RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 KRTAP26-1Q6PEX3 210 aa10.51□□□□□ -0.73
LIG1-205ENST00000593425 STOML3Q8TAV4 291 aa10.51□□□□□ -0.73
LIG1-205ENST00000593425 ZNF471Q9BX82 626 aaPredicted RBP10.51□□□□□ -0.73
LIG1-205ENST00000593425 PRR34Q9NV39 138 aa10.51□□□□□ -0.73
LIG1-205ENST00000593425 SNAI2O43623 268 aa10.5□□□□□ -0.73
LIG1-205ENST00000593425 PAGE4O60829 102 aa10.5□□□□□ -0.73
LIG1-205ENST00000593425 CXCL1P09341 107 aa10.5□□□□□ -0.73
LIG1-205ENST00000593425 RBX1P62877 108 aa10.5□□□□□ -0.73
LIG1-205ENST00000593425 SSBP4Q9BWG4 385 aaPredicted RBP10.5□□□□□ -0.73
LIG1-205ENST00000593425 PKIAP61925 76 aa10.49□□□□□ -0.73
LIG1-205ENST00000593425 GAGE6Q13070 117 aa10.49□□□□□ -0.73
LIG1-205ENST00000593425 DGAT2L7PQ6IED9 249 aa10.49□□□□□ -0.73
LIG1-205ENST00000593425 LINC00269Q8N2A0 174 aa10.49□□□□□ -0.73
LIG1-205ENST00000593425 VAX2Q9UIW0 290 aa10.49□□□□□ -0.73
LIG1-205ENST00000593425 SCO2A0A1W2PP80 73 aa10.48□□□□□ -0.73
LIG1-205ENST00000593425 F5H697 171 aa10.48□□□□□ -0.73
LIG1-205ENST00000593425 SSTP61278 116 aa10.48□□□□□ -0.73
LIG1-205ENST00000593425 SPANXN1Q5VSR9 72 aa10.48□□□□□ -0.73
LIG1-205ENST00000593425 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.48□□□□□ -0.73
LIG1-205ENST00000593425 MLST8Q9BVC4 326 aa10.48□□□□□ -0.73
LIG1-205ENST00000593425 KIF25-AS1Q9Y6Z4 181 aa10.48□□□□□ -0.73
LIG1-205ENST00000593425 ARPC5O15511 151 aa10.47□□□□□ -0.73
LIG1-205ENST00000593425 OR5AL1P0C617 328 aa10.47□□□□□ -0.73
LIG1-205ENST00000593425 MT1HL1P0DM35 61 aa10.47□□□□□ -0.73
LIG1-205ENST00000593425 TMEM97Q5BJF2 176 aa10.47□□□□□ -0.73
LIG1-205ENST00000593425 SDIM1Q6ZPB5 146 aa10.47□□□□□ -0.73
LIG1-205ENST00000593425 DERL1Q9BUN8 251 aa10.47□□□□□ -0.73
LIG1-205ENST00000593425 BAGE2Q86Y30 109 aa10.46□□□□□ -0.73
LIG1-205ENST00000593425 IGLV10-54A0A075B6I4 117 aa10.45□□□□□ -0.74
LIG1-205ENST00000593425 TRBV25-1A0A075B6N4 114 aa10.45□□□□□ -0.74
LIG1-205ENST00000593425 A0A1B0GV50 99 aa10.45□□□□□ -0.74
LIG1-205ENST00000593425 S100A9P06702 114 aaKnown RBP10.45□□□□□ -0.74
LIG1-205ENST00000593425 IQCJQ1A5X6 159 aa10.44□□□□□ -0.74
LIG1-205ENST00000593425 AP1S3Q96PC3 154 aa10.44□□□□□ -0.74
LIG1-205ENST00000593425 SMIM17P0DL12 118 aa10.43□□□□□ -0.74
LIG1-205ENST00000593425 REG3AQ06141 175 aa10.43□□□□□ -0.74
LIG1-205ENST00000593425 CIRBPQ14011 172 aaKnown RBP10.43□□□□□ -0.74
LIG1-205ENST00000593425 C20orf203Q8NBC4 194 aa10.43□□□□□ -0.74
LIG1-205ENST00000593425 FAM213BQ8TBF2 198 aa10.43□□□□□ -0.74
LIG1-205ENST00000593425 SFT2D1Q8WV19 159 aa10.43□□□□□ -0.74
LIG1-205ENST00000593425 MBD3L1Q8WWY6 194 aa10.43□□□□□ -0.74
LIG1-205ENST00000593425 IGHV1-24A0A0C4DH33 117 aa10.42□□□□□ -0.74
LIG1-205ENST00000593425 SMLR1H3BR10 107 aa10.42□□□□□ -0.74
LIG1-205ENST00000593425 PFDN1O60925 122 aa10.42□□□□□ -0.74
LIG1-205ENST00000593425 MGPP08493 103 aa10.42□□□□□ -0.74
LIG1-205ENST00000593425 CNBPP62633 177 aaKnown RBP10.42□□□□□ -0.74
LIG1-205ENST00000593425 CLRN3Q8NCR9 226 aa10.42□□□□□ -0.74
LIG1-205ENST00000593425 hDV102S1A0JD36 115 aa10.41□□□□□ -0.74
LIG1-205ENST00000593425 M0QY20 66 aa10.41□□□□□ -0.74
LIG1-205ENST00000593425 SLPIP03973 132 aa10.41□□□□□ -0.74
LIG1-205ENST00000593425 SUMO4Q6EEV6 95 aa10.41□□□□□ -0.74
LIG1-205ENST00000593425 GFRA4Q9GZZ7 299 aa10.41□□□□□ -0.74
LIG1-205ENST00000593425 IGLV4-60A0A075B6I1 120 aa10.4□□□□□ -0.74
LIG1-205ENST00000593425 A0A0D9SG52 128 aa10.4□□□□□ -0.74
LIG1-205ENST00000593425 CHTF8P0CG12 524 aa10.4□□□□□ -0.74
LIG1-205ENST00000593425 GZMBP10144 247 aa10.4□□□□□ -0.74
LIG1-205ENST00000593425 Q6ZRU5 148 aa10.4□□□□□ -0.74
LIG1-205ENST00000593425 TMUB2Q71RG4 321 aa10.4□□□□□ -0.74
LIG1-205ENST00000593425 IGLC6P0CF74 106 aa10.39□□□□□ -0.75
LIG1-205ENST00000593425 RPL35P42766 123 aaKnown RBP10.39□□□□□ -0.75
LIG1-205ENST00000593425 KCNRGQ8N5I3 272 aa10.39□□□□□ -0.75
LIG1-205ENST00000593425 IGHV3-64A0A075B6Q5 118 aa10.38□□□□□ -0.75
LIG1-205ENST00000593425 A0A087WYN8 130 aa10.38□□□□□ -0.75
LIG1-205ENST00000593425 TRAV8-4A0A0B4J246 113 aa10.38□□□□□ -0.75
LIG1-205ENST00000593425 P01737 135 aa10.38□□□□□ -0.75
LIG1-205ENST00000593425 RAB5CP51148 216 aa10.38□□□□□ -0.75
LIG1-205ENST00000593425 NKX2-5P52952 324 aaPredicted RBP10.38□□□□□ -0.75
LIG1-205ENST00000593425 TPPP3Q9BW30 176 aa10.38□□□□□ -0.75
LIG1-205ENST00000593425 A0A1B0GUV1 79 aa10.37□□□□□ -0.75
LIG1-205ENST00000593425 UMAD1C9J7I0 102 aa10.37□□□□□ -0.75
LIG1-205ENST00000593425 ZNF345Q14585 488 aa10.37□□□□□ -0.75
LIG1-205ENST00000593425 FER1L6-AS1Q8NA97 138 aa10.37□□□□□ -0.75
LIG1-205ENST00000593425 SPACA4Q8TDM5 124 aa10.37□□□□□ -0.75
LIG1-205ENST00000593425 TMEM243Q9BU79 118 aa10.37□□□□□ -0.75
LIG1-205ENST00000593425 H7C1H1 209 aa10.36□□□□□ -0.75
LIG1-205ENST00000593425 H2AFB1P0C5Y9 115 aa10.36□□□□□ -0.75
LIG1-205ENST00000593425 BATF3Q9NR55 127 aa10.36□□□□□ -0.75
LIG1-205ENST00000593425 AP5S1Q9NUS5 200 aa10.36□□□□□ -0.75
LIG1-205ENST00000593425 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.35□□□□□ -0.75
LIG1-205ENST00000593425 CENPWQ5EE01 88 aa10.35□□□□□ -0.75
LIG1-205ENST00000593425 RASL11AQ6T310 242 aa10.35□□□□□ -0.75
LIG1-205ENST00000593425 OR2D3Q8NGH3 330 aa10.35□□□□□ -0.75
LIG1-205ENST00000593425 C11orf52Q96A22 123 aa10.35□□□□□ -0.75
LIG1-205ENST00000593425 DPH3Q96FX2 82 aa10.35□□□□□ -0.75
LIG1-205ENST00000593425 RNF185Q96GF1 192 aa10.35□□□□□ -0.75
LIG1-205ENST00000593425 C19orf71A6NCJ1 209 aa10.34□□□□□ -0.75
LIG1-205ENST00000593425 CACNG7P62955 275 aa10.34□□□□□ -0.75
LIG1-205ENST00000593425 CCL20P78556 96 aa10.34□□□□□ -0.75
LIG1-205ENST00000593425 C15orf56Q8N910 161 aa10.34□□□□□ -0.75
LIG1-205ENST00000593425 PGLYRP4Q96LB8 373 aa10.34□□□□□ -0.75
LIG1-205ENST00000593425 TNXBP22105 4242 aa10.33□□□□□ -0.76
LIG1-205ENST00000593425 PHOX2AO14813 284 aa10.33□□□□□ -0.76
LIG1-205ENST00000593425 BCL2L11O43521 198 aa10.33□□□□□ -0.76
LIG1-205ENST00000593425 RPS20P60866 119 aaKnown RBP10.33□□□□□ -0.76
LIG1-205ENST00000593425 PLAC8Q9NZF1 115 aa10.33□□□□□ -0.76
LIG1-205ENST00000593425 WDR73Q6P4I2 378 aa10.32□□□□□ -0.76
LIG1-205ENST00000593425 MANBALQ9NQG1 85 aa10.32□□□□□ -0.76
LIG1-205ENST00000593425 NIT2Q9NQR4 276 aa10.32□□□□□ -0.76
LIG1-205ENST00000593425 GNG13Q9P2W3 67 aa10.32□□□□□ -0.76
LIG1-205ENST00000593425 RAB19A4D1S5 217 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms