RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 MANBALQ9NQG1 85 aa8.79□□□□□ -1
H3F3B-213ENST00000593254 SNAI2O43623 268 aa8.78□□□□□ -1
H3F3B-213ENST00000593254 GCSHP23434 173 aa8.78□□□□□ -1
H3F3B-213ENST00000593254 TAGLN2P37802 199 aaKnown RBP8.78□□□□□ -1
H3F3B-213ENST00000593254 CCL20P78556 96 aa8.78□□□□□ -1
H3F3B-213ENST00000593254 DAZ4Q86SG3 579 aaKnown RBP8.78□□□□□ -1
H3F3B-213ENST00000593254 OR10AG1Q8NH19 301 aa8.78□□□□□ -1
H3F3B-213ENST00000593254 NTN5Q8WTR8 489 aaPredicted RBP8.78□□□□□ -1
H3F3B-213ENST00000593254 C11orf52Q96A22 123 aa8.78□□□□□ -1
H3F3B-213ENST00000593254 SSBP4Q9BWG4 385 aaPredicted RBP8.78□□□□□ -1
H3F3B-213ENST00000593254 DAZ3Q9NR90 486 aaKnown RBP8.78□□□□□ -1
H3F3B-213ENST00000593254 SCO1O75880 301 aa8.77□□□□□ -1.01
H3F3B-213ENST00000593254 RPL35P42766 123 aaKnown RBP8.77□□□□□ -1.01
H3F3B-213ENST00000593254 SRSF3P84103 164 aaKnown RBP8.77□□□□□ -1.01
H3F3B-213ENST00000593254 Q8N814 137 aa8.77□□□□□ -1.01
H3F3B-213ENST00000593254 DERL1Q9BUN8 251 aa8.77□□□□□ -1.01
H3F3B-213ENST00000593254 TM2D2Q9BX73 214 aa8.77□□□□□ -1.01
H3F3B-213ENST00000593254 GNG13Q9P2W3 67 aa8.77□□□□□ -1.01
H3F3B-213ENST00000593254 FAT3Q8TDW7 4589 aa8.77□□□□□ -1.01
H3F3B-213ENST00000593254 IGLV5-52A0A0A0MRZ9 124 aa8.76□□□□□ -1.01
H3F3B-213ENST00000593254 TRAV8-3A0A0A6YYJ7 113 aa8.76□□□□□ -1.01
H3F3B-213ENST00000593254 KRTAP29-1A8MX34 341 aaPredicted RBP8.76□□□□□ -1.01
H3F3B-213ENST00000593254 OR5AL1P0C617 328 aa8.76□□□□□ -1.01
H3F3B-213ENST00000593254 UBE2D3P61077 147 aa8.76□□□□□ -1.01
H3F3B-213ENST00000593254 UBE2D2P62837 147 aa8.76□□□□□ -1.01
H3F3B-213ENST00000593254 RPL36AP83881 106 aaKnown RBP8.76□□□□□ -1.01
H3F3B-213ENST00000593254 PRR27Q6MZM9 219 aa8.76□□□□□ -1.01
H3F3B-213ENST00000593254 NIT1Q86X76 327 aa8.76□□□□□ -1.01
H3F3B-213ENST00000593254 OR10G8Q8NGN5 311 aa8.76□□□□□ -1.01
H3F3B-213ENST00000593254 RPL36ALQ969Q0 106 aaKnown RBP8.76□□□□□ -1.01
H3F3B-213ENST00000593254 TRBV7-3A0A075B6L6 115 aa8.75□□□□□ -1.01
H3F3B-213ENST00000593254 RAB4BP61018 213 aa8.75□□□□□ -1.01
H3F3B-213ENST00000593254 RBFOX3A6NFN3 312 aa8.74□□□□□ -1.01
H3F3B-213ENST00000593254 HAMPP81172 84 aa8.74□□□□□ -1.01
H3F3B-213ENST00000593254 WFDC2Q14508 124 aa8.74□□□□□ -1.01
H3F3B-213ENST00000593254 SERTAD4-AS1Q5TG53 156 aa8.74□□□□□ -1.01
H3F3B-213ENST00000593254 SPANXN1Q5VSR9 72 aa8.74□□□□□ -1.01
H3F3B-213ENST00000593254 ATRAIDQ6UW56 229 aa8.74□□□□□ -1.01
H3F3B-213ENST00000593254 NEXN-AS1Q8NBZ9 246 aa8.74□□□□□ -1.01
H3F3B-213ENST00000593254 CLRN3Q8NCR9 226 aa8.74□□□□□ -1.01
H3F3B-213ENST00000593254 CHCHD7Q9BUK0 85 aa8.74□□□□□ -1.01
H3F3B-213ENST00000593254 EIF5A2Q9GZV4 153 aaKnown RBP8.74□□□□□ -1.01
H3F3B-213ENST00000593254 URGCP-MRPS24S4R325 110 aa8.74□□□□□ -1.01
H3F3B-213ENST00000593254 MUC21A0A0G2JKD1 596 aa8.73□□□□□ -1.01
H3F3B-213ENST00000593254 MUC21A0A140T8X8 626 aa8.73□□□□□ -1.01
H3F3B-213ENST00000593254 IFNA1P01562 189 aa8.73□□□□□ -1.01
H3F3B-213ENST00000593254 IGLV2-8P01709 118 aa8.73□□□□□ -1.01
H3F3B-213ENST00000593254 MEF2BQ02080 365 aaPredicted RBP8.73□□□□□ -1.01
H3F3B-213ENST00000593254 RHEBQ15382 184 aa8.73□□□□□ -1.01
H3F3B-213ENST00000593254 ZNF56Q15929 161 aa8.73□□□□□ -1.01
H3F3B-213ENST00000593254 CENPWQ5EE01 88 aa8.73□□□□□ -1.01
H3F3B-213ENST00000593254 TMEM70Q9BUB7 260 aa8.73□□□□□ -1.01
H3F3B-213ENST00000593254 COX11Q9Y6N1 276 aa8.73□□□□□ -1.01
H3F3B-213ENST00000593254 C9JQL5 133 aa8.72□□□□□ -1.01
H3F3B-213ENST00000593254 SMIM12Q96EX1 92 aa8.72□□□□□ -1.01
H3F3B-213ENST00000593254 A0A087WX48 190 aa8.71□□□□□ -1.02
H3F3B-213ENST00000593254 TRBV6-8A0A0A6YYG3 113 aa8.71□□□□□ -1.02
H3F3B-213ENST00000593254 C19orf71A6NCJ1 209 aa8.71□□□□□ -1.02
H3F3B-213ENST00000593254 PDE6DO43924 150 aa8.71□□□□□ -1.02
H3F3B-213ENST00000593254 SRP19P09132 144 aaKnown RBP8.71□□□□□ -1.02
H3F3B-213ENST00000593254 IGLC6P0CF74 106 aa8.71□□□□□ -1.02
H3F3B-213ENST00000593254 BCL2P10415 239 aa8.71□□□□□ -1.02
H3F3B-213ENST00000593254 RMI2Q96E14 147 aa8.71□□□□□ -1.02
H3F3B-213ENST00000593254 DNAJC30Q96LL9 226 aa8.71□□□□□ -1.02
H3F3B-213ENST00000593254 AP1S3Q96PC3 154 aa8.71□□□□□ -1.02
H3F3B-213ENST00000593254 SMCO4Q9NRQ5 59 aa8.71□□□□□ -1.02
H3F3B-213ENST00000593254 KLK12Q9UKR0 248 aa8.71□□□□□ -1.02
H3F3B-213ENST00000593254 TMA7Q9Y2S6 64 aaKnown RBP8.71□□□□□ -1.02
H3F3B-213ENST00000593254 KIF25-AS1Q9Y6Z4 181 aa8.71□□□□□ -1.02
H3F3B-213ENST00000593254 TRBV20OR9-2A0A075B6H5 130 aa8.7□□□□□ -1.02
H3F3B-213ENST00000593254 LECT2O14960 151 aa8.7□□□□□ -1.02
H3F3B-213ENST00000593254 GZMBP10144 247 aa8.7□□□□□ -1.02
H3F3B-213ENST00000593254 GNG4P50150 75 aa8.7□□□□□ -1.02
H3F3B-213ENST00000593254 PNRC1Q12796 327 aaPredicted RBP8.7□□□□□ -1.02
H3F3B-213ENST00000593254 ELOBQ15370 118 aa8.7□□□□□ -1.02
H3F3B-213ENST00000593254 OR2D3Q8NGH3 330 aa8.7□□□□□ -1.02
H3F3B-213ENST00000593254 VAX2Q9UIW0 290 aa8.7□□□□□ -1.02
H3F3B-213ENST00000593254 IGKV2D-24A0A075B6R9 120 aa8.69□□□□□ -1.02
H3F3B-213ENST00000593254 F5H697 171 aa8.69□□□□□ -1.02
H3F3B-213ENST00000593254 SMIM17P0DL12 118 aa8.69□□□□□ -1.02
H3F3B-213ENST00000593254 RPS20P60866 119 aaKnown RBP8.69□□□□□ -1.02
H3F3B-213ENST00000593254 SSTP61278 116 aa8.69□□□□□ -1.02
H3F3B-213ENST00000593254 FAM74A3Q4VXF1 159 aa8.69□□□□□ -1.02
H3F3B-213ENST00000593254 KCNIP4Q6PIL6 250 aa8.69□□□□□ -1.02
H3F3B-213ENST00000593254 C15orf54Q8N8G6 183 aa8.69□□□□□ -1.02
H3F3B-213ENST00000593254 FER1L6-AS1Q8NA97 138 aa8.69□□□□□ -1.02
H3F3B-213ENST00000593254 BAALCQ8WXS3 180 aa8.69□□□□□ -1.02
H3F3B-213ENST00000593254 UBE2WQ96B02 151 aa8.69□□□□□ -1.02
H3F3B-213ENST00000593254 DAZAP1Q96EP5 407 aaKnown RBP8.69□□□□□ -1.02
H3F3B-213ENST00000593254 LOC105371267A0A1B0GV96 52 aa8.68□□□□□ -1.02
H3F3B-213ENST00000593254 TMEM250H0YL14 139 aa8.68□□□□□ -1.02
H3F3B-213ENST00000593254 Q0VG73 95 aa8.68□□□□□ -1.02
H3F3B-213ENST00000593254 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.68□□□□□ -1.02
H3F3B-213ENST00000593254 TPPP3Q9BW30 176 aa8.68□□□□□ -1.02
H3F3B-213ENST00000593254 FAM30AQ9NZY2 134 aa8.68□□□□□ -1.02
H3F3B-213ENST00000593254 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.67□□□□□ -1.02
H3F3B-213ENST00000593254 XKRY2A2RUG3 117 aa8.67□□□□□ -1.02
H3F3B-213ENST00000593254 TMEM262E9PQX1 116 aa8.67□□□□□ -1.02
H3F3B-213ENST00000593254 P01737 135 aa8.67□□□□□ -1.02
H3F3B-213ENST00000593254 CACNG7P62955 275 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms