RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 ZNF56Q15929 161 aa10.47□□□□□ -0.73
USE1-206ENST00000595101 LY96Q9Y6Y9 160 aa10.47□□□□□ -0.73
USE1-206ENST00000595101 PKD1P98161 4303 aa10.46□□□□□ -0.73
USE1-206ENST00000595101 EVI2AP22794 236 aa10.46□□□□□ -0.74
USE1-206ENST00000595101 FAM231DQ6ZW35 169 aa10.46□□□□□ -0.74
USE1-206ENST00000595101 COMMD7Q86VX2 200 aa10.46□□□□□ -0.74
USE1-206ENST00000595101 PEA15Q15121 130 aa10.45□□□□□ -0.74
USE1-206ENST00000595101 SH2D6Q7Z4S9 175 aa10.45□□□□□ -0.74
USE1-206ENST00000595101 C6orf223Q8N319 242 aa10.45□□□□□ -0.74
USE1-206ENST00000595101 GTSF1LQ9H1H1 148 aa10.45□□□□□ -0.74
USE1-206ENST00000595101 PKHD1P08F94 4074 aa10.45□□□□□ -0.74
USE1-206ENST00000595101 DNAH11Q96DT5 4516 aa10.45□□□□□ -0.74
USE1-206ENST00000595101 PRSS29PA6NIE9 313 aa10.44□□□□□ -0.74
USE1-206ENST00000595101 F2Z2F3 143 aa10.44□□□□□ -0.74
USE1-206ENST00000595101 F5H697 171 aa10.44□□□□□ -0.74
USE1-206ENST00000595101 CTRLP40313 264 aa10.44□□□□□ -0.74
USE1-206ENST00000595101 RPL23P62829 140 aaKnown RBP10.44□□□□□ -0.74
USE1-206ENST00000595101 C4orf48Q5BLP8 95 aa10.44□□□□□ -0.74
USE1-206ENST00000595101 Q8N3U1 123 aa10.44□□□□□ -0.74
USE1-206ENST00000595101 AP1S3Q96PC3 154 aa10.44□□□□□ -0.74
USE1-206ENST00000595101 FOXA3P55318 350 aaPredicted RBP10.44□□□□□ -0.74
USE1-206ENST00000595101 TIRAPP58753 221 aa10.44□□□□□ -0.74
USE1-206ENST00000595101 TMEM241Q24JQ0 296 aa10.44□□□□□ -0.74
USE1-206ENST00000595101 NEXN-AS1Q8NBZ9 246 aa10.44□□□□□ -0.74
USE1-206ENST00000595101 A4D1N5 150 aa10.43□□□□□ -0.74
USE1-206ENST00000595101 CACNG7P62955 275 aa10.43□□□□□ -0.74
USE1-206ENST00000595101 MRPL52Q86TS9 123 aaKnown RBP10.43□□□□□ -0.74
USE1-206ENST00000595101 ISOC2Q96AB3 205 aa10.43□□□□□ -0.74
USE1-206ENST00000595101 PGLYRP4Q96LB8 373 aa10.43□□□□□ -0.74
USE1-206ENST00000595101 A0A1B0GVY2 172 aa10.42□□□□□ -0.74
USE1-206ENST00000595101 MGPP08493 103 aa10.42□□□□□ -0.74
USE1-206ENST00000595101 SMIM17P0DL12 118 aa10.42□□□□□ -0.74
USE1-206ENST00000595101 TNP2Q05952 138 aa10.42□□□□□ -0.74
USE1-206ENST00000595101 TWIST1Q15672 202 aa10.42□□□□□ -0.74
USE1-206ENST00000595101 TTC32Q5I0X7 151 aa10.42□□□□□ -0.74
USE1-206ENST00000595101 OR10J3Q5JRS4 329 aa10.42□□□□□ -0.74
USE1-206ENST00000595101 LELP1Q5T871 98 aa10.42□□□□□ -0.74
USE1-206ENST00000595101 CNFNQ9BYD5 112 aa10.42□□□□□ -0.74
USE1-206ENST00000595101 IGHV3-38A0A0C4DH36 116 aa10.42□□□□□ -0.74
USE1-206ENST00000595101 DNAH10OSP0CZ25 163 aa10.42□□□□□ -0.74
USE1-206ENST00000595101 ADIRFQ15847 76 aa10.42□□□□□ -0.74
USE1-206ENST00000595101 PET117Q6UWS5 81 aa10.42□□□□□ -0.74
USE1-206ENST00000595101 LINC00336Q6ZUF6 198 aa10.42□□□□□ -0.74
USE1-206ENST00000595101 OSTCQ9NRP0 149 aa10.42□□□□□ -0.74
USE1-206ENST00000595101 V9GYV3 84 aa10.42□□□□□ -0.74
USE1-206ENST00000595101 TRBV7-3A0A075B6L6 115 aa10.41□□□□□ -0.74
USE1-206ENST00000595101 TRBV10-1A0A0K0K1A3 114 aa10.41□□□□□ -0.74
USE1-206ENST00000595101 A8MWL6 223 aa10.41□□□□□ -0.74
USE1-206ENST00000595101 UBE2D3P61077 147 aa10.41□□□□□ -0.74
USE1-206ENST00000595101 UBE2D2P62837 147 aa10.41□□□□□ -0.74
USE1-206ENST00000595101 FAM74A3Q4VXF1 159 aa10.41□□□□□ -0.74
USE1-206ENST00000595101 SOHLH1Q5JUK2 328 aa10.41□□□□□ -0.74
USE1-206ENST00000595101 SMDT1Q9H4I9 107 aa10.41□□□□□ -0.74
USE1-206ENST00000595101 NAT8Q9UHE5 227 aa10.41□□□□□ -0.74
USE1-206ENST00000595101 M0QY20 66 aa10.4□□□□□ -0.74
USE1-206ENST00000595101 RPL36AP83881 106 aaKnown RBP10.4□□□□□ -0.74
USE1-206ENST00000595101 SUMO4Q6EEV6 95 aa10.4□□□□□ -0.74
USE1-206ENST00000595101 OR10G8Q8NGN5 311 aa10.4□□□□□ -0.74
USE1-206ENST00000595101 RPL36ALQ969Q0 106 aaKnown RBP10.4□□□□□ -0.74
USE1-206ENST00000595101 PACRGQ96M98 296 aaPredicted RBP10.4□□□□□ -0.74
USE1-206ENST00000595101 HIGD1CA8MV81 97 aa10.39□□□□□ -0.75
USE1-206ENST00000595101 IGHV3-30P01768 117 aa10.39□□□□□ -0.75
USE1-206ENST00000595101 IGHV3-33P01772 117 aa10.39□□□□□ -0.75
USE1-206ENST00000595101 IGHV3-30-3P0DP02 117 aa10.39□□□□□ -0.75
USE1-206ENST00000595101 IGHV3-30-5P0DP03 117 aa10.39□□□□□ -0.75
USE1-206ENST00000595101 CT83Q5H943 113 aa10.39□□□□□ -0.75
USE1-206ENST00000595101 TSKUQ8WUA8 353 aa10.39□□□□□ -0.75
USE1-206ENST00000595101 TRAV8-6A0A0B4J262 113 aa10.39□□□□□ -0.75
USE1-206ENST00000595101 Q6ZRN7 208 aaPredicted RBP10.39□□□□□ -0.75
USE1-206ENST00000595101 TRAV26-2A0A0B4J265 109 aa10.38□□□□□ -0.75
USE1-206ENST00000595101 K7EP13 123 aa10.38□□□□□ -0.75
USE1-206ENST00000595101 TRGC1P0CF51 173 aa10.38□□□□□ -0.75
USE1-206ENST00000595101 DEFB104AQ8WTQ1 72 aa10.38□□□□□ -0.75
USE1-206ENST00000595101 DPH3P1Q9H4G8 78 aa10.38□□□□□ -0.75
USE1-206ENST00000595101 PKIAP61925 76 aa10.37□□□□□ -0.75
USE1-206ENST00000595101 LINC01556Q5JQF7 62 aa10.37□□□□□ -0.75
USE1-206ENST00000595101 C15orf54Q8N8G6 183 aa10.37□□□□□ -0.75
USE1-206ENST00000595101 C5orf52A6NGY3 159 aa10.36□□□□□ -0.75
USE1-206ENST00000595101 DDTP30046 118 aa10.36□□□□□ -0.75
USE1-206ENST00000595101 NTM-AS1Q6ZSK4 140 aa10.36□□□□□ -0.75
USE1-206ENST00000595101 NUP35Q8NFH5 326 aa10.36□□□□□ -0.75
USE1-206ENST00000595101 GFRA4Q9GZZ7 299 aa10.36□□□□□ -0.75
USE1-206ENST00000595101 TSTD3H0UI37 97 aa10.35□□□□□ -0.75
USE1-206ENST00000595101 DAZ4Q86SG3 579 aaKnown RBP10.35□□□□□ -0.75
USE1-206ENST00000595101 GATD1Q8NB37 220 aa10.35□□□□□ -0.75
USE1-206ENST00000595101 ANAPC16Q96DE5 110 aa10.35□□□□□ -0.75
USE1-206ENST00000595101 DAZ3Q9NR90 486 aaKnown RBP10.35□□□□□ -0.75
USE1-206ENST00000595101 DYNC1H1Q14204 4646 aaKnown RBP10.35□□□□□ -0.75
USE1-206ENST00000595101 TRAV9-2A0A087WT02 112 aa10.34□□□□□ -0.75
USE1-206ENST00000595101 GAS8-AS1O95177 125 aa10.34□□□□□ -0.75
USE1-206ENST00000595101 UQCC3Q6UW78 93 aa10.34□□□□□ -0.75
USE1-206ENST00000595101 A0A087WWC5 75 aa10.34□□□□□ -0.75
USE1-206ENST00000595101 A0A1B0GUT8 65 aa10.34□□□□□ -0.75
USE1-206ENST00000595101 RASL11AQ6T310 242 aa10.34□□□□□ -0.75
USE1-206ENST00000595101 NIT1Q86X76 327 aa10.34□□□□□ -0.75
USE1-206ENST00000595101 DNAJC30Q96LL9 226 aa10.34□□□□□ -0.75
USE1-206ENST00000595101 TRBV6-8A0A0A6YYG3 113 aa10.33□□□□□ -0.76
USE1-206ENST00000595101 FAM231BA6NCW3 169 aa10.33□□□□□ -0.76
USE1-206ENST00000595101 RAB5BP61020 215 aa10.33□□□□□ -0.76
USE1-206ENST00000595101 RPL39LQ96EH5 51 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms