RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 GAS8-AS1O95177 125 aa11.6□□□□□ -0.55
PNKP-204ENST00000594661 USMG5Q96IX5 58 aa11.6□□□□□ -0.55
PNKP-204ENST00000594661 PRR25Q96S07 402 aa11.6□□□□□ -0.55
PNKP-204ENST00000594661 CCDC168Q8NDH2 2452 aa11.6□□□□□ -0.55
PNKP-204ENST00000594661 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.6□□□□□ -0.55
PNKP-204ENST00000594661 IL17RELQ6ZVW7 336 aa11.6□□□□□ -0.55
PNKP-204ENST00000594661 CNFNQ9BYD5 112 aa11.6□□□□□ -0.55
PNKP-204ENST00000594661 TRAV25A0A0B4J276 109 aa11.59□□□□□ -0.55
PNKP-204ENST00000594661 RPL13AP40429 203 aaKnown RBP11.59□□□□□ -0.55
PNKP-204ENST00000594661 C10orf99Q6UWK7 81 aa11.59□□□□□ -0.55
PNKP-204ENST00000594661 Q8N1Y9 231 aa11.59□□□□□ -0.55
PNKP-204ENST00000594661 RNF182Q8N6D2 247 aa11.59□□□□□ -0.55
PNKP-204ENST00000594661 ZNF580Q9UK33 172 aa11.59□□□□□ -0.55
PNKP-204ENST00000594661 GCN1Q92616 2671 aaKnown RBP11.59□□□□□ -0.55
PNKP-204ENST00000594661 ITPR2Q14571 2701 aa11.59□□□□□ -0.55
PNKP-204ENST00000594661 SMIM9A6NGZ8 99 aa11.59□□□□□ -0.55
PNKP-204ENST00000594661 UNQ9165/PRO28630Q6UXU0 137 aa11.58□□□□□ -0.56
PNKP-204ENST00000594661 C10orf126Q8N4M7 172 aa11.58□□□□□ -0.56
PNKP-204ENST00000594661 SLC50A1Q9BRV3 221 aa11.58□□□□□ -0.56
PNKP-204ENST00000594661 TRAV8-4A0A0B4J246 113 aa11.57□□□□□ -0.56
PNKP-204ENST00000594661 PRAC2D3DTV9 90 aa11.57□□□□□ -0.56
PNKP-204ENST00000594661 DUSP14O95147 198 aaKnown RBP11.57□□□□□ -0.56
PNKP-204ENST00000594661 LAGE3Q14657 143 aa11.57□□□□□ -0.56
PNKP-204ENST00000594661 U3KQE9 123 aa11.57□□□□□ -0.56
PNKP-204ENST00000594661 FLNAP21333 2647 aaKnown RBP11.57□□□□□ -0.56
PNKP-204ENST00000594661 UNC79Q9P2D8 2635 aa11.57□□□□□ -0.56
PNKP-204ENST00000594661 C9JAW5 83 aa11.57□□□□□ -0.56
PNKP-204ENST00000594661 PSMB8P28062 276 aa11.57□□□□□ -0.56
PNKP-204ENST00000594661 ERCC8Q13216 396 aa11.57□□□□□ -0.56
PNKP-204ENST00000594661 SRSF9Q13242 221 aaKnown RBP eCLIP11.57□□□□□ -0.56
PNKP-204ENST00000594661 TLN2Q9Y4G6 2542 aa11.56□□□□□ -0.56
PNKP-204ENST00000594661 ZNF815PA8K554 130 aa11.56□□□□□ -0.56
PNKP-204ENST00000594661 LINC00694P0DN24 101 aa11.56□□□□□ -0.56
PNKP-204ENST00000594661 ZNF80P51504 273 aaPredicted RBP11.56□□□□□ -0.56
PNKP-204ENST00000594661 SRSF2Q01130 221 aaKnown RBP11.56□□□□□ -0.56
PNKP-204ENST00000594661 PLEKHB2Q96CS7 222 aa11.56□□□□□ -0.56
PNKP-204ENST00000594661 DUX5Q96PT3 197 aa11.56□□□□□ -0.56
PNKP-204ENST00000594661 ZNF702PQ9H963 129 aa11.56□□□□□ -0.56
PNKP-204ENST00000594661 NDUFA4O00483 81 aa11.56□□□□□ -0.56
PNKP-204ENST00000594661 CFC1BP0CG36 223 aa11.56□□□□□ -0.56
PNKP-204ENST00000594661 CFC1P0CG37 223 aa11.56□□□□□ -0.56
PNKP-204ENST00000594661 NTN5Q8WTR8 489 aaPredicted RBP11.56□□□□□ -0.56
PNKP-204ENST00000594661 BAALCQ8WXS3 180 aa11.56□□□□□ -0.56
PNKP-204ENST00000594661 PRADC1Q9BSG0 188 aa11.56□□□□□ -0.56
PNKP-204ENST00000594661 M0R2P5 195 aa11.55□□□□□ -0.56
PNKP-204ENST00000594661 ZNF575Q86XF7 245 aa11.55□□□□□ -0.56
PNKP-204ENST00000594661 TRAV2A0A0B4J234 112 aa11.54□□□□□ -0.56
PNKP-204ENST00000594661 TRBV7-7A0A0K0K1E9 115 aa11.54□□□□□ -0.56
PNKP-204ENST00000594661 SCGB1D4Q6XE38 83 aa11.54□□□□□ -0.56
PNKP-204ENST00000594661 CITED2Q99967 270 aaPredicted RBP11.54□□□□□ -0.56
PNKP-204ENST00000594661 MSRB1Q9NZV6 116 aa11.54□□□□□ -0.56
PNKP-204ENST00000594661 RBAKDNA6NC62 111 aa11.54□□□□□ -0.56
PNKP-204ENST00000594661 GATA1P15976 413 aaPredicted RBP11.54□□□□□ -0.56
PNKP-204ENST00000594661 CHCHD5Q9BSY4 110 aa11.54□□□□□ -0.56
PNKP-204ENST00000594661 A0A1B0GX51 115 aa11.53□□□□□ -0.56
PNKP-204ENST00000594661 PRO1854Q9UHT4 67 aa11.53□□□□□ -0.56
PNKP-204ENST00000594661 LGALS9O00182 355 aa11.53□□□□□ -0.56
PNKP-204ENST00000594661 P0DMU3 169 aa11.53□□□□□ -0.56
PNKP-204ENST00000594661 FAM231AP0DMU4 169 aa11.53□□□□□ -0.56
PNKP-204ENST00000594661 FAM231CP0DMU5 169 aa11.53□□□□□ -0.56
PNKP-204ENST00000594661 KRTAP1-1Q07627 177 aa11.53□□□□□ -0.56
PNKP-204ENST00000594661 ORM1P02763 201 aa11.52□□□□□ -0.57
PNKP-204ENST00000594661 C3orf56Q8N813 242 aa11.52□□□□□ -0.57
PNKP-204ENST00000594661 NEXN-AS1Q8NBZ9 246 aa11.52□□□□□ -0.57
PNKP-204ENST00000594661 A0A0J9YY99 117 aa11.51□□□□□ -0.57
PNKP-204ENST00000594661 J3KT08 172 aa11.51□□□□□ -0.57
PNKP-204ENST00000594661 IGHV3-30P01768 117 aa11.51□□□□□ -0.57
PNKP-204ENST00000594661 IGHV3-30-5P0DP03 117 aa11.51□□□□□ -0.57
PNKP-204ENST00000594661 NRACQ8N912 160 aa11.51□□□□□ -0.57
PNKP-204ENST00000594661 MRPL53Q96EL3 112 aaKnown RBP11.51□□□□□ -0.57
PNKP-204ENST00000594661 C16orf92Q96LL3 132 aa11.51□□□□□ -0.57
PNKP-204ENST00000594661 AGPAT4-IT1Q9H0P7 198 aa11.51□□□□□ -0.57
PNKP-204ENST00000594661 SONP18583 2426 aaKnown RBP11.51□□□□□ -0.57
PNKP-204ENST00000594661 FAM240AA0A1B0GVK7 77 aa11.51□□□□□ -0.57
PNKP-204ENST00000594661 TMEM89A2RUT3 159 aa11.51□□□□□ -0.57
PNKP-204ENST00000594661 NDUFA7O95182 113 aa11.51□□□□□ -0.57
PNKP-204ENST00000594661 TRPT1Q86TN4 253 aaKnown RBP11.51□□□□□ -0.57
PNKP-204ENST00000594661 ANK3Q12955 4377 aaKnown RBP11.5□□□□□ -0.57
PNKP-204ENST00000594661 CUBNO60494 3623 aa11.5□□□□□ -0.57
PNKP-204ENST00000594661 LOC107984640A0A0U1RRK4 108 aa11.5□□□□□ -0.57
PNKP-204ENST00000594661 FAM19A5Q7Z5A7 132 aaPredicted RBP11.5□□□□□ -0.57
PNKP-204ENST00000594661 TEX49A0A1B0GTD5 131 aa11.49□□□□□ -0.57
PNKP-204ENST00000594661 EDN2P20800 178 aa11.49□□□□□ -0.57
PNKP-204ENST00000594661 LINC01620Q4KN68 170 aa11.49□□□□□ -0.57
PNKP-204ENST00000594661 SPANXDQ9BXN6 97 aa11.49□□□□□ -0.57
PNKP-204ENST00000594661 H3BMM0 161 aa11.48□□□□□ -0.57
PNKP-204ENST00000594661 GPHB5Q86YW7 130 aa11.48□□□□□ -0.57
PNKP-204ENST00000594661 UBE2WQ96B02 151 aa11.48□□□□□ -0.57
PNKP-204ENST00000594661 RPS28P62857 69 aaKnown RBP11.48□□□□□ -0.57
PNKP-204ENST00000594661 Q8N2B8 174 aa11.48□□□□□ -0.57
PNKP-204ENST00000594661 C3orf22Q8N5N4 141 aa11.48□□□□□ -0.57
PNKP-204ENST00000594661 SPANXCQ9NY87 97 aa11.48□□□□□ -0.57
PNKP-204ENST00000594661 HECTD1Q9ULT8 2610 aa11.48□□□□□ -0.57
PNKP-204ENST00000594661 FASNP49327 2511 aaKnown RBP11.47□□□□□ -0.57
PNKP-204ENST00000594661 IGHV7-4-1A0A0J9YVY3 117 aa11.47□□□□□ -0.57
PNKP-204ENST00000594661 TRBV10-2A0A0K0K1G8 114 aa11.47□□□□□ -0.57
PNKP-204ENST00000594661 IGHV3-33P01772 117 aa11.47□□□□□ -0.57
PNKP-204ENST00000594661 ELANEP08246 267 aa11.47□□□□□ -0.57
PNKP-204ENST00000594661 ATXN8Q156A1 80 aa11.47□□□□□ -0.57
PNKP-204ENST00000594661 C9orf47Q6ZRZ4 202 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms