RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 C11orf1Q9H5F2 150 aa3.02□□□□□ -1.93
SMAD4-216ENST00000593223 KIAA1109Q2LD37 5005 aa3.02□□□□□ -1.93
SMAD4-216ENST00000593223 TRGV5A0A0B4J1U4 118 aa3.01□□□□□ -1.93
SMAD4-216ENST00000593223 IGHV1-3A0A0C4DH29 117 aa3.01□□□□□ -1.93
SMAD4-216ENST00000593223 A0A0J9YW62 118 aa3.01□□□□□ -1.93
SMAD4-216ENST00000593223 GRIFINA4D1Z8 144 aa3.01□□□□□ -1.93
SMAD4-216ENST00000593223 TCL1BO95988 128 aa3.01□□□□□ -1.93
SMAD4-216ENST00000593223 IGHV1-46P01743 117 aa3.01□□□□□ -1.93
SMAD4-216ENST00000593223 IGHV3-7P01780 117 aa3.01□□□□□ -1.93
SMAD4-216ENST00000593223 HLA-DQA1P01909 254 aa3.01□□□□□ -1.93
SMAD4-216ENST00000593223 RBP4P02753 201 aa3.01□□□□□ -1.93
SMAD4-216ENST00000593223 IL7P13232 177 aa3.01□□□□□ -1.93
SMAD4-216ENST00000593223 CRISP3P54108 245 aa3.01□□□□□ -1.93
SMAD4-216ENST00000593223 RPL26P61254 145 aaKnown RBP3.01□□□□□ -1.93
SMAD4-216ENST00000593223 IQCJQ1A5X6 159 aa3.01□□□□□ -1.93
SMAD4-216ENST00000593223 OR2T2Q6IF00 324 aa3.01□□□□□ -1.93
SMAD4-216ENST00000593223 NOXRED1Q6NXP6 359 aa3.01□□□□□ -1.93
SMAD4-216ENST00000593223 PCP2Q8IVA1 136 aa3.01□□□□□ -1.93
SMAD4-216ENST00000593223 C15orf56Q8N910 161 aa3.01□□□□□ -1.93
SMAD4-216ENST00000593223 OTOSQ8NHW6 89 aa3.01□□□□□ -1.93
SMAD4-216ENST00000593223 ATG5Q9H1Y0 275 aa3.01□□□□□ -1.93
SMAD4-216ENST00000593223 CYTL1Q9NRR1 136 aa3.01□□□□□ -1.93
SMAD4-216ENST00000593223 TMEM106BQ9NUM4 274 aa3.01□□□□□ -1.93
SMAD4-216ENST00000593223 ARID1AO14497 2285 aa3.01□□□□□ -1.93
SMAD4-216ENST00000593223 DOCK4Q8N1I0 1966 aa3.01□□□□□ -1.93
SMAD4-216ENST00000593223 NCKAP5O14513 1909 aa3.01□□□□□ -1.93
SMAD4-216ENST00000593223 INTS1Q8N201 2190 aaKnown RBP3□□□□□ -1.93
SMAD4-216ENST00000593223 IGKV2D-24A0A075B6R9 120 aa3□□□□□ -1.93
SMAD4-216ENST00000593223 C17orf51A8MQB3 221 aa3□□□□□ -1.93
SMAD4-216ENST00000593223 MCRIP1C9JLW8 97 aa3□□□□□ -1.93
SMAD4-216ENST00000593223 C3orf84H3BNL1 204 aa3□□□□□ -1.93
SMAD4-216ENST00000593223 K7ERJ3 54 aa3□□□□□ -1.93
SMAD4-216ENST00000593223 M0R2P5 195 aa3□□□□□ -1.93
SMAD4-216ENST00000593223 HYPMO75409 117 aa3□□□□□ -1.93
SMAD4-216ENST00000593223 NPYP01303 97 aa3□□□□□ -1.93
SMAD4-216ENST00000593223 IGKV1-16P04430 117 aa3□□□□□ -1.93
SMAD4-216ENST00000593223 CCL3P10147 92 aa3□□□□□ -1.93
SMAD4-216ENST00000593223 TPT1P13693 172 aaKnown RBP3□□□□□ -1.93
SMAD4-216ENST00000593223 SLC25A16P16260 332 aa3□□□□□ -1.93
SMAD4-216ENST00000593223 HLA-DMBP28068 263 aa3□□□□□ -1.93
SMAD4-216ENST00000593223 TFF3Q07654 80 aa3□□□□□ -1.93
SMAD4-216ENST00000593223 ZNF705AQ6ZN79 300 aaPredicted RBP3□□□□□ -1.93
SMAD4-216ENST00000593223 Q6ZUT4 128 aa3□□□□□ -1.93
SMAD4-216ENST00000593223 C3orf56Q8N813 242 aa3□□□□□ -1.93
SMAD4-216ENST00000593223 S100A13Q99584 98 aa3□□□□□ -1.93
SMAD4-216ENST00000593223 GABARAPL1Q9H0R8 117 aa3□□□□□ -1.93
SMAD4-216ENST00000593223 LSM2Q9Y333 95 aaKnown RBP3□□□□□ -1.93
SMAD4-216ENST00000593223 PIKFYVEQ9Y2I7 2098 aa3□□□□□ -1.93
SMAD4-216ENST00000593223 TMEM223A0PJW6 202 aa2.99□□□□□ -1.93
SMAD4-216ENST00000593223 FAM24AA6NFZ4 105 aa2.99□□□□□ -1.93
SMAD4-216ENST00000593223 HCRTO43612 131 aa2.99□□□□□ -1.93
SMAD4-216ENST00000593223 SLC25A20O43772 301 aa2.99□□□□□ -1.93
SMAD4-216ENST00000593223 SH2D1AO60880 128 aa2.99□□□□□ -1.93
SMAD4-216ENST00000593223 IGHV1-69P01742 117 aa2.99□□□□□ -1.93
SMAD4-216ENST00000593223 CGB3P0DN86 165 aa2.99□□□□□ -1.93
SMAD4-216ENST00000593223 CGB7P0DN87 165 aa2.99□□□□□ -1.93
SMAD4-216ENST00000593223 CD28P10747 220 aa2.99□□□□□ -1.93
SMAD4-216ENST00000593223 ASB16-AS1Q495Z4 193 aa2.99□□□□□ -1.93
SMAD4-216ENST00000593223 FAM74A1Q5RGS3 127 aa2.99□□□□□ -1.93
SMAD4-216ENST00000593223 C10orf91Q5T1B1 145 aa2.99□□□□□ -1.93
SMAD4-216ENST00000593223 ZNF322Q6U7Q0 402 aaPredicted RBP2.99□□□□□ -1.93
SMAD4-216ENST00000593223 SIGLECL1Q8N7X8 197 aa2.99□□□□□ -1.93
SMAD4-216ENST00000593223 CNEP1R1Q8N9A8 125 aa2.99□□□□□ -1.93
SMAD4-216ENST00000593223 UPK3BQ9BT76 320 aa2.99□□□□□ -1.93
SMAD4-216ENST00000593223 RPL26L1Q9UNX3 145 aaKnown RBP2.99□□□□□ -1.93
SMAD4-216ENST00000593223 LINC00312Q9Y6C7 94 aa2.99□□□□□ -1.93
SMAD4-216ENST00000593223 DSCAML1Q8TD84 2053 aa2.99□□□□□ -1.93
SMAD4-216ENST00000593223 TRBV24-1A0A075B6N3 115 aa2.98□□□□□ -1.93
SMAD4-216ENST00000593223 M0R129 80 aa2.98□□□□□ -1.93
SMAD4-216ENST00000593223 GYPBP06028 91 aa2.98□□□□□ -1.93
SMAD4-216ENST00000593223 SAA1P0DJI8 122 aaPredicted RBP2.98□□□□□ -1.93
SMAD4-216ENST00000593223 SLC25A4P12235 298 aa2.98□□□□□ -1.93
SMAD4-216ENST00000593223 ZNF14P17017 642 aaPredicted RBP2.98□□□□□ -1.93
SMAD4-216ENST00000593223 Q0VG73 95 aa2.98□□□□□ -1.93
SMAD4-216ENST00000593223 MIAQ16674 131 aa2.98□□□□□ -1.93
SMAD4-216ENST00000593223 ZFP2Q6ZN57 461 aa2.98□□□□□ -1.93
SMAD4-216ENST00000593223 NTM-AS1Q6ZSK4 140 aa2.98□□□□□ -1.93
SMAD4-216ENST00000593223 Q8N2B8 174 aa2.98□□□□□ -1.93
SMAD4-216ENST00000593223 FAM216BQ8N7L0 139 aa2.98□□□□□ -1.93
SMAD4-216ENST00000593223 CLDND2Q8NHS1 167 aa2.98□□□□□ -1.93
SMAD4-216ENST00000593223 BCL2L10Q9HD36 194 aa2.98□□□□□ -1.93
SMAD4-216ENST00000593223 ZNRD1Q9P1U0 126 aa2.98□□□□□ -1.93
SMAD4-216ENST00000593223 TMEM14AQ9Y6G1 99 aa2.98□□□□□ -1.93
SMAD4-216ENST00000593223 ABCA1O95477 2261 aa2.97□□□□□ -1.93
SMAD4-216ENST00000593223 IGLV4-69A0A075B6H9 119 aa2.97□□□□□ -1.93
SMAD4-216ENST00000593223 A0A1W2PP18 115 aa2.97□□□□□ -1.93
SMAD4-216ENST00000593223 C7orf66A4D0T2 115 aa2.97□□□□□ -1.93
SMAD4-216ENST00000593223 H3BQ15 152 aa2.97□□□□□ -1.93
SMAD4-216ENST00000593223 OR1I1O60431 355 aa2.97□□□□□ -1.93
SMAD4-216ENST00000593223 CD3DP04234 171 aa2.97□□□□□ -1.93
SMAD4-216ENST00000593223 TLX1NBP0CAT3 122 aa2.97□□□□□ -1.93
SMAD4-216ENST00000593223 FABP4P15090 132 aa2.97□□□□□ -1.93
SMAD4-216ENST00000593223 NFYAP23511 347 aaPredicted RBP2.97□□□□□ -1.93
SMAD4-216ENST00000593223 CDK5R1Q15078 307 aa2.97□□□□□ -1.93
SMAD4-216ENST00000593223 PEA15Q15121 130 aa2.97□□□□□ -1.93
SMAD4-216ENST00000593223 PATE2Q6UY27 113 aa2.97□□□□□ -1.93
SMAD4-216ENST00000593223 ZNF720Q7Z2F6 126 aa2.97□□□□□ -1.93
SMAD4-216ENST00000593223 OR5AS1Q8N127 324 aa2.97□□□□□ -1.93
SMAD4-216ENST00000593223 LINC00471Q8N535 108 aa2.97□□□□□ -1.93
SMAD4-216ENST00000593223 Q8N976 141 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms