RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 UBE2D3P61077 147 aa6.83□□□□□ -1.32
BRCA1-227ENST00000591849 UBE2D2P62837 147 aa6.83□□□□□ -1.32
BRCA1-227ENST00000591849 ADIRFQ15847 76 aa6.83□□□□□ -1.32
BRCA1-227ENST00000591849 OR10G8Q8NGN5 311 aa6.83□□□□□ -1.32
BRCA1-227ENST00000591849 Q9HAA7 133 aa6.83□□□□□ -1.32
BRCA1-227ENST00000591849 A0A087WX48 190 aa6.82□□□□□ -1.32
BRCA1-227ENST00000591849 IBA57-AS1B1ANH7 110 aa6.82□□□□□ -1.32
BRCA1-227ENST00000591849 CTRLP40313 264 aa6.82□□□□□ -1.32
BRCA1-227ENST00000591849 TMEM97Q5BJF2 176 aa6.82□□□□□ -1.32
BRCA1-227ENST00000591849 LINC01551Q86U37 167 aa6.82□□□□□ -1.32
BRCA1-227ENST00000591849 DNAJC30Q96LL9 226 aa6.82□□□□□ -1.32
BRCA1-227ENST00000591849 SMDT1Q9H4I9 107 aa6.82□□□□□ -1.32
BRCA1-227ENST00000591849 NAT8Q9UHE5 227 aa6.82□□□□□ -1.32
BRCA1-227ENST00000591849 KIF25-AS1Q9Y6Z4 181 aa6.82□□□□□ -1.32
BRCA1-227ENST00000591849 C16orf90A8MZG2 172 aa6.81□□□□□ -1.32
BRCA1-227ENST00000591849 ELOBQ15370 118 aa6.81□□□□□ -1.32
BRCA1-227ENST00000591849 CT83Q5H943 113 aa6.81□□□□□ -1.32
BRCA1-227ENST00000591849 SUMO4Q6EEV6 95 aa6.81□□□□□ -1.32
BRCA1-227ENST00000591849 RASL11AQ6T310 242 aa6.81□□□□□ -1.32
BRCA1-227ENST00000591849 SPATA12Q7Z6I5 190 aa6.81□□□□□ -1.32
BRCA1-227ENST00000591849 DAZ4Q86SG3 579 aaKnown RBP6.81□□□□□ -1.32
BRCA1-227ENST00000591849 CHCHD5Q9BSY4 110 aa6.81□□□□□ -1.32
BRCA1-227ENST00000591849 TM2D2Q9BX73 214 aa6.81□□□□□ -1.32
BRCA1-227ENST00000591849 DAZ3Q9NR90 486 aaKnown RBP6.81□□□□□ -1.32
BRCA1-227ENST00000591849 OSTCQ9NRP0 149 aa6.81□□□□□ -1.32
BRCA1-227ENST00000591849 TRBV6-8A0A0A6YYG3 113 aa6.8□□□□□ -1.32
BRCA1-227ENST00000591849 TRAV8-3A0A0A6YYJ7 113 aa6.8□□□□□ -1.32
BRCA1-227ENST00000591849 M0QY20 66 aa6.8□□□□□ -1.32
BRCA1-227ENST00000591849 PKIAP61925 76 aa6.8□□□□□ -1.32
BRCA1-227ENST00000591849 SRSF3P84103 164 aaKnown RBP6.8□□□□□ -1.32
BRCA1-227ENST00000591849 NIT1Q86X76 327 aa6.8□□□□□ -1.32
BRCA1-227ENST00000591849 TSKUQ8WUA8 353 aa6.8□□□□□ -1.32
BRCA1-227ENST00000591849 GTSF1Q8WW33 167 aa6.8□□□□□ -1.32
BRCA1-227ENST00000591849 RYR1P21817 5038 aa6.79□□□□□ -1.32
BRCA1-227ENST00000591849 A0A1B0GUT8 65 aa6.79□□□□□ -1.32
BRCA1-227ENST00000591849 HIGD1CA8MV81 97 aa6.79□□□□□ -1.32
BRCA1-227ENST00000591849 C9JQL5 133 aa6.79□□□□□ -1.32
BRCA1-227ENST00000591849 RPL23P62829 140 aaKnown RBP6.79□□□□□ -1.32
BRCA1-227ENST00000591849 RIGQ13278 110 aa6.79□□□□□ -1.32
BRCA1-227ENST00000591849 RMI2Q96E14 147 aa6.79□□□□□ -1.32
BRCA1-227ENST00000591849 CNFNQ9BYD5 112 aa6.79□□□□□ -1.32
BRCA1-227ENST00000591849 GFRA4Q9GZZ7 299 aa6.79□□□□□ -1.32
BRCA1-227ENST00000591849 NIT2Q9NQR4 276 aa6.79□□□□□ -1.32
BRCA1-227ENST00000591849 KLK12Q9UKR0 248 aa6.79□□□□□ -1.32
BRCA1-227ENST00000591849 DNAH17Q9UFH2 4485 aa6.78□□□□□ -1.32
BRCA1-227ENST00000591849 TRBV25-1A0A075B6N4 114 aa6.78□□□□□ -1.32
BRCA1-227ENST00000591849 IGHV1-24A0A0C4DH33 117 aa6.78□□□□□ -1.32
BRCA1-227ENST00000591849 FAM231BA6NCW3 169 aa6.78□□□□□ -1.32
BRCA1-227ENST00000591849 FOXA3P55318 350 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-227ENST00000591849 LAGE3Q14657 143 aa6.78□□□□□ -1.32
BRCA1-227ENST00000591849 NDUFA5Q16718 116 aa6.78□□□□□ -1.32
BRCA1-227ENST00000591849 Q6ZRN7 208 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-227ENST00000591849 Q8N3U1 123 aa6.78□□□□□ -1.32
BRCA1-227ENST00000591849 ISOC2Q96AB3 205 aa6.78□□□□□ -1.32
BRCA1-227ENST00000591849 CHCHD7Q9BUK0 85 aa6.78□□□□□ -1.32
BRCA1-227ENST00000591849 FAT2Q9NYQ8 4349 aa6.77□□□□□ -1.33
BRCA1-227ENST00000591849 CRPP02741 224 aa6.77□□□□□ -1.33
BRCA1-227ENST00000591849 GAGE6Q13070 117 aa6.77□□□□□ -1.33
BRCA1-227ENST00000591849 COTL1Q14019 142 aa6.77□□□□□ -1.33
BRCA1-227ENST00000591849 UBE2WQ96B02 151 aa6.77□□□□□ -1.33
BRCA1-227ENST00000591849 PGPEP1Q9NXJ5 209 aa6.77□□□□□ -1.33
BRCA1-227ENST00000591849 NAT8BQ9UHF3 227 aa6.77□□□□□ -1.33
BRCA1-227ENST00000591849 COX11Q9Y6N1 276 aa6.77□□□□□ -1.33
BRCA1-227ENST00000591849 V9GYV3 84 aa6.77□□□□□ -1.33
BRCA1-227ENST00000591849 IGKV2D-24A0A075B6R9 120 aa6.76□□□□□ -1.33
BRCA1-227ENST00000591849 A0A087WTM6 91 aa6.76□□□□□ -1.33
BRCA1-227ENST00000591849 TRAV26-2A0A0B4J265 109 aa6.76□□□□□ -1.33
BRCA1-227ENST00000591849 UBE2L6O14933 153 aa6.76□□□□□ -1.33
BRCA1-227ENST00000591849 ANGP03950 147 aaKnown RBP6.76□□□□□ -1.33
BRCA1-227ENST00000591849 IFITM2Q01629 132 aa6.76□□□□□ -1.33
BRCA1-227ENST00000591849 Q0VG73 95 aa6.76□□□□□ -1.33
BRCA1-227ENST00000591849 GATD1Q8NB37 220 aa6.76□□□□□ -1.33
BRCA1-227ENST00000591849 FRZBQ92765 325 aa6.76□□□□□ -1.33
BRCA1-227ENST00000591849 TMEM243Q9BU79 118 aa6.76□□□□□ -1.33
BRCA1-227ENST00000591849 DNAH2Q9P225 4427 aa6.75□□□□□ -1.33
BRCA1-227ENST00000591849 PMCHP20382 165 aa6.75□□□□□ -1.33
BRCA1-227ENST00000591849 AMTP48728 403 aa6.75□□□□□ -1.33
BRCA1-227ENST00000591849 ATRAIDQ6UW56 229 aa6.75□□□□□ -1.33
BRCA1-227ENST00000591849 NTM-AS1Q6ZSK4 140 aa6.75□□□□□ -1.33
BRCA1-227ENST00000591849 NUP35Q8NFH5 326 aa6.75□□□□□ -1.33
BRCA1-227ENST00000591849 DEFB104AQ8WTQ1 72 aa6.75□□□□□ -1.33
BRCA1-227ENST00000591849 PPP1R2P9O14990 202 aa6.74□□□□□ -1.33
BRCA1-227ENST00000591849 KRTAP10-2P60368 255 aa6.74□□□□□ -1.33
BRCA1-227ENST00000591849 IQCJQ1A5X6 159 aa6.74□□□□□ -1.33
BRCA1-227ENST00000591849 MPV17L2Q567V2 206 aa6.74□□□□□ -1.33
BRCA1-227ENST00000591849 CLLU1Q5K131 121 aa6.74□□□□□ -1.33
BRCA1-227ENST00000591849 RPL39LQ96EH5 51 aaKnown RBP6.74□□□□□ -1.33
BRCA1-227ENST00000591849 TMEM191AQ9H0A3 160 aa6.74□□□□□ -1.33
BRCA1-227ENST00000591849 A0A1B0GW15 77 aa6.73□□□□□ -1.33
BRCA1-227ENST00000591849 SMIM27A0A1W2PRY6 76 aa6.73□□□□□ -1.33
BRCA1-227ENST00000591849 S100A8P05109 93 aa6.73□□□□□ -1.33
BRCA1-227ENST00000591849 FUSP35637 526 aaKnown RBP eCLIP6.73□□□□□ -1.33
BRCA1-227ENST00000591849 CAMPP49913 170 aa6.73□□□□□ -1.33
BRCA1-227ENST00000591849 RBX1P62877 108 aa6.73□□□□□ -1.33
BRCA1-227ENST00000591849 AMMECR1LQ6DCA0 310 aa6.73□□□□□ -1.33
BRCA1-227ENST00000591849 CDPF1Q6NVV7 123 aa6.73□□□□□ -1.33
BRCA1-227ENST00000591849 Q8N976 141 aa6.73□□□□□ -1.33
BRCA1-227ENST00000591849 C1orf43Q9BWL3 253 aa6.73□□□□□ -1.33
BRCA1-227ENST00000591849 ST20Q9HBF5 79 aa6.73□□□□□ -1.33
BRCA1-227ENST00000591849 IGLV5-52A0A0A0MRZ9 124 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms