RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 C14orf178Q8N769 122 aaPredicted RBP9.24□□□□□ -0.93
SMARCA4-217ENST00000591595 C20orf173Q96LM9 149 aa9.24□□□□□ -0.93
SMARCA4-217ENST00000591595 PSMB8P28062 276 aa9.24□□□□□ -0.93
SMARCA4-217ENST00000591595 TP53TG1Q9Y2A0 90 aa9.24□□□□□ -0.93
SMARCA4-217ENST00000591595 TRAV12-2A0A075B6T6 113 aa9.23□□□□□ -0.93
SMARCA4-217ENST00000591595 IGHV3OR16-13A0A075B7E8 117 aa9.23□□□□□ -0.93
SMARCA4-217ENST00000591595 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.23□□□□□ -0.93
SMARCA4-217ENST00000591595 IGHV3-74A0A0B4J1X5 117 aa9.23□□□□□ -0.93
SMARCA4-217ENST00000591595 Q8NA96 180 aa9.23□□□□□ -0.93
SMARCA4-217ENST00000591595 ZNF292O60281 2723 aa9.23□□□□□ -0.93
SMARCA4-217ENST00000591595 IGHV3-66A0A0C4DH42 116 aa9.23□□□□□ -0.93
SMARCA4-217ENST00000591595 FANCD2OSQ96PS1 177 aa9.23□□□□□ -0.93
SMARCA4-217ENST00000591595 COX6CP09669 75 aa9.23□□□□□ -0.93
SMARCA4-217ENST00000591595 SDIM1Q6ZPB5 146 aa9.23□□□□□ -0.93
SMARCA4-217ENST00000591595 TMEM223A0PJW6 202 aa9.22□□□□□ -0.93
SMARCA4-217ENST00000591595 CLEC2BQ92478 149 aa9.22□□□□□ -0.93
SMARCA4-217ENST00000591595 LRBAP50851 2863 aa9.22□□□□□ -0.93
SMARCA4-217ENST00000591595 GRNP28799 593 aaKnown RBP9.22□□□□□ -0.93
SMARCA4-217ENST00000591595 ZNF80P51504 273 aaPredicted RBP9.22□□□□□ -0.93
SMARCA4-217ENST00000591595 FHL2Q14192 279 aa9.22□□□□□ -0.93
SMARCA4-217ENST00000591595 COL6A6A6NMZ7 2263 aa9.21□□□□□ -0.93
SMARCA4-217ENST00000591595 NDPQ00604 133 aa9.21□□□□□ -0.93
SMARCA4-217ENST00000591595 C16orf95Q9H693 158 aa9.21□□□□□ -0.93
SMARCA4-217ENST00000591595 IGLV11-55A0A075B6I3 123 aa9.21□□□□□ -0.94
SMARCA4-217ENST00000591595 TSPEAR-AS2P59090 65 aa9.21□□□□□ -0.94
SMARCA4-217ENST00000591595 ERCC8Q13216 396 aa9.21□□□□□ -0.94
SMARCA4-217ENST00000591595 ECSCRQ19T08 205 aa9.21□□□□□ -0.94
SMARCA4-217ENST00000591595 ICOSQ9Y6W8 199 aa9.21□□□□□ -0.94
SMARCA4-217ENST00000591595 TRAV8-3A0A0A6YYJ7 113 aa9.21□□□□□ -0.94
SMARCA4-217ENST00000591595 MUSTN1Q8IVN3 82 aa9.21□□□□□ -0.94
SMARCA4-217ENST00000591595 IGHV3-49A0A0A0MS15 119 aa9.2□□□□□ -0.94
SMARCA4-217ENST00000591595 NDUFC2-KCTD14E9PQ53 114 aa9.2□□□□□ -0.94
SMARCA4-217ENST00000591595 LINC00482Q8N8I6 264 aa9.2□□□□□ -0.94
SMARCA4-217ENST00000591595 LST1O00453 97 aa9.2□□□□□ -0.94
SMARCA4-217ENST00000591595 SERP1Q9Y6X1 66 aa9.2□□□□□ -0.94
SMARCA4-217ENST00000591595 CSMD1Q96PZ7 3565 aa9.2□□□□□ -0.94
SMARCA4-217ENST00000591595 EPM2AB3EWF7 344 aa9.2□□□□□ -0.94
SMARCA4-217ENST00000591595 NDUFC2O95298 119 aa9.2□□□□□ -0.94
SMARCA4-217ENST00000591595 PTPRQQ9UMZ3 2332 aa9.19□□□□□ -0.94
SMARCA4-217ENST00000591595 SPTAN1Q13813 2472 aaKnown RBP9.19□□□□□ -0.94
SMARCA4-217ENST00000591595 C11orf86A6NJI1 115 aa9.19□□□□□ -0.94
SMARCA4-217ENST00000591595 RNF182Q8N6D2 247 aa9.19□□□□□ -0.94
SMARCA4-217ENST00000591595 TRAV26-2A0A0B4J265 109 aa9.19□□□□□ -0.94
SMARCA4-217ENST00000591595 C9orf139Q6ZV77 190 aa9.19□□□□□ -0.94
SMARCA4-217ENST00000591595 NRACQ8N912 160 aa9.19□□□□□ -0.94
SMARCA4-217ENST00000591595 TOMM6Q96B49 74 aa9.19□□□□□ -0.94
SMARCA4-217ENST00000591595 MUC6Q6W4X9 2439 aa9.19□□□□□ -0.94
SMARCA4-217ENST00000591595 CTSGP08311 255 aa9.18□□□□□ -0.94
SMARCA4-217ENST00000591595 UBE2E1P51965 193 aa9.18□□□□□ -0.94
SMARCA4-217ENST00000591595 NPBQ8NG41 125 aa9.18□□□□□ -0.94
SMARCA4-217ENST00000591595 DCANP1Q8TF63 244 aa9.18□□□□□ -0.94
SMARCA4-217ENST00000591595 TMEM243Q9BU79 118 aa9.18□□□□□ -0.94
SMARCA4-217ENST00000591595 TIMM21Q9BVV7 248 aa9.18□□□□□ -0.94
SMARCA4-217ENST00000591595 CNFNQ9BYD5 112 aa9.18□□□□□ -0.94
SMARCA4-217ENST00000591595 FAM19A1Q7Z5A9 133 aa9.18□□□□□ -0.94
SMARCA4-217ENST00000591595 DYNAPQ8N1N2 210 aa9.18□□□□□ -0.94
SMARCA4-217ENST00000591595 RETNQ9HD89 108 aa9.18□□□□□ -0.94
SMARCA4-217ENST00000591595 ATRXP46100 2492 aa9.18□□□□□ -0.94
SMARCA4-217ENST00000591595 F8W735 103 aaPredicted RBP9.18□□□□□ -0.94
SMARCA4-217ENST00000591595 PRSS2P07478 247 aa9.18□□□□□ -0.94
SMARCA4-217ENST00000591595 VMO1Q7Z5L0 202 aa9.18□□□□□ -0.94
SMARCA4-217ENST00000591595 NACAE9PAV3 2078 aa9.18□□□□□ -0.94
SMARCA4-217ENST00000591595 PRAC2D3DTV9 90 aa9.17□□□□□ -0.94
SMARCA4-217ENST00000591595 C15orf32Q32M92 178 aa9.17□□□□□ -0.94
SMARCA4-217ENST00000591595 ORMDL2Q53FV1 153 aa9.17□□□□□ -0.94
SMARCA4-217ENST00000591595 FAM223AQ8IWN6 122 aa9.17□□□□□ -0.94
SMARCA4-217ENST00000591595 LGALS3P17931 250 aaKnown RBP9.17□□□□□ -0.94
SMARCA4-217ENST00000591595 AMELXQ99217 191 aa9.17□□□□□ -0.94
SMARCA4-217ENST00000591595 SMAD5-AS1Q9Y6J3 95 aa9.16□□□□□ -0.94
SMARCA4-217ENST00000591595 CCL21O00585 134 aa9.16□□□□□ -0.94
SMARCA4-217ENST00000591595 LY6G5BQ8NDX9 201 aa9.16□□□□□ -0.94
SMARCA4-217ENST00000591595 RELNP78509 3460 aa9.16□□□□□ -0.94
SMARCA4-217ENST00000591595 FP248Q71RG6 208 aaPredicted RBP9.16□□□□□ -0.94
SMARCA4-217ENST00000591595 SMIM2Q9BVW6 85 aa9.16□□□□□ -0.94
SMARCA4-217ENST00000591595 SMIM26A0A096LP01 95 aa9.15□□□□□ -0.94
SMARCA4-217ENST00000591595 USP17L23D6RBM5 183 aa9.15□□□□□ -0.94
SMARCA4-217ENST00000591595 PAPPA-AS1Q5QFB9 102 aa9.15□□□□□ -0.94
SMARCA4-217ENST00000591595 CLEC19AQ6UXS0 136 aa9.15□□□□□ -0.94
SMARCA4-217ENST00000591595 TRGV3P03979 118 aa9.15□□□□□ -0.94
SMARCA4-217ENST00000591595 CIRBPQ14011 172 aaKnown RBP9.15□□□□□ -0.94
SMARCA4-217ENST00000591595 C2orf66Q6UXQ4 117 aa9.15□□□□□ -0.94
SMARCA4-217ENST00000591595 M0R1W7 72 aa9.15□□□□□ -0.95
SMARCA4-217ENST00000591595 SPANXN1Q5VSR9 72 aa9.15□□□□□ -0.95
SMARCA4-217ENST00000591595 IGF2RP11717 2491 aa9.14□□□□□ -0.95
SMARCA4-217ENST00000591595 IGLV4-69A0A075B6H9 119 aa9.14□□□□□ -0.95
SMARCA4-217ENST00000591595 IGHV7-81A0A0B4J1V7 117 aa9.14□□□□□ -0.95
SMARCA4-217ENST00000591595 A0A087WVE0 104 aa9.13□□□□□ -0.95
SMARCA4-217ENST00000591595 ODF3BA8MYP8 253 aa9.13□□□□□ -0.95
SMARCA4-217ENST00000591595 TIRAPP58753 221 aa9.13□□□□□ -0.95
SMARCA4-217ENST00000591595 ZNF575Q86XF7 245 aa9.13□□□□□ -0.95
SMARCA4-217ENST00000591595 SLC50A1Q9BRV3 221 aa9.12□□□□□ -0.95
SMARCA4-217ENST00000591595 DCHS2Q6V1P9 2916 aa9.12□□□□□ -0.95
SMARCA4-217ENST00000591595 IGKV3D-7A0A0C4DH55 119 aa9.12□□□□□ -0.95
SMARCA4-217ENST00000591595 G3V318 75 aa9.12□□□□□ -0.95
SMARCA4-217ENST00000591595 ASH1LQ9NR48 2969 aaKnown RBP9.12□□□□□ -0.95
SMARCA4-217ENST00000591595 PRRC2AP48634 2157 aaKnown RBP9.12□□□□□ -0.95
SMARCA4-217ENST00000591595 TMEM89A2RUT3 159 aa9.12□□□□□ -0.95
SMARCA4-217ENST00000591595 FAM223BA6NKX1 122 aa9.12□□□□□ -0.95
SMARCA4-217ENST00000591595 I3L3M4 83 aa9.12□□□□□ -0.95
SMARCA4-217ENST00000591595 BUB3O43684 328 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 2598 ms