST00000595523 RNF185Q96GF1 192 aa7.27□□□□□ -1.25
SHKBP1-206ENST00000595523 TM2D2Q9BX73 214 aa7.27□□□□□ -1.25
SHKBP1-206ENST00000595523 SMIM27A0A1W2PRY6 76 aa7.26□□□□□ -1.25
SHKBP1-206ENST00000595523 LECT2O14960 151 aa7.26□□□□□ -1.25
SHKBP1-206ENST00000595523 KRTAP10-1P60331 282 aa7.26□□□□□ -1.25
SHKBP1-206ENST00000595523 RBX1P62877 108 aa7.26□□□□□ -1.25
SHKBP1-206ENST00000595523 IFITM2Q01629 132 aa7.26□□□□□ -1.25
SHKBP1-206ENST00000595523 ELOBQ15370 118 aa7.26□□□□□ -1.25
SHKBP1-206ENST00000595523 SMIM15Q7Z3B0 74 aa7.26□□□□□ -1.25
SHKBP1-206ENST00000595523 TMEM191AQ9H0A3 160 aa7.26□□□□□ -1.25
SHKBP1-206ENST00000595523 FAT1Q14517 4588 aa7.25□□□□□ -1.25
SHKBP1-206ENST00000595523 IGKV2D-24A0A075B6R9 120 aa7.25□□□□□ -1.25
SHKBP1-206ENST00000595523 ANGP03950 147 aaKnown RBP7.25□□□□□ -1.25
SHKBP1-206ENST00000595523 KCNIP4Q6PIL6 250 aa7.25□□□□□ -1.25
SHKBP1-206ENST00000595523 BAALCQ8WXS3 180 aa7.25□□□□□ -1.25
SHKBP1-206ENST00000595523 BORCS7Q96B45 105 aa7.25□□□□□ -1.25
SHKBP1-206ENST00000595523 KRTAP4-5Q9BYR2 181 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms