RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 UTP20O75691 2785 aaKnown RBP4□□□□□ -1.77
VMP1-215ENST00000592619 IGLV4-69A0A075B6H9 119 aa4□□□□□ -1.77
VMP1-215ENST00000592619 IGHV3-15A0A0B4J1V0 119 aa4□□□□□ -1.77
VMP1-215ENST00000592619 YPEL1O60688 119 aa4□□□□□ -1.77
VMP1-215ENST00000592619 UBL3O95164 117 aa4□□□□□ -1.77
VMP1-215ENST00000592619 ASAH2BP0C7U1 165 aa4□□□□□ -1.77
VMP1-215ENST00000592619 COX6B1P14854 86 aa4□□□□□ -1.77
VMP1-215ENST00000592619 COX7CP15954 63 aa4□□□□□ -1.77
VMP1-215ENST00000592619 SMIM11AP58511 58 aa4□□□□□ -1.77
VMP1-215ENST00000592619 HIST1H4AP62805 103 aaKnown RBP4□□□□□ -1.77
VMP1-215ENST00000592619 BSPH1Q075Z2 132 aa4□□□□□ -1.77
VMP1-215ENST00000592619 DAND5Q8N907 189 aa4□□□□□ -1.77
VMP1-215ENST00000592619 NPCDR1Q9BY65 106 aa4□□□□□ -1.77
VMP1-215ENST00000592619 XAGE1AQ9HD64 81 aa4□□□□□ -1.77
VMP1-215ENST00000592619 BAHCC1Q9P281 2608 aa4□□□□□ -1.77
VMP1-215ENST00000592619 CRYBG3Q68DQ2 2970 aa3.99□□□□□ -1.77
VMP1-215ENST00000592619 NBASA2RRP1 2371 aa3.99□□□□□ -1.77
VMP1-215ENST00000592619 MRPL33O75394 65 aaKnown RBP3.99□□□□□ -1.77
VMP1-215ENST00000592619 SNCGO76070 127 aa3.99□□□□□ -1.77
VMP1-215ENST00000592619 SLC25A6P12236 298 aa3.99□□□□□ -1.77
VMP1-215ENST00000592619 TPT1P13693 172 aaKnown RBP3.99□□□□□ -1.77
VMP1-215ENST00000592619 NPC2P61916 151 aa3.99□□□□□ -1.77
VMP1-215ENST00000592619 RPL18Q07020 188 aaKnown RBP3.99□□□□□ -1.77
VMP1-215ENST00000592619 CDK5R1Q15078 307 aa3.99□□□□□ -1.77
VMP1-215ENST00000592619 DEFB116Q30KQ4 102 aa3.99□□□□□ -1.77
VMP1-215ENST00000592619 Q8N9L7 120 aa3.99□□□□□ -1.77
VMP1-215ENST00000592619 EPDR1Q9UM22 224 aa3.99□□□□□ -1.77
VMP1-215ENST00000592619 FASNP49327 2511 aaKnown RBP3.99□□□□□ -1.77
VMP1-215ENST00000592619 LRRK2Q5S007 2527 aa3.99□□□□□ -1.77
VMP1-215ENST00000592619 CSMD2Q7Z408 3487 aa3.99□□□□□ -1.77
VMP1-215ENST00000592619 MED12Q93074 2177 aa3.99□□□□□ -1.77
VMP1-215ENST00000592619 MYO7BQ6PIF6 2116 aa3.98□□□□□ -1.77
VMP1-215ENST00000592619 CACNA1CQ13936 2221 aa3.98□□□□□ -1.77
VMP1-215ENST00000592619 MPDZO75970 2070 aa3.98□□□□□ -1.77
VMP1-215ENST00000592619 A0A087WXM4 84 aa3.98□□□□□ -1.77
VMP1-215ENST00000592619 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.98□□□□□ -1.77
VMP1-215ENST00000592619 K7ERJ3 54 aa3.98□□□□□ -1.77
VMP1-215ENST00000592619 HYPMO75409 117 aa3.98□□□□□ -1.77
VMP1-215ENST00000592619 CFDP00746 253 aaPredicted RBP3.98□□□□□ -1.77
VMP1-215ENST00000592619 CD3DP04234 171 aa3.98□□□□□ -1.77
VMP1-215ENST00000592619 SLC25A26Q70HW3 274 aa3.98□□□□□ -1.77
VMP1-215ENST00000592619 KRTAP11-1Q8IUC1 163 aa3.98□□□□□ -1.77
VMP1-215ENST00000592619 PFN4Q8NHR9 129 aa3.98□□□□□ -1.77
VMP1-215ENST00000592619 FGF23Q9GZV9 251 aaPredicted RBP3.98□□□□□ -1.77
VMP1-215ENST00000592619 OSTCQ9NRP0 149 aa3.98□□□□□ -1.77
VMP1-215ENST00000592619 CELSR2Q9HCU4 2923 aa3.98□□□□□ -1.77
VMP1-215ENST00000592619 CHD3Q12873 2000 aaKnown RBP3.98□□□□□ -1.77
VMP1-215ENST00000592619 TET2Q6N021 2002 aaPredicted RBP3.98□□□□□ -1.77
VMP1-215ENST00000592619 RP1L1Q8IWN7 2480 aaPredicted RBP3.98□□□□□ -1.77
VMP1-215ENST00000592619 USP9YO00507 2555 aaPredicted RBP3.98□□□□□ -1.77
VMP1-215ENST00000592619 DCHS2Q6V1P9 2916 aa3.98□□□□□ -1.77
VMP1-215ENST00000592619 INTS1Q8N201 2190 aaKnown RBP3.97□□□□□ -1.77
VMP1-215ENST00000592619 DIDO1Q9BTC0 2240 aaKnown RBP3.97□□□□□ -1.77
VMP1-215ENST00000592619 IGHV3-43A0A0B4J1X8 118 aa3.97□□□□□ -1.77
VMP1-215ENST00000592619 H3BRM9 83 aa3.97□□□□□ -1.77
VMP1-215ENST00000592619 M0R233 179 aa3.97□□□□□ -1.77
VMP1-215ENST00000592619 IGKV1-16P04430 117 aa3.97□□□□□ -1.77
VMP1-215ENST00000592619 SEC11AP67812 179 aa3.97□□□□□ -1.77
VMP1-215ENST00000592619 Q6P435 159 aa3.97□□□□□ -1.77
VMP1-215ENST00000592619 DPPA3Q6W0C5 159 aa3.97□□□□□ -1.77
VMP1-215ENST00000592619 HEPN1Q6WQI6 88 aa3.97□□□□□ -1.77
VMP1-215ENST00000592619 VSTM2AQ8TAG5 236 aa3.97□□□□□ -1.77
VMP1-215ENST00000592619 IMMP2LQ96T52 175 aa3.97□□□□□ -1.77
VMP1-215ENST00000592619 CSMD1Q96PZ7 3565 aa3.97□□□□□ -1.77
VMP1-215ENST00000592619 FBN2P35556 2912 aa3.96□□□□□ -1.78
VMP1-215ENST00000592619 PTPN13Q12923 2485 aa3.96□□□□□ -1.78
VMP1-215ENST00000592619 IGHV7-4-1A0A0J9YVY3 117 aa3.96□□□□□ -1.78
VMP1-215ENST00000592619 RBAKDNA6NC62 111 aa3.96□□□□□ -1.78
VMP1-215ENST00000592619 A8MWL6 223 aa3.96□□□□□ -1.78
VMP1-215ENST00000592619 LEPROTO15243 131 aa3.96□□□□□ -1.78
VMP1-215ENST00000592619 HLA-DQA1P01909 254 aa3.96□□□□□ -1.78
VMP1-215ENST00000592619 NPPCP23582 126 aa3.96□□□□□ -1.78
VMP1-215ENST00000592619 ADIRFQ15847 76 aa3.96□□□□□ -1.78
VMP1-215ENST00000592619 FAM104BQ5XKR9 115 aa3.96□□□□□ -1.78
VMP1-215ENST00000592619 NTM-AS1Q6ZSK4 140 aa3.96□□□□□ -1.78
VMP1-215ENST00000592619 FP248Q71RG6 208 aaPredicted RBP3.96□□□□□ -1.78
VMP1-215ENST00000592619 SPATA12Q7Z6I5 190 aa3.96□□□□□ -1.78
VMP1-215ENST00000592619 SBSPONQ8IVN8 264 aa3.96□□□□□ -1.78
VMP1-215ENST00000592619 C15orf53Q8NAA6 179 aa3.96□□□□□ -1.78
VMP1-215ENST00000592619 LINC01560Q8TB33 94 aa3.96□□□□□ -1.78
VMP1-215ENST00000592619 MUCL1Q96DR8 90 aa3.96□□□□□ -1.78
VMP1-215ENST00000592619 S100A16Q96FQ6 103 aaKnown RBP3.96□□□□□ -1.78
VMP1-215ENST00000592619 ZNF714Q96N38 554 aa3.96□□□□□ -1.78
VMP1-215ENST00000592619 DPH3P1Q9H4G8 78 aa3.96□□□□□ -1.78
VMP1-215ENST00000592619 ST20Q9HBF5 79 aa3.96□□□□□ -1.78
VMP1-215ENST00000592619 AKAP9Q99996 3911 aa3.96□□□□□ -1.78
VMP1-215ENST00000592619 DOPEY2Q9Y3R5 2298 aa3.96□□□□□ -1.78
VMP1-215ENST00000592619 GNGT2O14610 69 aa3.95□□□□□ -1.78
VMP1-215ENST00000592619 IGLC2P0DOY2 106 aa3.95□□□□□ -1.78
VMP1-215ENST00000592619 IGLC3P0DOY3 106 aa3.95□□□□□ -1.78
VMP1-215ENST00000592619 C10orf128Q5T292 105 aa3.95□□□□□ -1.78
VMP1-215ENST00000592619 MIR17HGQ75NE6 70 aa3.95□□□□□ -1.78
VMP1-215ENST00000592619 C3orf56Q8N813 242 aa3.95□□□□□ -1.78
VMP1-215ENST00000592619 C8orf17Q9NRJ1 99 aa3.95□□□□□ -1.78
VMP1-215ENST00000592619 CACFD1Q9UGQ2 172 aa3.95□□□□□ -1.78
VMP1-215ENST00000592619 ICE1Q9Y2F5 2266 aa3.95□□□□□ -1.78
VMP1-215ENST00000592619 HRNRQ86YZ3 2850 aaPredicted RBP3.94□□□□□ -1.78
VMP1-215ENST00000592619 SPTAN1Q13813 2472 aaKnown RBP3.94□□□□□ -1.78
VMP1-215ENST00000592619 DEFB108AA8MXU0 73 aa3.94□□□□□ -1.78
VMP1-215ENST00000592619 TCL1BO95988 128 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 573.7 ms